AT3G42730 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT3G42730
Description transposable element gene
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G42730 transposable element gene 1 0.32 -0.29
2 AT5G14620 domains rearranged methyltransferase 2 DMT7, domains rearranged
methyltransferase 2		 -0.74 0.31 -0.3
3 AT4G03770 transposable element gene 0.73 0.3 -0.33
4 AT2G28680 RmlC-like cupins superfamily protein -0.72 0.32 -0.34
5 AT1G26830 cullin 3 cullin 3, cullin 3A, cullin 3,
cullin 3A		 0.7 0.32 -0.32
6 AT1G70920 homeobox-leucine zipper protein 18 homeobox-leucine zipper protein
18, homeobox-leucine zipper
protein 18		 0.69 0.31 -0.3
7 AT1G59535 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.68 0.32 -0.3
8 AT4G11970 YTH family protein -0.67 0.34 -0.3
9 AT5G22980 serine carboxypeptidase-like 47 serine carboxypeptidase-like 47 -0.67 0.32 -0.35
10 AT5G14890 NHL domain-containing protein 0.67 0.3 -0.3
11 AT3G29690 HXXXD-type acyl-transferase family protein 0.65 0.33 -0.32
12 AT3G28280 BEST Arabidopsis thaliana protein match is: F-box family
protein-related (TAIR:AT3G28330.1); Has 103 Blast hits to
100 proteins in 3 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 103; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.65 0.33 -0.33
13 AT2G16760 Calcium-dependent phosphotriesterase superfamily protein -0.65 0.32 -0.31
14 AT4G29340 profilin 4 profilin 4 0.65 0.32 -0.3
15 AT1G35380 transposable element gene 0.65 0.32 -0.31
16 AT1G30350 Pectin lyase-like superfamily protein -0.65 0.31 -0.3
17 AT4G03340 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 -0.65 0.31 -0.33
18 ATMG00510 NADH dehydrogenase subunit 7 NADH dehydrogenase subunit 7 0.65 0.33 -0.31
19 AT1G47350 F-box associated ubiquitination effector family protein 0.64 0.34 -0.3
20 AT1G43886 transposable element gene 0.64 0.31 -0.32
21 AT5G46310 WRKY family transcription factor -0.64 0.33 -0.32
22 AT5G26700 RmlC-like cupins superfamily protein -0.64 0.32 -0.3
23 AT5G28560 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
vacuole; Has 0 Blast hits to 0 proteins in 0 species
(source: NCBI BLink).		 0.64 0.31 -0.33
24 AT3G61800 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF2043 (InterPro:IPR018610), ENTH/VHS
(InterPro:IPR008942); Has 308 Blast hits to 279 proteins in
95 species: Archae - 2; Bacteria - 30; Metazoa - 120; Fungi
- 19; Plants - 44; Viruses - 2; Other Eukaryotes - 91
(source: NCBI BLink).		 -0.63 0.33 -0.29
25 AT4G10950 SGNH hydrolase-type esterase superfamily protein -0.63 0.31 -0.3
26 AT3G48900 single-stranded DNA endonuclease family protein -0.63 0.3 -0.29
27 AT1G20280 homeobox-leucine zipper protein-related -0.63 0.32 -0.3
28 AT5G06839 bZIP transcription factor family protein bZIP65, TGACG (TGA) motif-binding
protein 10		 -0.63 0.3 -0.32
29 AT4G11690 Pentatricopeptide repeat (PPR-like) superfamily protein -0.62 0.32 -0.3
30 AT3G42900 transposable element gene 0.62 0.32 -0.31
31 AT3G51680 NAD(P)-binding Rossmann-fold superfamily protein AtSDR2, short-chain
dehydrogenase/reductase 2		 -0.61 0.3 -0.33
32 AT5G55900 Sucrase/ferredoxin-like family protein -0.61 0.31 -0.32
33 AT5G58280 AP2/B3-like transcriptional factor family protein 0.61 0.32 -0.33
