AT3G43100 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT3G43100
Description transposable element gene
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G43100 transposable element gene 1 0.32 -0.3
2 AT4G14050 Pentatricopeptide repeat (PPR) superfamily protein -0.73 0.31 -0.32
3 AT3G12840 unknown protein; Has 0 Blast hits to 0 proteins in 0
species (source: NCBI BLink).		 0.72 0.33 -0.31
4 AT1G06490 glucan synthase-like 7 Arabidopsis thaliana glucan
synthase-like 7, atgsl7, callose
synthase 7, gsl07, glucan
synthase-like 7, glucan
synthase-like 7		 0.7 0.29 -0.29
5 AT1G33870 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.7 0.32 -0.33
6 AT4G10810 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G24026.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.69 0.3 -0.29
7 AT5G37055 HIT-type Zinc finger family protein ATSWC6, SERRATED LEAVES AND EARLY
FLOWERING		 -0.69 0.33 -0.33
8 AT3G42600 transposable element gene 0.68 0.31 -0.31
9 AT1G58300 heme oxygenase 4 heme oxygenase 4 0.68 0.33 -0.32
10 AT1G69430 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G26650.1); Has 216 Blast hits
to 215 proteins in 17 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 216; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.68 0.32 -0.3
11 AT5G37610 Eukaryotic porin family protein 0.68 0.33 -0.31
12 AT5G45090 phloem protein 2-A7 phloem protein 2-A7, phloem
protein 2-A7		 0.67 0.29 -0.31
13 AT1G23320 tryptophan aminotransferase related 1 tryptophan aminotransferase
related 1		 -0.67 0.31 -0.33
14 AT1G69170 Squamosa promoter-binding protein-like (SBP domain)
transcription factor family protein		 0.66 0.33 -0.33
15 AT1G31030 transposable element gene 0.65 0.31 -0.32
16 AT5G27050 AGAMOUS-like 101 AGAMOUS-like 101 0.65 0.32 -0.33
17 AT4G35050 Transducin family protein / WD-40 repeat family protein MULTICOPY SUPPRESSOR OF IRA1 3,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP C 3		 -0.65 0.29 -0.32
18 AT3G51910 heat shock transcription factor A7A ARABIDOPSIS THALIANA HEAT SHOCK
TRANSCRIPTION FACTOR A7A, heat
shock transcription factor A7A		 -0.65 0.29 -0.35
19 AT3G32100 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; Has 1 Blast hits to 1 proteins in 1 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.65 0.31 -0.34
20 AT1G28640 GDSL-like Lipase/Acylhydrolase superfamily protein 0.65 0.32 -0.35
21 AT3G26160 cytochrome P450, family 71, subfamily B, polypeptide 17 cytochrome P450, family 71,
subfamily B, polypeptide 17		 0.65 0.32 -0.32
22 AT5G27820 Ribosomal L18p/L5e family protein -0.64 0.32 -0.33
23 AT5G11360 Interleukin-1 receptor-associated kinase 4 protein 0.64 0.32 -0.32
24 AT1G73720 transducin family protein / WD-40 repeat family protein SUPPRESSORS OF MEC-8 AND UNC-52 1 -0.64 0.32 -0.31
25 AT2G36300 Integral membrane Yip1 family protein -0.64 0.31 -0.34
26 AT5G28070 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.64 0.31 -0.31
27 AT1G07210 Ribosomal protein S18 -0.64 0.32 -0.32
28 AT3G18670 Ankyrin repeat family protein -0.63 0.32 -0.33
29 AT4G30480 Tetratricopeptide repeat (TPR)-like superfamily protein AtTPR1, tetratricopeptide repeat 1 -0.63 0.31 -0.31
30 AT4G11260 phosphatase-related ATSGT1B, ENHANCED DOWNY MILDEW 1,
ENHANCER OF TIR1-1 AUXIN
RESISTANCE 3, RPR1, SGT1B		 -0.63 0.32 -0.31
