AT3G44590 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT3G44590
Description 60S acidic ribosomal protein family
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G44590 60S acidic ribosomal protein family 1 0.3 -0.33
2 AT2G36170 Ubiquitin supergroup;Ribosomal protein L40e 0.91 0.32 -0.32
3 AT3G55280 ribosomal protein L23AB RIBOSOMAL PROTEIN L23A2, ribosomal
protein L23AB		 0.89 0.31 -0.32
4 AT1G07070 Ribosomal protein L35Ae family protein 0.89 0.32 -0.34
5 AT3G07110 Ribosomal protein L13 family protein 0.89 0.3 -0.34
6 AT1G48630 receptor for activated C kinase 1B receptor for activated C kinase
1B, receptor for activated C
kinase 1B		 0.89 0.3 -0.31
7 AT1G29250 Alba DNA/RNA-binding protein 0.88 0.32 -0.31
8 AT2G36620 ribosomal protein L24 ribosomal protein L24 0.88 0.32 -0.3
9 AT1G54690 gamma histone variant H2AX GAMMA H2AX, gamma histone variant
H2AX, H2AXB, histone H2A 3		 0.87 0.32 -0.34
10 AT4G10480 Nascent polypeptide-associated complex (NAC), alpha subunit
family protein		 0.87 0.32 -0.31
11 AT1G26910 Ribosomal protein L16p/L10e family protein ribosomal protein L10 B 0.87 0.32 -0.34
12 AT3G06610 DNA-binding enhancer protein-related 0.86 0.32 -0.32
13 AT5G56710 Ribosomal protein L31e family protein 0.86 0.31 -0.31
14 AT2G45730 eukaryotic initiation factor 3 gamma subunit family protein 0.86 0.3 -0.34
15 AT2G47610 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.86 0.32 -0.32
16 AT3G16780 Ribosomal protein L19e family protein 0.86 0.29 -0.33
17 AT4G25890 60S acidic ribosomal protein family 0.85 0.3 -0.31
18 AT1G27400 Ribosomal protein L22p/L17e family protein 0.85 0.28 -0.32
19 AT4G34555 Ribosomal protein S25 family protein 0.85 0.32 -0.31
20 AT1G52300 Zinc-binding ribosomal protein family protein 0.85 0.34 -0.31
21 AT1G72370 40s ribosomal protein SA AP40, 40s ribosomal protein SA,
RP40, RPSAA		 0.85 0.33 -0.32
22 AT3G28900 Ribosomal protein L34e superfamily protein 0.85 0.31 -0.3
23 AT3G53020 Ribosomal protein L24e family protein RIBOSOMAL PROTEIN L24, RPL24B,
SHORT VALVE1		 0.85 0.31 -0.3
24 AT5G15520 Ribosomal protein S19e family protein 0.84 0.3 -0.32
25 AT1G73230 Nascent polypeptide-associated complex NAC 0.84 0.31 -0.31
26 AT3G26380 Melibiase family protein -0.84 0.33 -0.32
27 AT1G07370 proliferating cellular nuclear antigen 1 PROLIFERATING CELLULAR NUCLEAR
ANTIGEN 1, proliferating cellular
nuclear antigen 1		 0.84 0.31 -0.31
28 AT3G03960 TCP-1/cpn60 chaperonin family protein 0.84 0.32 -0.32
29 AT5G47700 60S acidic ribosomal protein family 0.83 0.32 -0.31
30 AT3G11510 Ribosomal protein S11 family protein 0.83 0.31 -0.33
31 AT3G04770 40s ribosomal protein SA B 40s ribosomal protein SA B 0.83 0.32 -0.32
32 AT1G42470 Patched family protein -0.83 0.33 -0.32
33 AT3G05590 ribosomal protein L18 ribosomal protein L18 0.83 0.34 -0.33
34 AT2G37190 Ribosomal protein L11 family protein 0.83 0.32 -0.32
35 AT1G01100 60S acidic ribosomal protein family 0.83 0.3 -0.31
36 AT3G18130 receptor for activated C kinase 1C receptor for activated C kinase
1C, receptor for activated C
kinase 1C		 0.83 0.33 -0.33
37 AT2G25625 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED
