AT3G42290 : -
Query Information
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AGICode AT3G42290
Description transposable element gene
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G42290 transposable element gene 1 0.31 -0.33
2 AT1G33320 Pyridoxal phosphate (PLP)-dependent transferases
superfamily protein		 -0.78 0.31 -0.31
3 AT3G05260 NAD(P)-binding Rossmann-fold superfamily protein 0.77 0.31 -0.31
4 AT1G18340 basal transcription factor complex subunit-related -0.76 0.29 -0.34
5 AT3G42850 Mevalonate/galactokinase family protein -0.75 0.31 -0.31
6 AT3G19880 F-box and associated interaction domains-containing protein -0.75 0.31 -0.3
7 AT2G33240 myosin XI D MYOSIN XI D, myosin XI D 0.74 0.32 -0.33
8 AT3G26140 Cellulase (glycosyl hydrolase family 5) protein -0.74 0.34 -0.33
9 AT5G34900 transposable element gene -0.74 0.32 -0.32
10 AT1G61750 Receptor-like protein kinase-related family protein 0.73 0.33 -0.29
11 AT2G45200 golgi snare 12 ATGOS12, golgi snare 12 0.73 0.31 -0.3
12 AT5G65450 ubiquitin-specific protease 17 ubiquitin-specific protease 17 -0.73 0.33 -0.32
13 AT5G17140 Cysteine proteinases superfamily protein -0.73 0.31 -0.32
14 AT5G18160 F-box and associated interaction domains-containing protein 0.73 0.29 -0.31
15 AT3G24280 small acidic protein 2 small acidic protein 2 -0.73 0.33 -0.33
16 AT3G06230 MAP kinase kinase 8 MAP kinase kinase 8, MAP kinase
kinase 8		 -0.72 0.33 -0.3
17 AT1G78470 BEST Arabidopsis thaliana protein match is: F-box family
protein (TAIR:AT1G67390.1); Has 40 Blast hits to 40
proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.72 0.33 -0.31
18 AT3G29690 HXXXD-type acyl-transferase family protein 0.71 0.31 -0.31
19 AT1G35380 transposable element gene 0.71 0.31 -0.32
20 AT1G33410 SUPPRESSOR OF AUXIN RESISTANCE1 ARABIDOPSIS NUCLEOPORIN 160,
NUCLEOPORIN 160, SUPPRESSOR OF
AUXIN RESISTANCE1		 -0.7 0.32 -0.3
21 AT4G13650 Pentatricopeptide repeat (PPR) superfamily protein -0.7 0.32 -0.33
22 AT1G48095 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G36960.1); Has 82 Blast hits
to 82 proteins in 3 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.7 0.32 -0.32
23 AT5G39620 RAB GTPase homolog G1 RAB GTPase homolog G1, RAB GTPase
homolog G1		 -0.7 0.33 -0.28
24 AT3G13662 Disease resistance-responsive (dirigent-like protein)
family protein		 0.7 0.31 -0.31
25 AT3G46860 Serine protease inhibitor, potato inhibitor I-type family
protein		 -0.7 0.34 -0.31
26 AT2G05870 transposable element gene -0.69 0.33 -0.34
27 AT5G49260 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.69 0.31 -0.31
28 AT4G29580 Cytidine/deoxycytidylate deaminase family protein -0.69 0.3 -0.32
29 AT2G10010 transposable element gene -0.69 0.31 -0.31
30 AT3G15930 Pentatricopeptide repeat (PPR) superfamily protein -0.69 0.28 -0.31
31 AT1G31260 zinc transporter 10 precursor zinc transporter 10 precursor 0.68 0.32 -0.34
32 AT2G07070 transposable element gene -0.68 0.33 -0.31
33 AT2G25500 Inosine triphosphate pyrophosphatase family protein 0.68 0.32 -0.29
34 AT3G13170 Spo11/DNA topoisomerase VI, subunit A protein ATSPO11-1 -0.68 0.33 -0.32
35 AT5G63920 topoisomerase 3alpha AtTOP3alpha, topoisomerase 3alpha -0.68 0.33 -0.31
36 AT2G07000 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.68 0.3 -0.31
37 AT5G27190 transposable element gene -0.68 0.33 -0.31
38 AT4G30300 non-intrinsic ABC protein 15 ATP-binding cassette E3,
ARABIDOPSIS THALIANA NON-INTRINSIC
ABC PROTEIN 15, non-intrinsic ABC
protein 15		 -0.68 0.34 -0.31
39 AT3G10890 Glycosyl hydrolase superfamily protein 0.67 0.32 -0.31
40 AT4G11590 F-box associated ubiquitination effector family protein -0.67 0.29 -0.3
41 AT4G11970 YTH family protein -0.67 0.29 -0.3
42 AT2G37160 Transducin/WD40 repeat-like superfamily protein -0.67 0.33 -0.3
43 AT1G68240 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.67 0.33 -0.3
44 AT4G07840 transposable element gene -0.67 0.33 -0.3
45 AT4G26890 mitogen-activated protein kinase kinase kinase 16 mitogen-activated protein kinase
kinase kinase 16		 0.67 0.32 -0.34
46 AT5G51480 SKU5 similar 2 SKU5 similar 2 0.67 0.32 -0.29
47 AT1G43140 Cullin family protein -0.67 0.31 -0.31
