AT3G42860 : -
Query Information
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AGICode AT3G42860
Description zinc knuckle (CCHC-type) family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G42860 zinc knuckle (CCHC-type) family protein 1 0.3 -0.32
2 AT4G35900 Basic-leucine zipper (bZIP) transcription factor family
protein		 atbzip14, FD, FD-1 -0.74 0.31 -0.32
3 AT3G24280 small acidic protein 2 small acidic protein 2 -0.73 0.31 -0.32
4 AT4G37950 Rhamnogalacturonate lyase family protein -0.7 0.3 -0.33
5 AT5G63340 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.7 0.31 -0.31
6 AT2G30780 Tetratricopeptide repeat (TPR)-like superfamily protein -0.69 0.31 -0.3
7 AT4G18465 RNA helicase family protein 0.68 0.31 -0.31
8 AT1G66170 RING/FYVE/PHD zinc finger superfamily protein MALE MEIOCYTE DEATH 1 -0.68 0.32 -0.32
9 AT3G24680 transposable element gene -0.68 0.31 -0.31
10 AT1G48095 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G36960.1); Has 82 Blast hits
to 82 proteins in 3 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.67 0.34 -0.3
11 AT5G66890 Leucine-rich repeat (LRR) family protein -0.67 0.32 -0.31
12 AT4G13820 Leucine-rich repeat (LRR) family protein -0.67 0.31 -0.32
13 AT2G03320 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; Has 4 Blast hits to 4 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.67 0.3 -0.31
14 AT4G29580 Cytidine/deoxycytidylate deaminase family protein -0.67 0.31 -0.33
15 AT4G25350 EXS (ERD1/XPR1/SYG1) family protein SHORT HYPOCOTYL UNDER BLUE1 -0.67 0.3 -0.31
16 AT3G32220 transposable element gene 0.67 0.32 -0.33
17 AT1G34210 somatic embryogenesis receptor-like kinase 2 ATSERK2, somatic embryogenesis
receptor-like kinase 2		 -0.66 0.32 -0.3
18 AT5G65450 ubiquitin-specific protease 17 ubiquitin-specific protease 17 -0.66 0.31 -0.32
19 AT1G28135 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; Has 7 Blast hits to 7 proteins in 1 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.66 0.32 -0.3
20 AT3G52310 ABC-2 type transporter family protein ATP-binding cassette G27 -0.66 0.33 -0.31
21 AT2G29820 Galactose oxidase/kelch repeat superfamily protein -0.66 0.32 -0.32
22 AT3G21175 ZIM-like 1 GATA TRANSCRIPTION FACTOR 24,
TIFY2B, ZIM LIKE 1, ZIM-like 1		 0.66 0.32 -0.32
23 AT1G18340 basal transcription factor complex subunit-related -0.66 0.31 -0.31
24 AT2G38650 galacturonosyltransferase 7 galacturonosyltransferase 7, LIKE
GLYCOSYL TRANSFERASE 7		 -0.66 0.29 -0.32
25 AT1G18220 purine permease 9 purine permease 9, purine permease
9		 -0.66 0.32 -0.32
26 AT3G03370 BEST Arabidopsis thaliana protein match is: DegP protease 7
(TAIR:AT3G03380.1); Has 55 Blast hits to 55 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 55; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.66 0.31 -0.31
27 AT5G61740 ABC2 homolog 14 ATP-binding cassette A10,
ARABIDOPSIS THALIANA ABC2 HOMOLOG
14, ABC2 homolog 14		 -0.66 0.31 -0.33
28 AT4G30590 early nodulin-like protein 12 AtENODL12, early nodulin-like
protein 12		 -0.65 0.33 -0.31
29 AT3G28960 Transmembrane amino acid transporter family protein -0.65 0.31 -0.3
30 AT1G58300 heme oxygenase 4 heme oxygenase 4 -0.65 0.32 -0.31
31 AT5G37620 Cysteine/Histidine-rich C1 domain family protein -0.65 0.31 -0.32
32 AT2G40440 BTB/POZ domain-containing protein -0.65 0.31 -0.31
33 AT1G26800 RING/U-box superfamily protein 0.65 0.31 -0.32
34 AT3G10240 F-box and associated interaction domains-containing protein -0.64 0.31 -0.31
35 AT5G14670 ADP-ribosylation factor A1B ADP-ribosylation factor A1B,
ADP-ribosylation factor A1B		 -0.64 0.31 -0.3
36 AT1G49150 unknown protein; Has 6 Blast hits to 6 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.64 0.31 -0.32
37 AT1G32000 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT5G38190.1); Has 14 Blast hits to 14
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 14; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.64 0.31 -0.27