DURING: LP.06 six leaves visible, LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage; Has 24 Blast hits to 24 proteins in 9 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.82 0.3 -0.34
38 AT3G11250 Ribosomal protein L10 family protein 0.82 0.31 -0.3
39 AT1G15930 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.82 0.32 -0.32
40 AT1G15810 S15/NS1, RNA-binding protein 0.82 0.32 -0.33
41 AT2G33370 Ribosomal protein L14p/L23e family protein 0.82 0.34 -0.33
42 AT2G27840 histone deacetylase-related / HD-related HISTONE DEACETYLASE 13, HDT04,
HDT4		 0.82 0.31 -0.31
43 AT1G18710 myb domain protein 47 myb domain protein 47, myb domain
protein 47		 -0.82 0.31 -0.31
44 AT4G17520 Hyaluronan / mRNA binding family 0.82 0.33 -0.29
45 AT1G17560 Ribosomal protein L14p/L23e family protein HUELLENLOS 0.82 0.3 -0.32
46 AT1G17550 homology to ABI2 homology to ABI2 -0.82 0.33 -0.34
47 AT5G50810 translocase inner membrane subunit 8 translocase inner membrane subunit
8		 0.82 0.31 -0.31
48 AT4G26230 Ribosomal protein L31e family protein 0.82 0.3 -0.31
49 AT3G49100 Signal recognition particle, SRP9/SRP14 subunit 0.81 0.31 -0.32
50 AT3G23920 beta-amylase 1 beta-amylase 1, BETA-AMYLASE 7,
TR-BAMY		 -0.81 0.3 -0.32
51 AT2G19670 protein arginine methyltransferase 1A ARABIDOPSIS THALIANA PROTEIN
ARGININE METHYLTRANSFERASE 1A,
protein arginine methyltransferase
1A		 0.81 0.29 -0.35
52 AT5G22440 Ribosomal protein L1p/L10e family 0.81 0.33 -0.31
53 AT3G02530 TCP-1/cpn60 chaperonin family protein 0.81 0.31 -0.32
54 AT1G04190 Tetratricopeptide repeat (TPR)-like superfamily protein tetratricopeptide repeat 3 0.81 0.32 -0.32
55 AT2G20490 nucleolar RNA-binding Nop10p family protein EMBRYO SAC DEVELOPMENT ARREST 27,
NOP10		 0.81 0.32 -0.31
56 AT3G59650 mitochondrial ribosomal protein L51/S25/CI-B8 family
protein		 0.81 0.32 -0.31
57 AT3G61620 3'-5'-exoribonuclease family protein RRP41 0.8 0.3 -0.31
58 AT5G42050 DCD (Development and Cell Death) domain protein -0.8 0.3 -0.3
59 AT2G31725 Eukaryotic protein of unknown function (DUF842) 0.8 0.33 -0.32
60 AT3G59540 Ribosomal L38e protein family 0.8 0.34 -0.32
61 AT2G22430 homeobox protein 6 homeobox protein 6, homeobox
protein 6		 -0.8 0.33 -0.31
62 AT5G16130 Ribosomal protein S7e family protein 0.8 0.33 -0.33
63 AT3G49590 Autophagy-related protein 13 autophagy-related 13 -0.8 0.32 -0.32
64 AT4G03030 Galactose oxidase/kelch repeat superfamily protein -0.8 0.32 -0.3
65 AT3G20300 Protein of unknown function (DUF3537) -0.8 0.33 -0.29
66 AT5G20890 TCP-1/cpn60 chaperonin family protein 0.8 0.33 -0.31
67 AT2G35605 SWIB/MDM2 domain superfamily protein 0.8 0.32 -0.34
68 AT1G23410 Ribosomal protein S27a / Ubiquitin family protein 0.79 0.32 -0.3
69 AT1G20950 Phosphofructokinase family protein 0.79 0.32 -0.32
70 AT3G09890 Ankyrin repeat family protein 0.79 0.31 -0.31
71 AT1G08230 Transmembrane amino acid transporter family protein ATGAT1, L-GAMMA-AMINOBUTYRIC ACID
TRANSPORTER 1		 -0.79 0.34 -0.34
72 AT5G23290 prefoldin 5 prefoldin 5 0.79 0.29 -0.32
73 AT3G46940 DUTP-PYROPHOSPHATASE-LIKE 1 DUTP-PYROPHOSPHATASE-LIKE 1 0.79 0.35 -0.34
74 AT4G30800 Nucleic acid-binding, OB-fold-like protein 0.79 0.31 -0.31