31 AT4G39560 Galactose oxidase/kelch repeat superfamily protein 0.63 0.3 -0.34
32 AT3G47700 RINT-1 / TIP-1 family maigo2 -0.63 0.31 -0.31
33 AT5G18110 novel cap-binding protein novel cap-binding protein -0.63 0.31 -0.33
34 AT4G08650 transposable element gene 0.63 0.32 -0.29
35 AT2G32415 Polynucleotidyl transferase, ribonuclease H fold protein
with HRDC domain		 0.63 0.33 -0.3
36 ATCG00080 photosystem II reaction center protein I photosystem II reaction center
protein I		 0.63 0.3 -0.31
37 AT4G39220 Rer1 family protein ATRER1A -0.63 0.32 -0.32
38 AT2G48060 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: shoot, sperm cell;
CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF3595 (InterPro:IPR021999); Has 533 Blast hits to 341
proteins in 95 species: Archae - 2; Bacteria - 15; Metazoa
- 318; Fungi - 0; Plants - 93; Viruses - 0; Other
Eukaryotes - 105 (source: NCBI BLink).		 0.63 0.31 -0.31
39 AT3G54170 FKBP12 interacting protein 37 FKBP12 interacting protein 37,
FKBP12 interacting protein 37		 -0.62 0.3 -0.32
40 AT1G09190 Tetratricopeptide repeat (TPR)-like superfamily protein -0.62 0.3 -0.32
41 AT2G22270 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G39860.2); Has 247 Blast hits
to 231 proteins in 42 species: Archae - 0; Bacteria - 17;
Metazoa - 14; Fungi - 5; Plants - 145; Viruses - 0; Other
Eukaryotes - 66 (source: NCBI BLink).		 -0.62 0.32 -0.28
42 AT1G13200 F-box and associated interaction domains-containing protein 0.62 0.32 -0.33
43 AT3G14290 20S proteasome alpha subunit E2 20S proteasome alpha subunit E2 -0.62 0.35 -0.31
44 AT1G71690 Protein of unknown function (DUF579) 0.62 0.3 -0.32
45 AT1G19240 unknown protein; Has 24 Blast hits to 24 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.62 0.32 -0.32
46 AT1G48090 calcium-dependent lipid-binding family protein 0.62 0.3 -0.31
47 AT1G58100 TCP family transcription factor TCP domain protein 8 -0.62 0.32 -0.31
48 AT3G57360 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G02370.2); Has 122 Blast hits
to 122 proteins in 54 species: Archae - 0; Bacteria - 0;
Metazoa - 74; Fungi - 4; Plants - 41; Viruses - 0; Other
Eukaryotes - 3 (source: NCBI BLink).		 -0.61 0.34 -0.31
49 AT4G04560 transposable element gene -0.61 0.32 -0.3
50 AT5G61190 putative endonuclease or glycosyl hydrolase with C2H2-type
zinc finger domain		 0.61 0.29 -0.31
51 AT5G46440 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; BEST Arabidopsis thaliana protein match is:
Pentatricopeptide repeat (PPR) superfamily protein
(TAIR:AT5G46460.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.61 0.3 -0.31
52 AT3G61740 SET domain protein 14 ATX3, SET domain protein 14 0.61 0.32 -0.32
53 AT4G21110 G10 family protein -0.61 0.32 -0.33
54 AT1G09930 oligopeptide transporter 2 oligopeptide transporter 2,
oligopeptide transporter 2		 -0.61 0.31 -0.33
55 AT3G60600 vesicle associated protein (AT)VAP, vesicle associated
protein, VAP27,
VAMP/SYNAPTOBREVIN-ASSOCIATED
PROTEIN 27-1		 -0.61 0.32 -0.31
56 AT3G42460 transposable element gene 0.6 0.33 -0.31
57 AT1G33540 serine carboxypeptidase-like 18 serine carboxypeptidase-like 18 -0.6 0.33 -0.32
58 AT1G30010 Intron maturase, type II family protein 0.6 0.31 -0.3
59 AT3G13280 Putative endonuclease or glycosyl hydrolase 0.6 0.31 -0.3
60 AT1G53345 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant
