AT3G42260 : -
Query Information
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AGICode AT3G42260
Description transposable element gene
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G42260 transposable element gene 1 0.32 -0.31
2 AT5G07310 Integrase-type DNA-binding superfamily protein 0.7 0.33 -0.32
3 AT1G56160 myb domain protein 72 ARABIDOPSIS THALIANA MYB DOMAIN
PROTEIN 72, myb domain protein 72		 -0.68 0.32 -0.31
4 AT1G29220 transcriptional regulator family protein 0.67 0.29 -0.33
5 AT5G61980 ARF-GAP domain 1 ARF-GAP domain 1 -0.65 0.33 -0.37
6 AT1G16460 rhodanese homologue 2 ARABIDOPSIS THALIANA
MERCAPTOPYRUVATE SULFURTRANSFERASE
2, rhodanese homologue 2,
MERCAPTOPYRUVATE SULFURTRANSFERASE
2, rhodanese homologue 2,
SULFURTRANSFERASE 2,
SULFURTRANSFERASE 2		 0.65 0.32 -0.32
7 AT2G10650 transposable element gene 0.65 0.32 -0.32
8 AT2G34370 Pentatricopeptide repeat (PPR) superfamily protein 0.65 0.31 -0.29
9 AT1G07460 Concanavalin A-like lectin family protein -0.64 0.3 -0.32
10 AT2G30260 U2 small nuclear ribonucleoprotein B U2 small nuclear ribonucleoprotein
B		 -0.64 0.31 -0.33
11 AT2G15930 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.64 0.32 -0.3
12 AT2G22030 Galactose oxidase/kelch repeat superfamily protein 0.64 0.32 -0.31
13 AT2G07110 BEST Arabidopsis thaliana protein match is: Ribosomal
protein S5 domain 2-like superfamily protein
(TAIR:AT3G46210.6); Has 82 Blast hits to 82 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2;
Plants - 75; Viruses - 0; Other Eukaryotes - 5 (source:
NCBI BLink).		 0.64 0.32 -0.31
14 AT4G08490 transposable element gene 0.64 0.3 -0.32
15 AT5G04270 DHHC-type zinc finger family protein -0.63 0.33 -0.31
16 AT4G23330 BEST Arabidopsis thaliana protein match is: eukaryotic
translation initiation factor 3A (TAIR:AT4G11420.1); Has 63
Blast hits to 55 proteins in 14 species: Archae - 0;
Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 62; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.63 0.3 -0.33
17 AT3G30843 transposable element gene -0.62 0.34 -0.31
18 AT2G14040 transposable element gene 0.62 0.32 -0.31
19 AT5G23270 sugar transporter 11 SUGAR TRANSPORTER 11, sugar
transporter 11		 -0.61 0.3 -0.3
20 AT1G28030 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.61 0.32 -0.33
21 AT1G63740 Disease resistance protein (TIR-NBS-LRR class) family 0.6 0.32 -0.31
22 AT5G07890 myosin heavy chain-related 0.6 0.34 -0.3
23 AT5G64710 Putative endonuclease or glycosyl hydrolase -0.6 0.34 -0.31
24 AT2G15700 transposable element gene 0.6 0.3 -0.32
25 AT5G25500 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.6 0.33 -0.34
26 AT1G30480 D111/G-patch domain-containing protein DNA-DAMAGE-REPAIR/TOLERATION
PROTEIN 111		 -0.6 0.32 -0.3
27 AT4G35335 Nucleotide-sugar transporter family protein -0.59 0.33 -0.3
28 ATMG00010 hypothetical protein ORF153A -0.59 0.31 -0.31
29 AT5G59040 copper transporter 3 copper transporter 3 0.58 0.29 -0.35
30 AT4G19910 Toll-Interleukin-Resistance (TIR) domain family protein 0.58 0.31 -0.3
31 AT5G49110 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; EXPRESSED IN:
cultured cell; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.58 0.3 -0.33
32 AT1G41900 transposable element gene 0.58 0.32 -0.32
33 AT4G05340 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.58 0.31 -0.3