75 AT3G55010 phosphoribosylformylglycinamidine cyclo-ligase, chloroplast
/ phosphoribosyl-aminoimidazole synthetase / AIR synthase
(PUR5)		 ATPURM, EMBRYO DEFECTIVE 2818,
PUR5		 0.79 0.33 -0.32
76 AT3G10550 Myotubularin-like phosphatases II superfamily Arabidopsis thaliana myotubularin
1, myotubularin 1		 -0.79 0.32 -0.32
77 AT4G31460 Ribosomal L28 family 0.79 0.3 -0.32
78 AT1G77750 Ribosomal protein S13/S18 family 0.79 0.29 -0.31
79 AT1G62310 transcription factor jumonji (jmjC) domain-containing
protein		 -0.78 0.31 -0.32
80 AT1G64660 methionine gamma-lyase methionine gamma-lyase, methionine
gamma-lyase		 -0.78 0.31 -0.3
81 AT4G27410 NAC (No Apical Meristem) domain transcriptional regulator
superfamily protein		 Arabidopsis NAC domain containing
protein 72, RESPONSIVE TO
DESICCATION 26		 -0.78 0.3 -0.3
82 AT3G53960 Major facilitator superfamily protein -0.77 0.31 -0.33
83 AT5G18130 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G03870.2); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.77 0.32 -0.3
84 AT1G32740 SBP (S-ribonuclease binding protein) family protein -0.77 0.31 -0.3
85 AT2G33380 Caleosin-related family protein Arabidopsis thaliana caleosin 3,
caleosin 3, caleosin 3, RESPONSIVE
TO DESSICATION 20		 -0.77 0.31 -0.32
86 AT5G49660 Leucine-rich repeat transmembrane protein kinase family
protein		 XYLEM INTERMIXED WITH PHLOEM 1 -0.77 0.33 -0.33
87 AT5G54730 homolog of yeast autophagy 18 (ATG18) F ARABIDOPSIS THALIANA HOMOLOG OF
YEAST AUTOPHAGY 18 (ATG18) F,
homolog of yeast autophagy 18
(ATG18) F, homolog of yeast
autophagy 18 (ATG18) F		 -0.77 0.32 -0.36
88 AT4G16190 Papain family cysteine protease -0.77 0.32 -0.32
89 AT1G20880 RNA-binding (RRM/RBD/RNP motifs) family protein -0.76 0.33 -0.33
90 AT3G24740 Protein of unknown function (DUF1644) -0.76 0.29 -0.33
91 AT5G66730 C2H2-like zinc finger protein ENHYDROUS, INDETERMINATE DOMAIN 1 -0.76 0.31 -0.31
92 AT1G24070 cellulose synthase-like A10 cellulose synthase-like A10,
CELLULOSE SYNTHASE LIKE A10,
cellulose synthase-like A10		 -0.76 0.31 -0.32
93 AT5G28520 Mannose-binding lectin superfamily protein -0.76 0.33 -0.32
94 AT3G46450 SEC14 cytosolic factor family protein / phosphoglyceride
transfer family protein		 -0.76 0.32 -0.33
95 AT3G03870 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G18130.1); Has 41 Blast hits
to 41 proteins in 11 species: Archae - 0; Bacteria - 0;
Metazoa - 2; Fungi - 0; Plants - 39; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.76 0.31 -0.3
96 AT3G16940 calmodulin binding;transcription regulators -0.75 0.32 -0.32
97 AT1G21000 PLATZ transcription factor family protein -0.75 0.33 -0.31
98 AT5G04760 Duplicated homeodomain-like superfamily protein -0.75 0.32 -0.34
99 AT4G18140 SCP1-like small phosphatase 4b SCP1-like small phosphatase 4b -0.75 0.31 -0.31
100 AT2G46270 G-box binding factor 3 G-box binding factor 3 -0.75 0.33 -0.3
101 AT1G29400 MEI2-like protein 5 MEI2-like protein 5, MEI2-like
protein 5		 -0.74 0.32 -0.32
102 AT2G26890 DNAJ heat shock N-terminal domain-containing protein GRAVITROPISM DEFECTIVE 2,
KATAMARI2		 -0.74 0.31 -0.3
