AGICode | AT3G44380 |
Description | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT3G44380 | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family |
1 | 0.31 | -0.29 | |||
2 | AT3G54560 | histone H2A 11 | histone H2A 11 | 0.84 | 0.29 | -0.3 | ||
3 | AT2G03780 | Translin family protein | 0.83 | 0.29 | -0.32 | |||
4 | AT3G43810 | calmodulin 7 | calmodulin 7 | 0.8 | 0.32 | -0.3 | ||
5 | AT1G20490 | AMP-dependent synthetase and ligase family protein | -0.79 | 0.32 | -0.31 | |||
6 | AT1G48610 | AT hook motif-containing protein | 0.79 | 0.32 | -0.31 | |||
7 | AT3G62840 | Small nuclear ribonucleoprotein family protein | 0.79 | 0.31 | -0.3 | |||
8 | AT1G13340 | Regulator of Vps4 activity in the MVB pathway protein | -0.78 | 0.31 | -0.33 | |||
9 | AT4G18060 | SH3 domain-containing protein | 0.78 | 0.34 | -0.32 | |||
10 | AT1G10430 | protein phosphatase 2A-2 | protein phosphatase 2A-2 | 0.78 | 0.34 | -0.3 | ||
11 | AT4G29830 | Transducin/WD40 repeat-like superfamily protein | vernalization independence 3 | 0.77 | 0.31 | -0.32 | ||
12 | AT2G42310 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57785.1); Has 115 Blast hits to 115 proteins in 48 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 44; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.77 | 0.33 | -0.32 | |||
13 | AT3G13674 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G55205.1); Has 76 Blast hits to 76 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.77 | 0.32 | -0.32 | |||
14 | AT3G14080 | Small nuclear ribonucleoprotein family protein | 0.77 | 0.3 | -0.32 | |||
15 | AT5G50170 | C2 calcium/lipid-binding and GRAM domain containing protein | -0.77 | 0.3 | -0.33 | |||
16 | AT2G38800 | Plant calmodulin-binding protein-related | -0.77 | 0.31 | -0.33 | |||
17 | AT5G25080 | Sas10/Utp3/C1D family | 0.77 | 0.32 | -0.33 | |||
18 | AT5G27720 | Small nuclear ribonucleoprotein family protein | embryo defective 1644, SM-like protein 4 |
0.76 | 0.31 | -0.31 | ||
19 | AT3G06660 | PAPA-1-like family protein / zinc finger (HIT type) family protein |
0.76 | 0.31 | -0.32 | |||
20 | AT4G22830 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2499 (InterPro:IPR019634); Has 319 Blast hits to 317 proteins in 103 species: Archae - 0; Bacteria - 147; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink). |
0.76 | 0.31 | -0.31 | |||
21 | AT2G30410 | tubulin folding cofactor A (KIESEL) | KIESEL, TUBULIN FOLDING FACTOR A | 0.76 | 0.33 | -0.31 | ||
22 | AT2G36960 | TSL-kinase interacting protein 1 | TSL-kinase interacting protein 1 | -0.76 | 0.28 | -0.31 | ||
23 | AT5G22880 | histone B2 | HISTONE H2B, histone B2 | 0.76 | 0.32 | -0.31 | ||
24 | AT3G15480 | Protein of unknown function (DUF1218) | 0.76 | 0.31 | -0.31 | |||
25 | AT3G10320 | Glycosyltransferase family 61 protein | -0.76 | 0.32 | -0.33 | |||
26 | AT5G65360 | Histone superfamily protein | 0.76 | 0.3 | -0.3 | |||
27 | AT5G66055 | ankyrin repeat protein | ankyrin repeat protein, EMBRYO DEFECTIVE 16, EMBRYO DEFECTIVE 2036 |
0.75 | 0.32 | -0.32 | ||
28 | AT3G22460 | O-acetylserine (thiol) lyase (OAS-TL) isoform A2 | O-acetylserine (thiol) lyase (OAS-TL) isoform A2 |
-0.75 | 0.32 | -0.31 | ||
29 | AT3G52590 | ubiquitin extension protein 1 | EMBRYO DEFECTIVE 2167, EARLY-RESPONSIVE TO DEHYDRATION 16, HAPLESS 4, ubiquitin extension protein 1 |
