AT3G42250 : -
Query Information
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AGICode AT3G42250
Description transposable element gene
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G42250 transposable element gene 1 0.34 -0.3
2 AT5G45850 Protein of unknown function (DUF688) 0.69 0.3 -0.31
3 AT1G16460 rhodanese homologue 2 ARABIDOPSIS THALIANA
MERCAPTOPYRUVATE SULFURTRANSFERASE
2, rhodanese homologue 2,
MERCAPTOPYRUVATE SULFURTRANSFERASE
2, rhodanese homologue 2,
SULFURTRANSFERASE 2,
SULFURTRANSFERASE 2		 0.67 0.32 -0.32
4 AT3G24360 ATP-dependent caseinolytic (Clp) protease/crotonase family
protein		 0.67 0.29 -0.34
5 AT2G07510 transposable element gene 0.67 0.3 -0.34
6 AT3G22810 Plant protein of unknown function (DUF828) with plant
pleckstrin homology-like region		 0.66 0.31 -0.32
7 AT2G15740 C2H2-like zinc finger protein 0.66 0.3 -0.33
8 AT1G15920 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 -0.66 0.29 -0.33
9 AT2G47660 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.65 0.3 -0.32
10 AT5G53280 plastid division1 PLASTID DIVISION1 0.65 0.33 -0.32
11 AT3G03380 DegP protease 7 degradation of periplasmic
proteins 7, DegP protease 7		 -0.65 0.3 -0.31
12 AT2G03630 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G74220.1); Has 126 Blast hits
to 126 proteins in 28 species: Archae - 0; Bacteria - 6;
Metazoa - 7; Fungi - 5; Plants - 87; Viruses - 0; Other
Eukaryotes - 21 (source: NCBI BLink).		 0.65 0.3 -0.31
13 AT3G43750 RING/U-box protein with C6HC-type zinc finger domain -0.65 0.33 -0.32
14 AT1G73440 calmodulin-related 0.64 0.32 -0.32
15 AT4G01390 TRAF-like family protein 0.64 0.33 -0.32
16 AT3G46900 copper transporter 2 copper transporter 2 0.64 0.3 -0.31
17 AT2G31970 DNA repair-recombination protein (RAD50) ATRAD50, RAD50 -0.63 0.31 -0.32
18 AT4G15230 pleiotropic drug resistance 2 ATP-binding cassette G30, ATPDR2,
pleiotropic drug resistance 2		 -0.62 0.32 -0.3
19 AT4G29090 Ribonuclease H-like superfamily protein -0.62 0.31 -0.33
20 AT1G71760 unknown protein; Has 92 Blast hits to 92 proteins in 41
species: Archae - 0; Bacteria - 0; Metazoa - 44; Fungi - 0;
Plants - 32; Viruses - 0; Other Eukaryotes - 16 (source:
NCBI BLink).		 0.62 0.32 -0.33
21 AT2G23340 DREB and EAR motif protein 3 DREB and EAR motif protein 3 0.62 0.31 -0.31
22 AT2G07320 transposable element gene -0.62 0.35 -0.31
23 AT3G50370 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 26 plant
structures; EXPRESSED DURING: 15 growth stages; Has 27734
Blast hits to 16708 proteins in 1259 species: Archae - 81;
Bacteria - 3434; Metazoa - 10876; Fungi - 2514; Plants -
987; Viruses - 212; Other Eukaryotes - 9630 (source: NCBI
BLink).		 -0.61 0.32 -0.31
24 AT2G16835 Aquaporin-like superfamily protein -0.61 0.29 -0.32
25 AT1G49570 Peroxidase superfamily protein -0.61 0.34 -0.33
26 AT5G37980 Zinc-binding dehydrogenase family protein 0.61 0.3 -0.31
27 AT4G23330 BEST Arabidopsis thaliana protein match is: eukaryotic
translation initiation factor 3A (TAIR:AT4G11420.1); Has 63
Blast hits to 55 proteins in 14 species: Archae - 0;
Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 62; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.61 0.31 -0.3
