AT3G43060 : -
Query Information
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AGICode AT3G43060
Description transposable element gene
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G43060 transposable element gene 1 0.3 -0.3
2 AT5G19430 RING/U-box superfamily protein 0.69 0.32 -0.32
3 AT3G49890 unknown protein; Has 27 Blast hits to 27 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0;
Plants - 21; Viruses - 0; Other Eukaryotes - 3 (source:
NCBI BLink).		 -0.65 0.32 -0.31
4 AT1G26370 RNA helicase family protein -0.64 0.29 -0.32
5 AT3G60760 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.64 0.3 -0.32
6 AT2G14810 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.63 0.3 -0.31
7 AT1G74820 RmlC-like cupins superfamily protein -0.62 0.33 -0.31
8 AT3G44530 homolog of histone chaperone HIRA homolog of histone chaperone HIRA -0.62 0.33 -0.31
9 AT2G40600 appr-1-p processing enzyme family protein 0.62 0.32 -0.32
10 AT1G33250 Protein of unknown function (DUF604) -0.62 0.31 -0.29
11 AT4G38440 LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 12 growth stages; CONTAINS InterPro
DOMAIN/s: RNA polymerase II-associated protein 1,
C-terminal (InterPro:IPR013929), RNA polymerase
II-associated protein 1, N-terminal (InterPro:IPR013930);
Has 276 Blast hits to 220 proteins in 102 species: Archae -
0; Bacteria - 2; Metazoa - 151; Fungi - 65; Plants - 41;
Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).		 MINIYO -0.61 0.29 -0.31
12 AT1G67220 histone acetyltransferase of the CBP family 2 ARABIDOPSIS THALIANA P300/CBP
ACETYLTRANSFERASE-RELATED PROTEIN
1, HAC02, histone
acetyltransferase of the CBP
family 2		 -0.61 0.31 -0.32
13 AT4G34320 Protein of unknown function (DUF677) -0.61 0.31 -0.33
14 AT1G61760 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 0.61 0.3 -0.34
15 AT2G27240 Aluminium activated malate transporter family protein 0.6 0.31 -0.31
16 AT2G32690 glycine-rich protein 23 GLYCINE-RICH PROTEIN 23,
glycine-rich protein 23		 0.6 0.33 -0.31
17 AT5G66130 RADIATION SENSITIVE 17 RADIATION SENSITIVE 17, RADIATION
SENSITIVE 17		 -0.6 0.32 -0.32
18 AT4G22770 AT hook motif DNA-binding family protein -0.6 0.33 -0.31
19 AT1G67890 PAS domain-containing protein tyrosine kinase family
protein		 0.6 0.32 -0.28
20 AT1G73290 serine carboxypeptidase-like 5 serine carboxypeptidase-like 5 0.6 0.32 -0.32
21 AT3G49820 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G65925.1); Has 23 Blast hits
to 23 proteins in 7 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.6 0.31 -0.32
22 AT5G10280 myb domain protein 92 ATMYB64, myb domain protein 92,
myb domain protein 92		 -0.6 0.32 -0.32
23 AT5G57200 ENTH/ANTH/VHS superfamily protein -0.59 0.28 -0.3
24 AT3G24460 Serinc-domain containing serine and sphingolipid
biosynthesis protein		 -0.59 0.3 -0.31
25 AT4G32560 paramyosin-related 0.59 0.35 -0.31
26 AT3G42820 transposable element gene -0.59 0.33 -0.31
27 AT1G77990 STAS domain / Sulfate transporter family AST56, SULPHATE TRANSPORTER 2;2 0.59 0.31 -0.32
28 AT3G50990 Peroxidase superfamily protein -0.59 0.32 -0.32
29 AT1G47680 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G47700.1); Has 3 Blast
hits to 3 proteins in 1 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 3; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.58 0.28 -0.3
30 AT5G60040 nuclear RNA polymerase C1 nuclear RNA polymerase C1 -0.58 0.32 -0.32
31 AT5G63830 HIT-type Zinc finger family protein -0.58 0.32 -0.33
32 AT5G27810 MADS-box transcription factor family protein 0.58 0.31 -0.31
33 AT1G69120 K-box region and MADS-box transcription factor family
protein 		AGAMOUS-like 7, APETALA1 -0.58 0.32 -0.32
34 ATMG00680 hypothetical protein ORF122C 0.58 0.33 -0.31
35 AT4G24880 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.57 0.3 -0.32
36 AT3G12660 FASCICLIN-like arabinogalactan protein 14 precursor FASCICLIN-like arabinogalactan
protein 14 precursor		 -0.57 0.3 -0.33
37 AT5G18910 Protein kinase superfamily protein -0.57 0.31 -0.29
38 AT2G04025 Encodes a root meristem growth factor (RGF). Belongs to a
family of functionally redundant homologous peptides that
are secreted, tyrosine-sulfated, and expressed mainly in
the stem cell area and the innermost layer of central
columella cells. RGFs are required for maintenance of the
root stem cell niche and transit amplifying cell
proliferation. Members of this family include: At5g60810
(RGF1), At1g13620 (RGF2), At2g04025 (RGF3), At3g30350
(RGF4), At5g51451 (RGF5), At4g16515 (RGF6), At3g02240
(RGF7), At2g03830 (RGF8) and At5g64770 (RGF9).		 root meristem growth factor 3 -0.57 0.31 -0.29
39 AT4G16350 calcineurin B-like protein 6 calcineurin B-like protein 6,