38 AT3G57920 squamosa promoter binding protein-like 15 squamosa promoter binding
protein-like 15		 -0.64 0.31 -0.32
39 AT1G31530 DNAse I-like superfamily protein -0.64 0.32 -0.31
40 AT5G57690 diacylglycerol kinase 4 ATDGK4, diacylglycerol kinase 4 -0.64 0.33 -0.32
41 AT3G46180 UDP-galactose transporter 5 UDP-GALACTOSE TRANSPORTER 5,
UDP-galactose transporter 5		 -0.64 0.31 -0.33
42 AT1G54450 Calcium-binding EF-hand family protein -0.64 0.3 -0.31
43 AT1G68090 annexin 5 annexin 5, ANNEXIN ARABIDOPSIS
THALIANA 5		 -0.64 0.3 -0.3
44 AT1G49190 response regulator 19 response regulator 19, response
regulator 19		 -0.64 0.3 -0.34
45 AT5G09370 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.64 0.32 -0.31
46 AT4G13060 F-box associated ubiquitination effector family protein -0.64 0.31 -0.33
47 AT2G15610 Protein of unknown function (DUF1685) -0.64 0.32 -0.33
48 AT4G24650 isopentenyltransferase 4 ARABIDOPSIS THALIANA
ISOPENTENYLTRANSFERASE 4,
isopentenyltransferase 4		 -0.64 0.32 -0.31
49 AT4G04980 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G11070.1); Has 23100 Blast
hits to 15699 proteins in 1063 species: Archae - 116;
Bacteria - 2262; Metazoa - 8308; Fungi - 3268; Plants -
3181; Viruses - 958; Other Eukaryotes - 5007 (source: NCBI
BLink).		 -0.63 0.31 -0.32
50 AT5G38460 ALG6, ALG8 glycosyltransferase family -0.63 0.32 -0.32
51 AT5G44330 Tetratricopeptide repeat (TPR)-like superfamily protein -0.63 0.3 -0.34
52 AT3G58280 Arabidopsis phospholipase-like protein (PEARLI 4) with
TRAF-like domain		 -0.63 0.3 -0.34
53 AT3G08960 ARM repeat superfamily protein -0.63 0.3 -0.32
54 AT3G51590 lipid transfer protein 12 lipid transfer protein 12 -0.63 0.31 -0.31
55 AT5G17140 Cysteine proteinases superfamily protein -0.63 0.34 -0.32
56 AT5G35470 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.63 0.32 -0.3
57 AT1G15880 golgi snare 11 atgos11, golgi snare 11 0.63 0.34 -0.33
58 AT4G26890 mitogen-activated protein kinase kinase kinase 16 mitogen-activated protein kinase
kinase kinase 16		 0.63 0.33 -0.31
59 AT3G27540 beta-1,4-N-acetylglucosaminyltransferase family protein -0.63 0.31 -0.3
60 AT1G28270 ralf-like 4 ralf-like 4 -0.63 0.31 -0.3
61 AT4G12380 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.63 0.31 -0.3
62 AT2G16810 F-box and associated interaction domains-containing protein -0.63 0.34 -0.32
63 AT5G38340 Disease resistance protein (TIR-NBS-LRR class) family -0.62 0.29 -0.32
64 AT5G24230 Lipase class 3-related protein -0.62 0.31 -0.33
65 AT1G18510 tetraspanin 16 tetraspanin 16 -0.62 0.32 -0.33
66 AT2G30650 ATP-dependent caseinolytic (Clp) protease/crotonase family
protein		 0.62 0.31 -0.3
67 AT3G43630 Vacuolar iron transporter (VIT) family protein -0.62 0.32 -0.31
68 AT5G30480 transposable element gene 0.61 0.32 -0.32
69 AT5G35830 Ankyrin repeat family protein -0.61 0.32 -0.32
70 AT3G24780 Uncharacterised conserved protein UCP015417, vWA -0.61 0.28 -0.35
71 AT3G54490 RNA polymerase II fifth largest subunit, E RNA polymerase II fifth largest
subunit, E		 -0.61 0.31 -0.33
72 AT5G20330 beta-1,3-glucanase 4 beta-1,3-glucanase 4 -0.61 0.33 -0.31
73 AT1G48910 Flavin-containing monooxygenase family protein YUCCA 10 -0.61 0.31 -0.29
74 AT4G35370 Transducin/WD40 repeat-like superfamily protein -0.61 0.31 -0.32
75 AT4G11730 Cation transporter/ E1-E2 ATPase family protein 0.61 0.32 -0.32
76 AT1G62340 PA-domain containing subtilase family protein ABNORMAL LEAF-SHAPE, ABNORMAL
LEAF-SHAPE 1		 0.61 0.33 -0.31
77 AT2G31210 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.61 0.34 -0.31
78 AT2G17260 glutamate receptor 2 ATGLR2, ATGLR3.1, glutamate
receptor 2, GLR3.1		 -0.61 0.31 -0.29
79 AT2G40220 Integrase-type DNA-binding superfamily protein ABA INSENSITIVE 4, ATABI4, GLUCOSE
INSENSITIVE 6, IMPAIRED SUCROSE
INDUCTION 3, SALOBRENO 5,
SUGAR-INSENSITIVE 5, SUCROSE