34 AT5G42955 Protein of unknown function (DUF784) 0.58 0.29 -0.3
35 AT4G34400 AP2/B3-like transcriptional factor family protein 0.58 0.33 -0.33
36 AT2G15360 BEST Arabidopsis thaliana protein match is:
fucosyltransferase 4 (TAIR:AT2G15390.2); Has 38 Blast hits
to 35 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.58 0.31 -0.31
37 AT5G38870 transposable element gene 0.57 0.3 -0.32
38 AT1G15190 Fasciclin-like arabinogalactan family protein 0.57 0.31 -0.31
39 AT2G22320 unknown protein; Has 7 Blast hits to 7 proteins in 4
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.57 0.32 -0.32
40 AT5G49410 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G73940.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.57 0.28 -0.34
41 AT3G60790 F-box family protein 0.57 0.3 -0.31
42 AT4G18395 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.57 0.29 -0.32
43 AT5G65070 K-box region and MADS-box transcription factor family
protein 		AGAMOUS-like 69, FCL4, MADS
AFFECTING FLOWERING 4		 -0.57 0.32 -0.31
44 AT3G46750 unknown protein; Has 2631 Blast hits to 1984 proteins in
271 species: Archae - 6; Bacteria - 163; Metazoa - 1232;
Fungi - 253; Plants - 141; Viruses - 8; Other Eukaryotes -
828 (source: NCBI BLink).		 -0.57 0.3 -0.34
45 AT3G18970 mitochondrial editing factor 20 mitochondrial editing factor 20 -0.56 0.3 -0.31
46 AT1G15840 unknown protein; Has 111484 Blast hits to 29940 proteins in
1985 species: Archae - 153; Bacteria - 40635; Metazoa -
31564; Fungi - 6444; Plants - 10232; Viruses - 1710; Other
Eukaryotes - 20746 (source: NCBI BLink).		 -0.56 0.32 -0.32
47 AT2G47120 NAD(P)-binding Rossmann-fold superfamily protein 0.56 0.34 -0.31
48 AT4G39420 unknown protein; Has 46 Blast hits to 40 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 44; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.56 0.31 -0.31
49 AT5G02730 CAP (Cysteine-rich secretory proteins, Antigen 5, and
Pathogenesis-related 1 protein) superfamily protein		 -0.56 0.31 -0.3
50 AT3G56440 homolog of yeast autophagy 18 (ATG18) D homolog of yeast autophagy 18
(ATG18) D, homolog of yeast
autophagy 18 (ATG18) D		 0.56 0.34 -0.32
51 AT1G35030 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G34910.1); Has 7 Blast
hits to 7 proteins in 1 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.56 0.31 -0.31
52 AT1G50090 D-aminoacid aminotransferase-like PLP-dependent enzymes
superfamily protein		 -0.55 0.3 -0.31
53 AT5G61470 C2H2-like zinc finger protein -0.55 0.29 -0.32
54 AT4G22680 myb domain protein 85 myb domain protein 85, myb domain
protein 85		 0.55 0.29 -0.3
55 AT1G17545 Protein phosphatase 2C family protein 0.55 0.29 -0.33
56 AT4G04080 ISCU-like 3 ISCU-LIKE 3, ISCU-like 3 0.55 0.32 -0.32
57 AT5G49120 Protein of unknown function (DUF581) 0.55 0.34 -0.31
58 AT1G54923 transposable element gene -0.55 0.31 -0.31
59 AT4G19185 nodulin MtN21 /EamA-like transporter family protein -0.55 0.32 -0.34
60 AT5G62400 unknown protein; Has 7 Blast hits to 7 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.55 0.34 -0.34
61 AT3G43680 transposable element gene -0.55 0.33 -0.32
62 AT1G34530 transposable element gene 0.54 0.32 -0.29
63 AT1G28630 unknown protein; Has 647 Blast hits to 524 proteins in 85
species: Archae - 0; Bacteria - 6; Metazoa - 100; Fungi -