SOS3-LIKE CALCIUM BINDING PROTEIN
2		 -0.57 0.34 -0.33
40 AT1G62440 leucine-rich repeat/extensin 2 leucine-rich repeat/extensin 2 -0.57 0.31 -0.31
41 AT1G01750 actin depolymerizing factor 11 actin depolymerizing factor 11 -0.57 0.31 -0.31
42 AT2G05810 ARM repeat superfamily protein -0.56 0.31 -0.31
43 AT1G22960 Pentatricopeptide repeat (PPR) superfamily protein -0.56 0.32 -0.3
44 AT4G39720 VQ motif-containing protein -0.55 0.32 -0.32
45 AT3G60330 H(+)-ATPase 7 H(+)-ATPase 7, H(+)-ATPase 7 -0.55 0.32 -0.31
46 AT5G37970 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.55 0.32 -0.3
47 AT3G60270 Cupredoxin superfamily protein -0.55 0.34 -0.28
48 AT1G42570 pseudogene, similar to P0529E05.9, blastp match of 56%
identity and 1.2e-110 P-value to
GP|18461196|dbj|BAB84393.1||AP003279 P0529E05.9 {Oryza
sativa (japonica cultivar-group)}		 -0.55 0.3 -0.31
49 AT1G68320 myb domain protein 62 myb domain protein 62, BW62B,
BW62C, myb domain protein 62		 -0.55 0.31 -0.33
50 AT5G08100 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
superfamily protein		 asparaginase A1 0.55 0.32 -0.33
51 AT2G16260 pseudogene of glycine-rich RNA-binding protein glycine-rich RNA-binding protein 1 -0.54 0.33 -0.3
52 AT2G10760 transposable element gene -0.54 0.34 -0.32
53 AT5G56230 prenylated RAB acceptor 1.G2 prenylated RAB acceptor 1.G2 0.54 0.34 -0.3
54 AT5G40230 nodulin MtN21 /EamA-like transporter family protein -0.54 0.3 -0.31
55 AT3G13280 Putative endonuclease or glycosyl hydrolase -0.54 0.31 -0.31
56 AT4G25790 CAP (Cysteine-rich secretory proteins, Antigen 5, and
Pathogenesis-related 1 protein) superfamily protein		 -0.54 0.3 -0.31
57 AT2G03740 late embryogenesis abundant domain-containing protein / LEA
domain-containing protein		 -0.54 0.33 -0.32
58 AT5G66710 Protein kinase superfamily protein -0.54 0.33 -0.33
59 AT5G45230 Disease resistance protein (TIR-NBS-LRR class) family 0.53 0.31 -0.32
60 AT5G63820 Protein of unknown function (DUF626) -0.53 0.31 -0.33
61 AT1G27740 root hair defective 6-like 4 root hair defective 6-like 4 -0.53 0.29 -0.31
62 AT1G53860 Remorin family protein -0.53 0.31 -0.35
63 AT5G46940 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 -0.53 0.33 -0.33
64 AT3G43790 zinc induced facilitator-like 2 zinc induced facilitator-like 2 0.53 0.32 -0.31
65 AT4G23310 cysteine-rich RLK (RECEPTOR-like protein kinase) 23 cysteine-rich RLK (RECEPTOR-like
protein kinase) 23		 0.52 0.32 -0.31
66 AT5G51320 transposable element gene 0.52 0.32 -0.33
67 AT3G44760 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: root, flower; EXPRESSED
DURING: petal differentiation and expansion stage; BEST
Arabidopsis thaliana protein match is: Protein of unknown
function (DUF626) (TAIR:AT3G44770.1); Has 9 Blast hits to 9
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 9; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.52 0.3 -0.33
68 AT3G24750 unknown protein; Has 25 Blast hits to 25 proteins in 12
species: Archae - 0; Bacteria - 8; Metazoa - 2; Fungi - 0;
Plants - 15; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.52 0.3 -0.29
69 AT3G43690 transposable element gene 0.51 0.31 -0.3
70 AT5G64470 Plant protein of unknown function (DUF828) TRICHOME BIREFRINGENCE-LIKE 12 0.5 0.32 -0.32
71 AT3G30220 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G43150.1); Has 30 Blast hits
to 30 proteins in 3 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.5 0.33 -0.31
72 AT1G02490 unknown protein; Has 0 Blast hits to 0 proteins in 0
species (source: NCBI BLink).		 0.49 0.32 -0.31
73 AT2G41570 transposable element gene 0.49 0.3 -0.34
74 AT3G29510 transposable element gene 0.49 0.35 -0.29
75 AT2G10140 transposable element gene 0.48 0.31 -0.31
76 AT1G27720 TBP-associated factor 4B TBP-associated factor 4,
TBP-associated factor 4B		 0.48 0.28 -0.32
77 AT1G44510 transposable element gene 0.48 0.32 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
78 C0018 sn-Glycerol-3-phosphate D,L-sn-Glycerol-3-phosphate sn-Glycerol-3-phosphate CDP-diacylglycerol biosynthesis II,
phosphatidylglycerol biosynthesis II (non-plastidic),
triacylglycerol biosynthesis,
glycerol degradation IV,
glycerol-3-phosphate shuttle,
a quinone + sn-glycerol-3-phosphate -> a quinol + dihydroxyacetone phosphate,
CDP-diacylglycerol biosynthesis I,
cardiolipin biosynthesis II,
phosphatidylglycerol biosynthesis I (plastidic),
sn-glycerol-3-phosphate + a ubiquinone -> a ubiquinol + dihydroxyacetone phosphate,
an electron-transfer-related quinone + sn-glycerol-3-phosphate -> an electron-transfer-related quinol + dihydroxyacetone phosphate 		0.71 0.45 -0.48 C0018
79 C0145 Maltotetraose - Maltotetraose starch degradation II -0.69 0.45 -0.5 C0145