28 AT5G50130 NAD(P)-binding Rossmann-fold superfamily protein 0.6 0.32 -0.33
29 AT5G44610 microtubule-associated protein 18 microtubule-associated protein 18,
PLASMA MEMBRANE ASSOCIATED
CA2+-BINDING PROTEIN-2		 -0.6 0.32 -0.32
30 AT2G39705 ROTUNDIFOLIA like 8 DEVIL 11, ROTUNDIFOLIA like 8 -0.6 0.3 -0.3
31 AT5G33350 pseudogene, similar to P0406H10.5, nucleoid DNA-binding
protein cnd41, chloroplast - Nicotiana tabacum, PIR:T01996;
blastp match of 37% identity and 1.5e-57 P-value to
GP|9711879|dbj|BAB07973.1||AP002524 P0406H10.5 {Oryza
sativa (japonica cultivar-group)}		 0.6 0.34 -0.33
32 AT4G10280 RmlC-like cupins superfamily protein 0.6 0.31 -0.31
33 AT2G05980 transposable element gene -0.6 0.32 -0.29
34 AT2G46360 unknown protein; Has 5 Blast hits to 5 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.59 0.31 -0.31
35 AT4G34430 DNA-binding family protein SWITCH/SUCROSE NONFERMENTING 3D,
CHB3		 -0.59 0.3 -0.29
36 AT3G06160 AP2/B3-like transcriptional factor family protein 0.59 0.3 -0.32
37 AT3G47010 Glycosyl hydrolase family protein -0.59 0.3 -0.31
38 AT3G08980 Peptidase S24/S26A/S26B/S26C family protein -0.59 0.31 -0.3
39 AT3G32940 RNA-binding KH domain-containing protein -0.58 0.31 -0.31
40 AT5G34895 transposable element gene 0.58 0.3 -0.33
41 AT1G34510 Peroxidase superfamily protein -0.58 0.35 -0.33
42 AT5G58010 LJRHL1-like 3 LJRHL1-like 3 -0.58 0.32 -0.32
43 AT1G70890 MLP-like protein 43 MLP-like protein 43 0.58 0.33 -0.34
44 AT1G51700 DOF zinc finger protein 1 DOF zinc finger protein 1, DOF
zinc finger protein 1		 0.58 0.32 -0.33
45 AT1G50470 F-box associated ubiquitination effector family protein -0.57 0.32 -0.3
46 AT5G22410 root hair specific 18 root hair specific 18 -0.57 0.33 -0.31
47 AT3G04740 RNA polymerase II transcription mediators ARABIDOPSIS MEDIATOR COMPONENTS
14, MEDIATOR COMPONENTS 14,
STRUWWELPETER		 -0.57 0.31 -0.3
48 AT3G54580 Proline-rich extensin-like family protein -0.57 0.32 -0.31
49 AT5G04460 RING/U-box superfamily protein -0.57 0.31 -0.31
50 AT1G35647 transposable element gene 0.57 0.32 -0.29
51 AT1G09570 phytochrome A FAR RED ELONGATED HYPOCOTYL 2, FAR
RED ELONGATED 1, ELONGATED
HYPOCOTYL 8, phytochrome A		 -0.57 0.33 -0.32
52 AT4G00660 RNAhelicase-like 8 ATRH8, RNAhelicase-like 8 -0.57 0.32 -0.29
53 AT1G32600 F-box associated ubiquitination effector family protein 0.57 0.33 -0.31
54 AT1G30020 Protein of unknown function, DUF538 -0.57 0.3 -0.32
55 AT5G59720 heat shock protein 18.2 heat shock protein 18.2 0.56 0.32 -0.3
56 AT5G11040 TRS120 AtTRS120, TRS120 -0.56 0.3 -0.32
57 AT5G60260 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.56 0.28 -0.32
58 AT2G02640 Cysteine/Histidine-rich C1 domain family protein 0.56 0.32 -0.3
59 AT4G36630 Vacuolar sorting protein 39 EMBRYO DEFECTIVE 2754 -0.56 0.31 -0.31
60 AT4G40090 arabinogalactan protein 3 arabinogalactan protein 3 -0.56 0.33 -0.33
61 AT5G60100 pseudo-response regulator 3 pseudo-response regulator 3,
pseudo-response regulator 3		 -0.56 0.3 -0.31
62 AT1G03890 RmlC-like cupins superfamily protein -0.56 0.31 -0.31
63 AT2G14230 transposable element gene 0.56 0.33 -0.32