structures; EXPRESSED DURING: 4 anthesis, F mature embryo
stage, petal differentiation and expansion stage, E
expanded cotyledon stage, D bilateral stage; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G09580.1); Has 201 Blast hits to 201 proteins in
75 species: Archae - 6; Bacteria - 102; Metazoa - 2; Fungi
- 0; Plants - 47; Viruses - 7; Other Eukaryotes - 37
(source: NCBI BLink).		 -0.6 0.29 -0.31
61 AT1G36020 BEST Arabidopsis thaliana protein match is: DEAD/DEAH box
RNA helicase family protein (TAIR:AT1G35530.1); Has 18
Blast hits to 18 proteins in 5 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.6 0.33 -0.34
62 AT2G27375 transposable element gene 0.6 0.31 -0.31
63 AT5G09770 Ribosomal protein L17 family protein -0.6 0.33 -0.34
64 AT5G07960 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0139
(InterPro:IPR005351); Has 193 Blast hits to 193 proteins in
75 species: Archae - 0; Bacteria - 0; Metazoa - 130; Fungi
- 0; Plants - 52; Viruses - 0; Other Eukaryotes - 11
(source: NCBI BLink).		 -0.6 0.31 -0.31
65 AT1G23820 spermidine synthase 1 spermidine synthase 1 -0.6 0.32 -0.31
66 AT4G11950 Protein of unknown function (DUF1191) 0.6 0.32 -0.32
67 AT3G23870 Protein of unknown function (DUF803) 0.59 0.29 -0.31
68 AT1G30560 Major facilitator superfamily protein glycerol-3-phosphate permease 3,
glycerol-3-phosphate permease 3		 0.59 0.3 -0.33
69 AT2G44590 DYNAMIN-like 1D DYNAMIN-like 1D, DYNAMIN-like 1D 0.59 0.32 -0.31
70 AT3G46430 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, mitochondrial respiratory chain complex III;
EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15
growth stages; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT5G59613.2); Has 51 Blast hits to 51
proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.59 0.33 -0.32
71 AT5G06520 SWAP (Suppressor-of-White-APricot)/surp domain-containing
protein		 -0.59 0.32 -0.33
72 AT3G51590 lipid transfer protein 12 lipid transfer protein 12 0.59 0.32 -0.28
73 AT3G42350 transposable element gene 0.59 0.34 -0.35
74 AT3G05500 Rubber elongation factor protein (REF) -0.59 0.31 -0.32
75 AT5G43000 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes -
339 (source: NCBI BLink).		 -0.59 0.31 -0.31
76 AT2G21770 cellulose synthase A9 CESA09, cellulose synthase A9 0.59 0.34 -0.29
77 AT5G08530 51 kDa subunit of complex I 51 kDa subunit of complex I -0.59 0.35 -0.32
78 AT3G04020 unknown protein; Has 26 Blast hits to 25 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 23; Viruses - 0; Other Eukaryotes - 3 (source:
NCBI BLink).		 -0.59 0.33 -0.31
79 AT5G25990 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast; BEST
Arabidopsis thaliana protein match is: Core-2/I-branching
beta-1,6-N-acetylglucosaminyltransferase family protein
(TAIR:AT5G25970.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.59 0.36 -0.31
80 AT1G04070 translocase of outer membrane 22-I ATTOM22-I, translocase of outer
membrane 22-I		 -0.59 0.35 -0.32
81 AT4G25550 Cleavage/polyadenylation specificity factor, 25kDa subunit -0.59 0.3 -0.29
82 AT2G15790 peptidyl-prolyl cis-trans isomerase / cyclophilin-40
(CYP40) / rotamase		 CYCLOPHILIN 40, SQUINT -0.58 0.29 -0.33
83 AT4G13960 F-box/RNI-like superfamily protein -0.58 0.34 -0.29
84 AT5G51870 AGAMOUS-like 71 AGAMOUS-like 71 0.58 0.32 -0.32
85 AT2G14835 RING/U-box superfamily protein -0.58 0.31 -0.35