UNCOUPLED 6		 -0.61 0.33 -0.31
80 AT1G58410 Disease resistance protein (CC-NBS-LRR class) family -0.6 0.3 -0.3
81 AT5G22960 alpha/beta-Hydrolases superfamily protein -0.6 0.32 -0.31
82 AT2G07740 transposable element gene -0.6 0.31 -0.31
83 AT5G44850 Protein with RNI-like/FBD-like domains -0.6 0.33 -0.32
84 AT4G19740 Glycosyl hydrolase superfamily protein -0.6 0.33 -0.31
85 AT2G39520 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.6 0.3 -0.3
86 AT2G07360 SH3 domain-containing protein -0.6 0.31 -0.31
87 AT3G55160 unknown protein; EXPRESSED IN: 11 plant structures;
EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal
differentiation and expansion stage, E expanded cotyledon
stage, D bilateral stage; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF2428, death-receptor-like
(InterPro:IPR019442); Has 357 Blast hits to 330 proteins in
163 species: Archae - 0; Bacteria - 0; Metazoa - 144; Fungi
- 118; Plants - 50; Viruses - 0; Other Eukaryotes - 45
(source: NCBI BLink).		 -0.6 0.31 -0.29
88 AT5G39420 CDC2C CDC2C 0.6 0.3 -0.33
89 AT2G29780 Galactose oxidase/kelch repeat superfamily protein -0.6 0.3 -0.33
90 AT4G04050 transposable element gene -0.6 0.33 -0.33
91 AT5G06020 Plant self-incompatibility protein S1 family 0.6 0.31 -0.31
92 AT3G45810 ferric reductase-like transmembrane component family
protein		 -0.6 0.32 -0.34
93 AT2G33410 RNA-binding (RRM/RBD/RNP motifs) family protein -0.6 0.31 -0.29
94 AT1G79100 arginine/serine-rich protein-related -0.6 0.34 -0.33
95 AT4G28395 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 ANTHER 7, ARABIDOPSIS THALIANA
ANTHER 7		 -0.6 0.32 -0.32
96 AT3G15355 ubiquitin-conjugating enzyme 25 PHO2 FAMILY UBIQUITIN CONJUGATION
ENZYME 1, ubiquitin-conjugating
enzyme 25		 0.59 0.32 -0.3
97 AT3G51520 diacylglycerol acyltransferase family 0.59 0.33 -0.31
98 AT3G26790 AP2/B3-like transcriptional factor family protein FUSCA 3 0.59 0.3 -0.33
99 AT3G62230 F-box family protein DUO1-activated F-box 1 0.58 0.32 -0.29
100 AT5G09390 CD2-binding protein-related 0.58 0.32 -0.32
101 AT5G35820 transposable element gene 0.58 0.31 -0.31
102 AT2G06640 transposable element gene 0.58 0.31 -0.34
103 AT3G21660 UBX domain-containing protein 0.57 0.3 -0.31
104 AT2G23640 Reticulan like protein B13 Reticulan like protein B13 0.57 0.3 -0.33
105 AT1G68360 C2H2 and C2HC zinc fingers superfamily protein 0.57 0.34 -0.32
106 AT3G23260 F-box and associated interaction domains-containing protein 0.56 0.32 -0.35
107 AT4G07540 transposable element gene 0.56 0.33 -0.32
108 AT3G07710 BEST Arabidopsis thaliana protein match is: DNA-binding
storekeeper protein-related transcriptional regulator
(TAIR:AT2G25650.1); Has 38 Blast hits to 38 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.56 0.3 -0.33
109 AT1G26530 PIN domain-like family protein 0.55 0.31 -0.3
110 AT5G43480 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.55 0.32 -0.31
111 AT5G14300 prohibitin 5 prohibitin 5, prohibitin 5 0.55 0.31 -0.31
112 AT4G15030 CONTAINS InterPro DOMAIN/s: Folate-sensitive fragile site
protein Fra10Ac1 (InterPro:IPR019129); Has 8455 Blast hits
to 5700 proteins in 376 species: Archae - 6; Bacteria -
264; Metazoa - 3820; Fungi - 744; Plants - 645; Viruses -
76; Other Eukaryotes - 2900 (source: NCBI BLink).		 0.55 0.33 -0.31
113 AT1G17040 SH2 domain protein A ARABIDOPSIS THALIANA SH2 DOMAIN
PROTEIN A, SH2 domain protein A,
STAT-TYPE LINKER-SH2 DOMAIN FACTOR
A		 0.55 0.3 -0.32
114 AT4G22620 SAUR-like auxin-responsive protein family 0.55 0.3 -0.32
115 AT4G03600 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G03730.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.54 0.31 -0.33
116 AT2G18610 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.54 0.33 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
117 C0147 Mannose D-Mannose D-Mannose mannose degradation,
mannitol degradation II 		0.54 0.32 -0.33 C0147