103 AT4G18700 CBL-interacting protein kinase 12 WPL4-LIKE 4, CBL-interacting
protein kinase 12, SNF1-RELATED
PROTEIN KINASE 3.9, WPL4-LIKE 4		 -0.74 0.34 -0.32
104 AT2G38790 unknown protein; Has 21 Blast hits to 21 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 19; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.74 0.31 -0.3
105 AT5G58690 phosphatidylinositol-speciwc phospholipase C5 ATPLC5,
phosphatidylinositol-speciwc
phospholipase C5		 -0.73 0.31 -0.31
106 AT1G02305 Cysteine proteinases superfamily protein -0.73 0.32 -0.32
107 AT1G58360 amino acid permease 1 amino acid permease 1, NEUTRAL
AMINO ACID TRANSPORTER 2		 -0.73 0.31 -0.31
108 AT3G47960 Major facilitator superfamily protein -0.73 0.3 -0.3
109 AT1G55110 indeterminate(ID)-domain 7 indeterminate(ID)-domain 7,
indeterminate(ID)-domain 7		 -0.72 0.31 -0.29
110 AT4G26080 Protein phosphatase 2C family protein ABA INSENSITIVE 1, AtABI1 -0.72 0.33 -0.32
111 AT2G40460 Major facilitator superfamily protein -0.72 0.3 -0.33
112 AT4G27990 YGGT family protein ATYLMG1-2, YLMG1-2 -0.72 0.32 -0.3
113 AT5G57050 Protein phosphatase 2C family protein ABA INSENSITIVE 2, AtABI2 -0.72 0.31 -0.31
114 AT2G37870 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.72 0.31 -0.32
115 AT2G40830 RING-H2 finger C1A RING-H2 finger C1A -0.72 0.32 -0.32
116 AT5G01820 serine/threonine protein kinase 1 ATCIPK14, serine/threonine protein
kinase 1, CBL-INTERACTING PROTEIN
KINASE 14, SOS2-like protein
kinase 24, SNF1-RELATED PROTEIN
KINASE 3.15, serine/threonine
protein kinase 1		 -0.72 0.31 -0.31
117 AT2G40435 BEST Arabidopsis thaliana protein match is: transcription
regulators (TAIR:AT3G56220.1); Has 289 Blast hits to 289
proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 289; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.72 0.31 -0.33
118 AT5G66400 Dehydrin family protein ARABIDOPSIS THALIANA
DROUGHT-INDUCED 8, RESPONSIVE TO
ABA 18		 -0.71 0.28 -0.33
119 AT1G68570 Major facilitator superfamily protein -0.71 0.32 -0.33
120 AT2G28400 Protein of unknown function, DUF584 -0.71 0.32 -0.35
121 AT5G57390 AINTEGUMENTA-like 5 AINTEGUMENTA-like 5, CHOTTO 1,
EMBRYOMAKER, PLETHORA 5		 -0.71 0.32 -0.33
122 AT2G35680 Phosphotyrosine protein phosphatases superfamily protein -0.71 0.32 -0.32
123 AT1G78080 related to AP2 4 related to AP2 4, wound induced
dedifferentiation 1		 -0.71 0.32 -0.29
124 AT3G07870 F-box and associated interaction domains-containing protein -0.71 0.32 -0.33
125 AT3G01560 Protein of unknown function (DUF1421) -0.71 0.31 -0.33
126 AT1G28230 purine permease 1 ATPUP1, purine permease 1 -0.7 0.3 -0.32
127 AT4G35790 phospholipase D delta ARABIDOPSIS THALIANA PHOSPHOLIPASE
D DELTA, phospholipase D delta		 -0.7 0.29 -0.3
128 AT3G08760 Protein kinase superfamily protein ATSIK -0.7 0.31 -0.32
129 AT1G52000 Mannose-binding lectin superfamily protein -0.7 0.29 -0.32
130 AT4G24450 phosphoglucan, water dikinase ATGWD2, GWD3, phosphoglucan, water
dikinase		 -0.7 0.3 -0.32
131 AT1G51550 Kelch repeat-containing F-box family protein -0.7 0.3 -0.3
132 AT2G31800 Integrin-linked protein kinase family -0.7 0.31 -0.32
133 AT1G27200 Domain of unknown function (DUF23) -0.7 0.33 -0.34