34 AT2G01790 TRAF-like family protein -0.61 0.31 -0.3
35 AT3G47700 RINT-1 / TIP-1 family maigo2 0.61 0.31 -0.32
36 AT5G46730 glycine-rich protein 0.61 0.3 -0.33
37 AT3G05460 sporozoite surface protein-related 0.61 0.32 -0.31
38 AT3G49162 pseudogene of glycoside hydrolase family 28 protein 0.61 0.32 -0.31
39 AT2G23800 geranylgeranyl pyrophosphate synthase 2 geranylgeranyl pyrophosphate
synthase 2, GERANYLGERANYL
PYROPHOSPHATE SYNTHASE 5		 0.61 0.29 -0.32
40 AT1G55390 Cysteine/Histidine-rich C1 domain family protein 0.61 0.32 -0.29
41 AT3G57270 beta-1,3-glucanase 1 beta-1,3-glucanase 1 0.61 0.3 -0.31
42 AT1G45545 Plant protein of unknown function (DUF827) -0.61 0.31 -0.33
43 AT5G22870 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 0.61 0.33 -0.35
44 AT2G01280 Cyclin/Brf1-like TBP-binding protein maternal effect embryo arrest 65 -0.6 0.32 -0.3
45 AT3G58080 unknown protein; Has 3 Blast hits to 3 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.6 0.33 -0.32
46 AT5G12180 calcium-dependent protein kinase 17 calcium-dependent protein kinase
17		 -0.6 0.33 -0.32
47 AT5G48140 Pectin lyase-like superfamily protein 0.6 0.31 -0.34
48 AT2G26470 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF159 (InterPro:IPR003738); Has 3646
Blast hits to 3636 proteins in 1001 species: Archae - 41;
Bacteria - 1922; Metazoa - 142; Fungi - 125; Plants - 44;
Viruses - 14; Other Eukaryotes - 1358 (source: NCBI BLink).		 -0.59 0.32 -0.32
49 AT2G18720 Translation elongation factor EF1A/initiation factor
IF2gamma family protein		 0.59 0.31 -0.33
50 AT2G32690 glycine-rich protein 23 GLYCINE-RICH PROTEIN 23,
glycine-rich protein 23		 0.59 0.3 -0.3
51 AT3G42100 transposable element gene -0.59 0.31 -0.31
52 AT2G13550 unknown protein; Has 23 Blast hits to 20 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 9 (source: NCBI
BLink).		 -0.59 0.31 -0.31
53 AT4G38000 DNA binding with one finger 4.7 DNA binding with one finger 4.7 -0.59 0.32 -0.29
54 AT2G06640 transposable element gene 0.59 0.3 -0.3
55 AT4G39753 Galactose oxidase/kelch repeat superfamily protein 0.58 0.32 -0.32
56 AT2G41060 RNA-binding (RRM/RBD/RNP motifs) family protein -0.58 0.3 -0.3
57 AT4G18470 negative regulator of systemic acquired resistance (SNI1) SUPPRESSOR OF NPR1-1, INDUCIBLE 1 -0.58 0.33 -0.31
58 AT3G42350 transposable element gene -0.58 0.33 -0.31
59 AT5G13130 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
family protein		 0.58 0.31 -0.33
60 AT5G51160 Ankyrin repeat family protein -0.58 0.3 -0.32
61 AT5G24110 WRKY DNA-binding protein 30 ARABIDOPSIS THALIANA WRKY
DNA-BINDING PROTEIN 30, WRKY
DNA-binding protein 30		 0.58 0.34 -0.32
62 AT3G49820 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G65925.1); Has 23 Blast hits
to 23 proteins in 7 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.58 0.31 -0.3
63 AT1G69840 SPFH/Band 7/PHB domain-containing membrane-associated
protein family		 0.58 0.31 -0.32
64 AT2G02380 glutathione S-transferase (class zeta) 2 glutathione S-transferase (class
zeta) 2, glutathione S-transferase
(class zeta) 2		 -0.58 0.31 -0.33
65 AT4G02190 Cysteine/Histidine-rich C1 domain family protein 0.58 0.33 -0.32
