AT3G44030 : -
Query Information
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AGICode AT3G44030
Description pseudogene, similar to OSJNBb0043H09.1, blastp match of 40% identity and 8.4e-38 P-value to GP|21740634|emb|CAD40195.1||AL606611 OSJNBb0043H09.1 {Oryza sativa (japonica cultivar-group)}
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G44030 pseudogene, similar to OSJNBb0043H09.1, blastp match of 40%
identity and 8.4e-38 P-value to
GP|21740634|emb|CAD40195.1||AL606611 OSJNBb0043H09.1 {Oryza
sativa (japonica cultivar-group)}		 1 0.32 -0.32
2 AT4G28540 casein kinase I-like 6 casein kinase I-like 6, PAPK1 -0.65 0.31 -0.32
3 AT1G15830 unknown protein; Has 165982 Blast hits to 57214 proteins in
2459 species: Archae - 263; Bacteria - 44622; Metazoa -
55751; Fungi - 10656; Plants - 17613; Viruses - 2527; Other
Eukaryotes - 34550 (source: NCBI BLink).		 0.64 0.33 -0.33
4 AT3G20580 COBRA-like protein 10 precursor COBRA-like protein 10 precursor -0.64 0.31 -0.28
5 AT3G05280 Integral membrane Yip1 family protein -0.64 0.31 -0.3
6 AT1G23520 Domain of unknown function (DUF220) 0.63 0.3 -0.32
7 AT1G47920 RNI-like superfamily protein -0.63 0.31 -0.3
8 AT5G39390 Leucine-rich repeat protein kinase family protein -0.62 0.3 -0.34
9 AT3G42060 myosin heavy chain-related 0.62 0.32 -0.31
10 AT3G47670 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 -0.62 0.29 -0.33
11 AT5G56490 D-arabinono-1,4-lactone oxidase family protein -0.61 0.31 -0.31
12 AT1G72360 Integrase-type DNA-binding superfamily protein AtERF73, ethylene response factor
73, HYPOXIA RESPONSIVE ERF
(ETHYLENE RESPONSE FACTOR) 1		 -0.61 0.31 -0.32
13 AT5G60920 COBRA-like extracellular glycosyl-phosphatidyl
inositol-anchored protein family		 COBRA -0.61 0.33 -0.32
14 AT5G08210 MIR834a; miRNA microRNA834A 0.61 0.32 -0.33
15 AT1G66210 Subtilisin-like serine endopeptidase family protein -0.61 0.32 -0.33
16 AT1G17870 ethylene-dependent gravitropism-deficient and
yellow-green-like 3		 ETHYLENE-DEPENDENT
GRAVITROPISM-DEFICIENT AND
YELLOW-GREEN-LIKE 3,
ETHYLENE-DEPENDENT
GRAVITROPISM-DEFICIENT AND
YELLOW-GREEN-LIKE 3		 0.6 0.32 -0.3
17 AT2G17390 ankyrin repeat-containing 2B ankyrin repeat-containing 2B -0.6 0.34 -0.32
18 AT5G11640 Thioredoxin superfamily protein -0.6 0.32 -0.32
19 AT1G01230 ORMDL family protein -0.59 0.33 -0.3
20 AT1G22200 Endoplasmic reticulum vesicle transporter protein -0.59 0.31 -0.32
21 AT3G60730 Plant invertase/pectin methylesterase inhibitor superfamily 0.59 0.32 -0.32
22 AT5G29090 transposable element gene 0.59 0.32 -0.32
23 AT4G02430 RNA-binding (RRM/RBD/RNP motifs) family protein Serine/Arginine-Rich Protein
Splicing Factor 34b,
Serine/Arginine-Rich Protein
Splicing Factor 34b		 0.59 0.3 -0.32
24 AT5G49720 glycosyl hydrolase 9A1 glycosyl hydrolase 9A1, DEFECTIVE
CYTOKINESIS, glycosyl hydrolase
9A1, IRREGULAR XYLEM 2, KORRIGAN,
KORRIGAN 1, RADIALLY SWOLLEN 2,
TUMOROUS SHOOT DEVELOPMENT 1		 -0.59 0.3 -0.34
25 AT3G49300 proline-rich family protein 0.59 0.3 -0.32
26 AT5G47780 galacturonosyltransferase 4 galacturonosyltransferase 4 -0.58 0.3 -0.29
27 AT2G19550 alpha/beta-Hydrolases superfamily protein 0.58 0.33 -0.32