0.75 | 0.31 | -0.3 | ||
30 | AT4G28980 | CDK-activating kinase 1AT | CDK-activating kinase 1AT, CYCLIN-DEPENDENT KINASE F;1 |
0.75 | 0.32 | -0.32 | ||
31 | AT3G14270 | phosphatidylinositol-4-phosphate 5-kinase family protein | FORMS APLOID AND BINUCLEATE CELLS 1B |
-0.75 | 0.32 | -0.33 | ||
32 | AT3G43720 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
0.75 | 0.32 | -0.33 | |||
33 | AT2G39900 | GATA type zinc finger transcription factor family protein | WLIM2a | 0.75 | 0.31 | -0.29 | ||
34 | AT1G65650 | Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 | UCH2 | 0.74 | 0.3 | -0.32 | ||
35 | AT1G10230 | SKP1-like 18 | SKP1-like 18, SKP1-like 18 | 0.74 | 0.3 | -0.35 | ||
36 | AT4G26840 | small ubiquitin-like modifier 1 | ARABIDOPSIS THALIANA SMALL UBIQUITIN-LIKE MODIFIER 1, SMALL UBIQUITIN-LIKE MODIFIER 1, SMALL UBIQUITIN-LIKE MODIFIER 1, small ubiquitin-like modifier 1 |
0.74 | 0.31 | -0.31 | ||
37 | AT4G15330 | cytochrome P450, family 705, subfamily A, polypeptide 1 | cytochrome P450, family 705, subfamily A, polypeptide 1 |
-0.74 | 0.33 | -0.31 | ||
38 | AT5G13080 | WRKY DNA-binding protein 75 | ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 75, WRKY DNA-binding protein 75 |
-0.74 | 0.33 | -0.32 | ||
39 | AT5G17070 | CONTAINS InterPro DOMAIN/s: Protein phosphatase 4 core regulatory subunit R2 (InterPro:IPR015267); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.74 | 0.3 | -0.33 | |||
40 | AT2G41350 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G21980.1); Has 188 Blast hits to 188 proteins in 66 species: Archae - 0; Bacteria - 12; Metazoa - 90; Fungi - 15; Plants - 54; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). |
AtAUG1, augmin 1, EMBRYO DEFECTIVE 2819 |
0.73 | 0.34 | -0.32 | ||
41 | AT4G25680 | PPPDE putative thiol peptidase family protein | 0.73 | 0.32 | -0.31 | |||
42 | AT3G25040 | endoplasmic reticulum retention defective 2B | endoplasmic reticulum retention defective 2B |
0.73 | 0.33 | -0.31 | ||
43 | AT5G37890 | Protein with RING/U-box and TRAF-like domains | 0.73 | 0.33 | -0.34 | |||
44 | AT5G16240 | Plant stearoyl-acyl-carrier-protein desaturase family protein |
0.73 | 0.3 | -0.3 | |||
45 | AT3G54930 | Protein phosphatase 2A regulatory B subunit family protein | 0.73 | 0.32 | -0.31 | |||
46 | AT5G41950 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.73 | 0.31 | -0.3 | |||
47 | AT5G02540 | NAD(P)-binding Rossmann-fold superfamily protein | 0.73 | 0.3 | -0.31 | |||
48 | AT5G23550 | Got1/Sft2-like vescicle transport protein family | 0.73 | 0.29 | -0.3 | |||
49 | AT1G78040 | Pollen Ole e 1 allergen and extensin family protein | 0.73 | 0.31 | -0.33 | |||
50 | AT2G34500 | cytochrome P450, family 710, subfamily A, polypeptide 1 | cytochrome P450, family 710, subfamily A, polypeptide 1 |
-0.73 | 0.32 | -0.31 | ||
51 | AT1G70300 | K+ uptake permease 6 | K+ uptake permease 6 | -0.72 | 0.3 | -0.3 | ||
52 | AT1G71750 | Hypoxanthine-guanine phosphoribosyltransferase | Hypoxanthine-guanine phosphoribosyltransferase |
0.72 | 0.32 | -0.33 | ||
53 | AT3G51440 | Calcium-dependent phosphotriesterase superfamily protein | -0.71 | 0.31 | -0.33 | |||
54 | AT3G21230 | 4-coumarate:CoA ligase 5 | 4-coumarate:CoA ligase 5 | -0.71 | 0.33 | -0.3 | ||
55 | AT5G46340 | O-acetyltransferase family protein | REDUCED WALL ACETYLATION 1 | -0.71 | 0.28 | -0.31 | ||