66 AT5G26120 alpha-L-arabinofuranosidase 2 alpha-L-arabinofuranosidase 2,
ARABIDOPSIS THALIANA
ALPHA-L-ARABINOFURANOSIDASE 2		 0.58 0.31 -0.32
67 AT1G30560 Major facilitator superfamily protein glycerol-3-phosphate permease 3,
glycerol-3-phosphate permease 3		 -0.57 0.31 -0.33
68 AT4G39160 Homeodomain-like superfamily protein -0.57 0.32 -0.32
69 AT1G34080 transposable element gene -0.57 0.3 -0.31
70 AT4G07920 transposable element gene 0.57 0.32 -0.31
71 AT2G13660 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.57 0.32 -0.3
72 AT1G75430 BEL1-like homeodomain 11 BEL1-like homeodomain 11 -0.57 0.3 -0.33
73 AT3G17620 F-box and associated interaction domains-containing protein 0.57 0.32 -0.31
74 AT3G45690 Major facilitator superfamily protein -0.56 0.31 -0.32
75 AT1G35970 transposable element gene -0.56 0.33 -0.33
76 AT5G32470 Haem oxygenase-like, multi-helical -0.56 0.31 -0.32
77 AT2G45780 other RNA -0.56 0.31 -0.29
78 AT4G03330 syntaxin of plants 123 ATSYP123, syntaxin of plants 123 -0.56 0.31 -0.33
79 AT1G63200 Cystatin/monellin superfamily protein -0.56 0.31 -0.3
80 AT4G14810 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.56 0.32 -0.31
81 AT1G54790 GDSL-like Lipase/Acylhydrolase superfamily protein 0.56 0.34 -0.32
82 AT5G51900 Cytochrome P450 family protein 0.56 0.31 -0.31
83 AT3G31920 transposable element gene -0.56 0.3 -0.3
84 AT2G48030 DNAse I-like superfamily protein 0.56 0.32 -0.32
85 AT1G25270 nodulin MtN21 /EamA-like transporter family protein -0.56 0.32 -0.31
86 AT3G50120 Plant protein of unknown function (DUF247) 0.55 0.33 -0.31
87 AT5G40560 DegP protease 13 DegP protease 13 0.55 0.32 -0.31
88 AT3G03400 EF hand calcium-binding protein family 0.55 0.29 -0.31
89 AT1G16440 root hair specific 3 root hair specific 3 0.55 0.33 -0.31
90 AT5G25750 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.55 0.3 -0.32
91 AT4G33390 Plant protein of unknown function (DUF827) 0.55 0.31 -0.33
92 AT3G18570 Oleosin family protein -0.55 0.33 -0.31
93 AT5G45080 phloem protein 2-A6 phloem protein 2-A6, phloem
protein 2-A6		 -0.55 0.28 -0.31
94 AT4G24600 unknown protein; Has 10 Blast hits to 10 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 10; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.55 0.33 -0.31
95 AT4G19350 embryo defective 3006 embryo defective 3006 -0.55 0.29 -0.31
96 AT5G22720 F-box/RNI-like superfamily protein -0.55 0.31 -0.33
97 AT2G39530 Uncharacterised protein family (UPF0497) 0.54 0.3 -0.35
98 AT3G02670 Glycine-rich protein family 0.54 0.31 -0.31
99 AT5G42640 C2H2 and C2HC zinc fingers superfamily protein 0.54 0.34 -0.33
100 AT5G58630 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.54 0.32 -0.29
101 AT5G01440 BEST Arabidopsis thaliana protein match is: Insulinase
(Peptidase family M16) family protein (TAIR:AT1G06900.1);
Has 1807 Blast hits to 1807 proteins in 277 species: Archae
- 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants -
385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI
BLink).		 0.54 0.29 -0.33
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
102 C0115 Homoserine D,L-Homoserine Homoserine homoserine biosynthesis,
threonine biosynthesis from homoserine,
methionine biosynthesis II 		0.57 0.31 -0.33 C0115