86 AT5G09390 CD2-binding protein-related -0.58 0.3 -0.32
87 AT2G15780 Cupredoxin superfamily protein -0.58 0.32 -0.32
88 AT3G17980 Calcium-dependent lipid-binding (CaLB domain) family
protein		 Arabidopsis thaliana C2 domain, C2
domain		 0.58 0.34 -0.32
89 AT5G58280 AP2/B3-like transcriptional factor family protein -0.58 0.32 -0.32
90 AT2G37500 arginine biosynthesis protein ArgJ family -0.58 0.28 -0.31
91 AT5G49440 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.58 0.32 -0.31
92 AT2G07650 transposable element gene 0.58 0.32 -0.32
93 AT1G23220 Dynein light chain type 1 family protein -0.58 0.32 -0.32
94 AT2G37880 Protein of unknown function, DUF617 0.58 0.3 -0.31
95 AT2G04410 RPM1-interacting protein 4 (RIN4) family protein -0.58 0.32 -0.31
96 AT5G45010 DSS1 homolog on chromosome V DSS1 homolog on chromosome V, DSS1
homolog on chromosome V		 -0.58 0.35 -0.32
97 AT2G27900 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF2451, C-terminal (InterPro:IPR019514), Vacuolar protein
sorting-associated protein 54 (InterPro:IPR019515); Has 316
Blast hits to 252 proteins in 92 species: Archae - 0;
Bacteria - 2; Metazoa - 200; Fungi - 2; Plants - 68;
Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).		 0.58 0.33 -0.31
98 AT4G08190 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.57 0.34 -0.33
99 AT3G20950 cytochrome P450, family 705, subfamily A, polypeptide 32 cytochrome P450, family 705,
subfamily A, polypeptide 32		 -0.57 0.34 -0.29
100 AT2G36485 ENTH/VHS family protein -0.57 0.34 -0.3
101 AT5G16500 Protein kinase superfamily protein -0.57 0.32 -0.33
102 AT1G27650 U2 snRNP auxiliary factor small subunit, putative ATU2AF35A -0.57 0.3 -0.32
103 AT4G05550 transposable element gene -0.57 0.3 -0.31
104 AT1G69670 cullin 3B ARABIDOPSIS THALIANA CULLIN 3B,
cullin 3B		 -0.57 0.3 -0.32
105 AT4G38630 regulatory particle non-ATPase 10 ATMCB1, MULTIUBIQUITIN CHAIN
BINDING PROTEIN 1,
MULTIUBIQUITIN-CHAIN-BINDING
PROTEIN 1, regulatory particle
non-ATPase 10		 -0.57 0.31 -0.32
106 AT3G29010 Biotin/lipoate A/B protein ligase family -0.57 0.34 -0.29
107 AT2G15720 transposable element gene 0.57 0.33 -0.33
108 AT1G33070 MADS-box family protein 0.57 0.31 -0.32
109 AT5G54750 Transport protein particle (TRAPP) component -0.57 0.29 -0.32
110 AT5G27460 Tetratricopeptide repeat (TPR)-like superfamily protein -0.56 0.33 -0.32
111 AT2G36120 Glycine-rich protein family DEFECTIVELY ORGANIZED TRIBUTARIES
1		 -0.56 0.34 -0.33
112 AT2G43280 Far-red impaired responsive (FAR1) family protein -0.56 0.31 -0.31
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
113 C0197 Phosphatidylcholine-36:1 - Phosphatidylcholine-36:1 choline biosynthesis III,
diacylglycerol biosynthesis,
phospholipases,
triacylglycerol biosynthesis,
linoleate biosynthesis I,
phosphatidylcholine biosynthesis III,
glutathione redox reactions I 		0.63 0.52 -0.49 C0197
114 C0081 Digalactosyldiacylglycerol-36:2 - Digalactosyldiacylglycerol-36:2 triacylglycerol degradation,
linoleate biosynthesis I,
glycolipid biosynthesis,
glutathione redox reactions I 		0.62 0.5 -0.5 C0081
115 C0267 Zeatin cis-Zeatin cis-Zeatin cytokinins-O-glucoside biosynthesis,
cytokinins degradation,
cytokinins 7-N-glucoside biosynthesis,
cytokinins 9-N-glucoside biosynthesis,
cis-zeatin biosynthesis 		0.61 0.42 -0.43 C0267