28 AT5G50880 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.58 0.3 -0.31
29 AT5G20650 copper transporter 5 copper transporter 5 -0.58 0.32 -0.33
30 AT4G16143 importin alpha isoform 2 importin alpha isoform 2 -0.58 0.31 -0.31
31 AT5G05920 deoxyhypusine synthase deoxyhypusine synthase, embryo sac
development arrest 22		 -0.58 0.31 -0.31
32 AT2G14835 RING/U-box superfamily protein -0.57 0.31 -0.29
33 AT3G17230 invertase/pectin methylesterase inhibitor family protein 0.57 0.3 -0.32
34 AT4G03760 transposable element gene -0.57 0.31 -0.32
35 AT5G49110 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; EXPRESSED IN:
cultured cell; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.57 0.33 -0.31
36 AT2G06310 transposable element gene 0.57 0.31 -0.31
37 AT2G46860 pyrophosphorylase 3 pyrophosphorylase 3,
pyrophosphorylase 3		 -0.57 0.32 -0.27
38 AT1G47280 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 9 plant structures;
EXPRESSED DURING: L mature pollen stage, M germinated
pollen stage, 4 anthesis, C globular stage, petal
differentiation and expansion stage; Has 6 Blast hits to 6
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.57 0.31 -0.3
39 AT1G23830 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 12 plant structures;
EXPRESSED DURING: 9 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G23840.1); Has 57 Blast hits to 52 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.56 0.3 -0.31
40 AT1G69860 Major facilitator superfamily protein 0.56 0.3 -0.32
41 AT1G68680 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 16 growth stages; Has 20 Blast hits to 20 proteins
in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.56 0.31 -0.32
42 AT4G02900 ERD (early-responsive to dehydration stress) family protein 0.56 0.32 -0.3
43 AT2G04560 transferases, transferring glycosyl groups AtLpxB, lipid X B 0.56 0.3 -0.29
44 AT4G35335 Nucleotide-sugar transporter family protein -0.55 0.33 -0.3
45 AT4G27420 ABC-2 type transporter family protein ATP-binding cassette G9 0.55 0.31 -0.29
46 AT1G02620 Ras-related small GTP-binding family protein 0.55 0.31 -0.29
47 AT5G58810 subtilisin-like serine protease, pseudogene, contains
similarity to prepro-cucumisin GI:807698 from (Cucumis
melo); non-consensus acceptor site AA at exon 6; blastp
match of 43% identity and 2.1e-113 P-value to
GP|13325079|gb|AAD02075.3||AF036960 subtilisin-like
protease C1 {Glycine max}		 0.55 0.31 -0.32
48 AT5G65070 K-box region and MADS-box transcription factor family
protein 		AGAMOUS-like 69, FCL4, MADS
AFFECTING FLOWERING 4		 -0.55 0.32 -0.31
49 AT4G30420 nodulin MtN21 /EamA-like transporter family protein -0.55 0.34 -0.35
50 AT4G28850 xyloglucan endotransglucosylase/hydrolase 26 ATXTH26, xyloglucan
endotransglucosylase/hydrolase 26		 -0.54 0.3 -0.29
51 AT4G30030 Eukaryotic aspartyl protease family protein 0.54 0.31 -0.3
52 AT2G24780 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.54 0.31 -0.32
53 AT1G74055 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED
DURING: 6 growth stages; Has 24 Blast hits to 24 proteins
in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.54 0.32 -0.34