48 AT2G28070 ABC-2 type transporter family protein ATP-binding cassette G3 -0.66 0.31 -0.32
49 AT2G46300 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 0.66 0.32 -0.32
50 AT2G05000 transposable element gene -0.66 0.3 -0.3
51 AT4G05500 pseudogene, F-box protein family, AtFBL9/AtFBL23, contains
similarity to N7 protein GI:3273101 from (Medicago
truncatula); blastp match of 39% identity and 1.6e-34
P-value to GP|3273101|emb|CAA76808.1||Y17613 N7 protein
{Medicago truncatula}		 -0.66 0.31 -0.33
52 AT1G48980 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.66 0.3 -0.31
53 AT3G09880 Protein phosphatase 2A regulatory B subunit family protein ATB' BETA -0.66 0.32 -0.31
54 AT2G14830 Regulator of Vps4 activity in the MVB pathway protein 0.66 0.33 -0.33
55 AT4G32950 Protein phosphatase 2C family protein 0.66 0.34 -0.3
56 AT5G48390 Tetratricopeptide repeat (TPR)-like superfamily protein ATZIP4 0.66 0.33 -0.29
57 AT5G14620 domains rearranged methyltransferase 2 DMT7, domains rearranged
methyltransferase 2		 -0.66 0.3 -0.3
58 AT4G36370 unknown protein; Has 3 Blast hits to 3 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.66 0.34 -0.31
59 AT2G15700 transposable element gene -0.66 0.32 -0.31
60 AT1G67690 Zincin-like metalloproteases family protein -0.66 0.31 -0.3
61 AT3G30570 transposable element gene -0.66 0.33 -0.31
62 AT5G40940 putative fasciclin-like arabinogalactan protein 20 putative fasciclin-like
arabinogalactan protein 20		 -0.65 0.32 -0.33
63 AT5G14990 BEST Arabidopsis thaliana protein match is: myosin heavy
chain-related (TAIR:AT2G34730.1); Has 8284 Blast hits to
6001 proteins in 578 species: Archae - 107; Bacteria - 678;
Metazoa - 3983; Fungi - 607; Plants - 315; Viruses - 16;
Other Eukaryotes - 2578 (source: NCBI BLink).		 0.65 0.32 -0.28
64 AT3G03660 WUSCHEL related homeobox 11 WUSCHEL related homeobox 11 0.65 0.31 -0.3
65 AT4G23320 cysteine-rich RLK (RECEPTOR-like protein kinase) 24 cysteine-rich RLK (RECEPTOR-like
protein kinase) 24		 0.65 0.32 -0.31
66 AT3G26150 cytochrome P450, family 71, subfamily B, polypeptide 16 cytochrome P450, family 71,
subfamily B, polypeptide 16		 -0.65 0.32 -0.32
67 AT2G16040 hAT dimerisation domain-containing protein /
transposase-related		 0.65 0.3 -0.3
68 AT5G35140 transposable element gene 0.65 0.32 -0.31
69 AT4G21500 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G05018.1); Has 20 Blast
hits to 20 proteins in 8 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 17; Viruses - 0; Other
Eukaryotes - 3 (source: NCBI BLink).		 0.65 0.3 -0.31
70 AT3G06250 FAR1-related sequence 7 FAR1-related sequence 7 -0.65 0.33 -0.29
71 AT1G30350 Pectin lyase-like superfamily protein -0.65 0.3 -0.3
72 AT3G56520 NAC (No Apical Meristem) domain transcriptional regulator
superfamily protein		 0.65 0.3 -0.32
73 AT3G19510 Homeodomain-like protein with RING/FYVE/PHD-type zinc
finger domain		 HAT3.1 -0.65 0.31 -0.34
74 AT3G62890 Pentatricopeptide repeat (PPR) superfamily protein 0.65 0.32 -0.3
75 AT1G14200 RING/U-box superfamily protein 0.65 0.3 -0.33
76 AT3G29640 transposable element gene 0.65 0.32 -0.34
77 AT2G12880 Zinc knuckle (CCHC-type) family protein 0.64 0.33 -0.31
78 AT1G57780 heavy-metal-associated domain-containing protein 0.64 0.32 -0.34
79 AT1G11060 WAPL (Wings apart-like protein regulation of
heterochromatin) protein		 -0.64 0.29 -0.29
80 AT3G04810 NIMA-related kinase 2 NIMA-related kinase 2,
NIMA-related kinase 2		 -0.64 0.33 -0.32
81 AT4G08970 transposable element gene 0.64 0.31 -0.32
82 AT3G16890 pentatricopeptide (PPR) domain protein 40 pentatricopeptide (PPR) domain
protein 40		 -0.64 0.33 -0.32
83 AT4G10880 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G10870.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.64 0.32 -0.29
84 AT3G04280 response regulator 22 response regulator 22, response
regulator 22		 0.64 0.32 -0.31
85 AT5G37620 Cysteine/Histidine-rich C1 domain family protein -0.64 0.31 -0.29
86 AT4G23950 Galactose-binding protein -0.64 0.32 -0.33
87 AT2G02980 Pentatricopeptide repeat (PPR) superfamily protein ORGANELLE TRANSCRIPT PROCESSING 85 -0.64 0.33 -0.31