44; Plants - 83; Viruses - 0; Other Eukaryotes - 414
(source: NCBI BLink).		 0.54 0.33 -0.31
64 AT5G61620 myb-like transcription factor family protein -0.54 0.33 -0.32
65 AT5G12260 BEST Arabidopsis thaliana protein match is:
glycosyltransferase family protein 2 (TAIR:AT5G60700.1);
Has 1807 Blast hits to 1807 proteins in 277 species: Archae
- 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants -
385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI
BLink).		 -0.54 0.32 -0.31
66 AT1G28590 GDSL-like Lipase/Acylhydrolase superfamily protein 0.54 0.3 -0.31
67 AT2G15510 transposable element gene -0.54 0.32 -0.34
68 AT2G20550 HSP40/DnaJ peptide-binding protein -0.54 0.3 -0.32
69 AT4G04490 cysteine-rich RLK (RECEPTOR-like protein kinase) 36 cysteine-rich RLK (RECEPTOR-like
protein kinase) 36		 0.53 0.3 -0.32
70 AT2G06950 transposable element gene -0.53 0.31 -0.34
71 AT1G22130 AGAMOUS-like 104 AGAMOUS-like 104 -0.53 0.32 -0.33
72 AT5G65800 ACC synthase 5 ACC synthase 5, ATACS5,
CYTOKININ-INSENSITIVE 5, ETHYLENE
OVERPRODUCER 2		 -0.53 0.32 -0.32
73 AT5G01690 cation/H+ exchanger 27 ARABIDOPSIS THALIANA
CATION/HYDROGEN EXCHANGER 27,
cation/H+ exchanger 27		 -0.52 0.32 -0.33
74 AT1G09270 importin alpha isoform 4 importin alpha isoform 4 -0.52 0.32 -0.35
75 AT2G28830 PLANT U-BOX 12 AtPUB12, PLANT U-BOX 12 -0.52 0.31 -0.33
76 AT1G16150 wall associated kinase-like 4 wall associated kinase-like 4 -0.52 0.32 -0.31
77 AT4G15590 transposable element gene -0.52 0.33 -0.34
78 AT1G12120 Plant protein of unknown function (DUF863) -0.52 0.33 -0.33
79 AT2G46730 pseudogene, similar to 68 kDa protein, blastp match of 68%
identity and 4.7e-17 P-value to
GP|7271113|emb|CAB81547.1||AJ276420 68 kDa protein {Cicer
arietinum}		 0.52 0.28 -0.32
80 AT1G66210 Subtilisin-like serine endopeptidase family protein -0.52 0.33 -0.33
81 AT5G48390 Tetratricopeptide repeat (TPR)-like superfamily protein ATZIP4 -0.52 0.31 -0.33
82 AT5G27160 transposable element gene -0.52 0.33 -0.3
83 AT2G07320 transposable element gene -0.52 0.32 -0.32
84 AT1G23450 Tetratricopeptide repeat (TPR)-like superfamily protein -0.51 0.32 -0.33
85 AT5G36080 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G32904.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.51 0.34 -0.31
86 AT5G47310 PPPDE putative thiol peptidase family protein -0.51 0.34 -0.3
87 ATMG00470 hypothetical protein ORF122A 0.51 0.29 -0.34
88 AT1G37160 transposable element gene -0.51 0.29 -0.3
89 AT1G61920 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: sperm cell, male
gametophyte, pollen tube; EXPRESSED DURING: M germinated
pollen stage; Has 3 Blast hits to 3 proteins in 1 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.51 0.31 -0.34
90 AT2G06310 transposable element gene 0.51 0.32 -0.31
91 AT3G42190 transposable element gene 0.51 0.31 -0.31
92 AT2G04670 transposable element gene 0.51 0.31 -0.29
93 AT1G17800 early nodulin-like protein 22 AtENODL22, early nodulin-like
protein 22		 0.5 0.31 -0.34
94 AT2G11270 citrate synthase-related 0.5 0.33 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
95 C0020 1-Aminocyclopropane-1-carboxylic acid - 1-Aminocyclopropane-1-carboxylate jasmonoyl-amino acid conjugates biosynthesis I,
ethylene biosynthesis I (plants),
methionine salvage pathway 		-0.56 0.46 -0.44 C0020