54 AT5G63910 farnesylcysteine lyase farnesylcysteine lyase -0.54 0.33 -0.3
55 AT5G50130 NAD(P)-binding Rossmann-fold superfamily protein 0.54 0.31 -0.33
56 AT1G09270 importin alpha isoform 4 importin alpha isoform 4 -0.54 0.3 -0.31
57 AT1G68100 ZIP metal ion transporter family IAA-ALANINE RESISTANT 1 -0.54 0.31 -0.3
58 AT3G16760 Tetratricopeptide repeat (TPR)-like superfamily protein -0.54 0.32 -0.31
59 AT3G54060 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G37960.2); Has 455 Blast hits
to 322 proteins in 98 species: Archae - 0; Bacteria - 178;
Metazoa - 88; Fungi - 75; Plants - 28; Viruses - 2; Other
Eukaryotes - 84 (source: NCBI BLink).		 0.54 0.3 -0.31
60 AT4G23580 Galactose oxidase/kelch repeat superfamily protein -0.54 0.31 -0.3
61 AT5G14080 Tetratricopeptide repeat (TPR)-like superfamily protein 0.54 0.31 -0.3
62 AT5G60290 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.54 0.29 -0.32
63 AT5G36260 Eukaryotic aspartyl protease family protein -0.54 0.34 -0.33
64 AT3G48010 cyclic nucleotide-gated channel 16 CYCLIC NUCLEOTIDE-GATED CHANNEL
16, cyclic nucleotide-gated
channel 16		 0.54 0.31 -0.3
65 AT2G16910 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 ABORTED MICROSPORES 0.53 0.33 -0.3
66 AT3G07490 ARF-GAP domain 11 ARF-GAP domain 11, AtCML3,
calmodulin-like 3		 -0.53 0.33 -0.31
67 AT5G35430 Tetratricopeptide repeat (TPR)-like superfamily protein -0.53 0.3 -0.31
68 AT5G63900 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc
finger domain		 0.53 0.3 -0.29
69 AT1G75250 RAD-like 6 RAD-like 6, RAD-like 6,
RADIALIS-LIKE SANT/MYB 3		 -0.53 0.31 -0.31
70 AT1G51520 RNA-binding (RRM/RBD/RNP motifs) family protein 0.53 0.29 -0.33
71 AT5G58510 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 14 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G55060.2); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.52 0.33 -0.34
72 AT4G24630 DHHC-type zinc finger family protein 0.52 0.31 -0.33
73 AT2G21460 transposable element gene -0.52 0.31 -0.31
74 AT4G31450 RING/U-box superfamily protein 0.52 0.31 -0.29
75 AT1G61860 Protein kinase superfamily protein -0.52 0.32 -0.32
76 AT5G08335 Isoprenylcysteine carboxyl methyltransferase (ICMT) family ARABIDOPSIS THALIANA ISOPRENYL
CYSTEINE METHYLTRANSFERASE B,
ATSTE14B, ISOPRENYL CYSTEINE
METHYLTRANSFERASE B		 -0.52 0.29 -0.31
77 AT5G03690 Aldolase superfamily protein -0.52 0.33 -0.32
78 AT2G15640 F-box family protein 0.51 0.31 -0.31
79 AT5G36080 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G32904.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.51 0.33 -0.33
80 AT4G13985 FBD-associated F-box protein FBD-associated F-box protein 0.51 0.31 -0.34
81 AT2G10050 transposable element gene 0.51 0.3 -0.29
82 AT2G47280 Pectin lyase-like superfamily protein 0.51 0.3 -0.32
83 AT3G05830 Encodes alpha-helical IF (intermediate filament)-like
protein.		 0.5 0.31 -0.29
84 AT1G34240 transposable element gene 0.5 0.31 -0.3
85 AT2G20625 Protein of unknown function (DUF626) 0.5 0.31 -0.32
86 AT1G07550 Leucine-rich repeat protein kinase family protein 0.49 0.34 -0.33
87 AT1G26410 FAD-binding Berberine family protein 0.49 0.33 -0.33