56 | AT5G24600 | Protein of unknown function, DUF599 | -0.71 | 0.3 | -0.32 | |||
57 | AT2G23110 | Late embryogenesis abundant protein, group 6 | -0.71 | 0.31 | -0.31 | |||
58 | AT1G10050 | glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein |
-0.71 | 0.31 | -0.3 | |||
59 | AT1G24460 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G31570.1); Has 181008 Blast hits to 85359 proteins in 3551 species: Archae - 3290; Bacteria - 48304; Metazoa - 70793; Fungi - 13943; Plants - 10118; Viruses - 785; Other Eukaryotes - 33775 (source: NCBI BLink). |
TGN-localized SYP41 interacting protein |
-0.71 | 0.31 | -0.32 | ||
60 | AT5G50780 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein |
-0.7 | 0.31 | -0.31 | |||
61 | AT5G40340 | Tudor/PWWP/MBT superfamily protein | -0.7 | 0.32 | -0.3 | |||
62 | AT2G22910 | N-acetyl-l-glutamate synthase 1 | N-acetyl-l-glutamate synthase 1 | -0.7 | 0.3 | -0.31 | ||
63 | AT1G80820 | cinnamoyl coa reductase | ATCCR2, cinnamoyl coa reductase | -0.69 | 0.3 | -0.32 | ||
64 | AT1G68765 | Putative membrane lipoprotein | INFLORESCENCE DEFICIENT IN ABSCISSION |
-0.69 | 0.3 | -0.32 | ||
65 | AT5G42580 | cytochrome P450, family 705, subfamily A, polypeptide 12 | cytochrome P450, family 705, subfamily A, polypeptide 12 |
-0.68 | 0.31 | -0.33 | ||
66 | AT1G20120 | GDSL-like Lipase/Acylhydrolase superfamily protein | -0.68 | 0.35 | -0.3 | |||
67 | AT4G26180 | Mitochondrial substrate carrier family protein | -0.68 | 0.32 | -0.32 | |||
68 | AT1G61810 | beta-glucosidase 45 | beta-glucosidase 45 | -0.67 | 0.3 | -0.32 | ||
69 | AT2G35300 | Late embryogenesis abundant protein, group 1 protein | late embryogenesis abundant 4-2, late embryogenesis abundant 18, late embryogenesis abundant 4-2 |
-0.67 | 0.31 | -0.32 | ||
70 | AT1G36510 | Nucleic acid-binding proteins superfamily | -0.67 | 0.29 | -0.31 | |||
71 | AT2G25730 | unknown protein; Has 157 Blast hits to 144 proteins in 62 species: Archae - 0; Bacteria - 0; Metazoa - 101; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). |
-0.66 | 0.31 | -0.31 | |||
72 | AT2G22760 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
-0.66 | 0.29 | -0.3 | |||
73 | AT1G61820 | beta glucosidase 46 | beta glucosidase 46 | -0.65 | 0.31 | -0.32 | ||
74 | AT2G39030 | Acyl-CoA N-acyltransferases (NAT) superfamily protein | N-acetyltransferase activity 1 | -0.65 | 0.31 | -0.34 | ||
75 | AT1G14070 | fucosyltransferase 7 | fucosyltransferase 7 | -0.65 | 0.31 | -0.34 | ||
76 | AT5G42600 | marneral synthase | marneral synthase | -0.65 | 0.31 | -0.32 | ||
77 | AT3G63150 | MIRO-related GTP-ase 2 | CALCIUM BINDING GTP-ASE, MIRO-related GTP-ase 2 |
-0.65 | 0.34 | -0.3 | ||
78 | AT1G59950 | NAD(P)-linked oxidoreductase superfamily protein | -0.64 | 0.29 | -0.3 | |||
79 | AT4G12350 | myb domain protein 42 | myb domain protein 42, myb domain protein 42 |
-0.63 | 0.32 | -0.31 | ||
80 | AT5G52050 | MATE efflux family protein | -0.63 | 0.32 | -0.31 | |||
81 | AT5G15020 | SIN3-like 2 | SIN3-like 2 | -0.63 | 0.35 | -0.31 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
82 | C0029 | 3-Indolylacetonitrile | - | Indole-3-acetonitrile | indole glucosinolate breakdown (insect chewing induced), IAA biosynthesis I, camalexin biosynthesis |
-0.74 | 0.32 | -0.32 |