64 AT1G12040 leucine-rich repeat/extensin 1 leucine-rich repeat/extensin 1 -0.55 0.31 -0.31
65 AT1G68270 AMP-dependent synthetase and ligase family protein -0.55 0.31 -0.31
66 AT5G46200 Protein of Unknown Function (DUF239) 0.55 0.32 -0.31
67 AT3G06940 transposable element gene -0.55 0.33 -0.33
68 AT3G44080 F-box family protein 0.55 0.32 -0.33
69 AT1G30455 transcription regulators;translation initiation
factors;zinc ion binding;transcription activators		 0.55 0.33 -0.33
70 AT2G44000 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 0.55 0.31 -0.33
71 AT2G42090 actin 9 actin 9 -0.55 0.31 -0.32
72 AT2G13430 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.55 0.32 -0.32
73 AT3G15200 Tetratricopeptide repeat (TPR)-like superfamily protein -0.55 0.33 -0.32
74 AT3G27785 myb domain protein 118 ATMYB118, myb domain protein 118,
PLANT GROWTH ACTIVATOR 37		 0.55 0.31 -0.31
75 AT2G10780 transposable element gene 0.55 0.32 -0.31
76 AT1G01750 actin depolymerizing factor 11 actin depolymerizing factor 11 -0.55 0.33 -0.31
77 AT3G60860 SEC7-like guanine nucleotide exchange family protein -0.55 0.3 -0.32
78 AT4G00890 proline-rich family protein 0.54 0.32 -0.31
79 AT5G10680 calmodulin-binding protein-related -0.54 0.32 -0.33
80 AT2G47120 NAD(P)-binding Rossmann-fold superfamily protein 0.54 0.34 -0.31
81 AT4G26770 Phosphatidate cytidylyltransferase family protein -0.54 0.3 -0.3
82 AT1G71340 PLC-like phosphodiesterases superfamily protein AtGDPD4, glycerophosphodiester
phosphodiesterase 4		 0.54 0.31 -0.31
83 AT1G53360 F-box associated ubiquitination effector family protein 0.54 0.3 -0.32
84 AT5G60440 AGAMOUS-like 62 AGAMOUS-like 62 0.54 0.31 -0.33
85 AT3G26614 transposable element gene -0.54 0.31 -0.32
86 AT1G32840 transposable element gene 0.54 0.3 -0.33
87 AT3G44760 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: root, flower; EXPRESSED
DURING: petal differentiation and expansion stage; BEST
Arabidopsis thaliana protein match is: Protein of unknown
function (DUF626) (TAIR:AT3G44770.1); Has 9 Blast hits to 9
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 9; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.54 0.32 -0.3
88 AT5G61350 Protein kinase superfamily protein -0.53 0.3 -0.31
89 AT1G11470 Pentatricopeptide repeat (PPR) superfamily protein -0.53 0.33 -0.3
90 AT1G66720 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.53 0.32 -0.32
91 AT2G07705 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G65346.1); Has 2 Blast hits to
2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.53 0.33 -0.32
92 AT2G14210 AGAMOUS-like 44 AGAMOUS-like 44, ARABIDOPSIS
NITRATE REGULATED 1		 -0.53 0.3 -0.3
93 AT1G52580 RHOMBOID-like protein 5 RHOMBOID-like protein 5,
RHOMBOID-like protein 5		 -0.52 0.29 -0.32
94 AT1G01960 SEC7-like guanine nucleotide exchange family protein embryo sac development arrest 10 -0.52 0.34 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
95 C0201 Phosphatidylglycerol-32:1 - Phosphatidylglycerol-32:1 cardiolipin biosynthesis II,
linoleate biosynthesis I,
glycerophosphodiester degradation,
glutathione redox reactions I 		-0.53 0.34 -0.34