88 AT5G57320 villin, putative villin 5 -0.64 0.31 -0.3
89 AT1G74740 calcium-dependent protein kinase 30 ATCPK30, CALCIUM-DEPENDENT PROTEIN
KINASE 1A, calcium-dependent
protein kinase 30		 0.64 0.31 -0.33
90 AT2G29410 metal tolerance protein B1 ATMTPB1, metal tolerance protein
B1		 0.64 0.3 -0.32
91 AT1G54955 transposable element gene 0.63 0.3 -0.32
92 AT1G12620 Pentatricopeptide repeat (PPR) superfamily protein -0.63 0.31 -0.33
93 AT3G17280 F-box and associated interaction domains-containing protein -0.63 0.34 -0.31
94 AT5G38340 Disease resistance protein (TIR-NBS-LRR class) family -0.63 0.33 -0.33
95 AT3G29796 unknown protein; Has 28 Blast hits to 20 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 18; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 9 (source: NCBI
BLink).		 -0.63 0.31 -0.31
96 AT5G02690 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 11 plant structures;
EXPRESSED DURING: 9 growth stages; Has 2 Blast hits to 2
proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.63 0.3 -0.31
97 AT1G23910 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.63 0.32 -0.32
98 AT3G05090 Transducin/WD40 repeat-like superfamily protein LATERAL ROOT STIMULATOR 1 -0.63 0.31 -0.3
99 AT1G69190 Dihydropterin pyrophosphokinase / Dihydropteroate synthase -0.63 0.34 -0.31
100 AT2G38420 Pentatricopeptide repeat (PPR) superfamily protein 0.63 0.32 -0.32
101 AT2G26620 Pectin lyase-like superfamily protein 0.63 0.31 -0.29
102 AT5G25290 F-box family protein with a domain of unknown function
(DUF295)		 -0.63 0.31 -0.32
103 AT4G13060 F-box associated ubiquitination effector family protein -0.63 0.32 -0.32
104 AT5G60910 AGAMOUS-like 8 AGAMOUS-like 8, FRUITFULL 0.63 0.33 -0.3
105 AT3G43120 SAUR-like auxin-responsive protein family -0.63 0.31 -0.32
106 AT2G06640 transposable element gene 0.63 0.29 -0.31
107 AT4G20235 cytochrome P450, family 71, subfamily A, polypeptide 28 cytochrome P450, family 71,
subfamily A, polypeptide 28		 -0.63 0.32 -0.31
108 AT5G37640 ubiquitin 9 ubiquitin 9 0.62 0.32 -0.28
109 AT1G18280 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.62 0.31 -0.3
110 AT1G26710 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G26720.1); Has 9 Blast hits to
9 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 9; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.62 0.3 -0.32
111 AT3G42390 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.62 0.28 -0.33
112 AT4G02300 Plant invertase/pectin methylesterase inhibitor superfamily -0.62 0.33 -0.31
113 AT2G36720 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc
finger domain		 -0.62 0.33 -0.32
114 AT5G24230 Lipase class 3-related protein -0.62 0.3 -0.31
115 AT3G42100 transposable element gene -0.62 0.33 -0.32
116 AT4G10550 Subtilase family protein -0.62 0.32 -0.31
117 AT5G19380 CRT (chloroquine-resistance transporter)-like transporter 1 CRT (chloroquine-resistance
transporter)-like transporter 1		 -0.62 0.32 -0.31
118 AT4G38390 root hair specific 17 root hair specific 17 -0.62 0.32 -0.31
119 AT4G15120 VQ motif-containing protein 0.62 0.32 -0.32
120 AT2G34400 Pentatricopeptide repeat (PPR-like) superfamily protein -0.62 0.31 -0.36
121 AT5G35150 transposable element gene -0.62 0.3 -0.31
122 AT5G48270 Plant protein of unknown function (DUF868) -0.62 0.32 -0.3
123 AT1G45545 Plant protein of unknown function (DUF827) -0.62 0.32 -0.31
124 AT2G14630 transposable element gene -0.61 0.29 -0.33
125 AT5G09950 Tetratricopeptide repeat (TPR)-like superfamily protein 0.61 0.33 -0.32
126 AT4G04480 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN:
flower, pollen tube; EXPRESSED DURING: petal
differentiation and expansion stage; BEST Arabidopsis
thaliana protein match is: F-box family protein with a
domain of unknown function (DUF295) (TAIR:AT4G22030.1); Has
78 Blast hits to 78 proteins in 10 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 78; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.61 0.33 -0.3
127 AT5G18910 Protein kinase superfamily protein -0.61 0.32 -0.29
128 AT4G15200 formin 3 formin 3, formin 3 -0.61 0.3 -0.29
129 AT3G04200 RmlC-like cupins superfamily protein -0.61 0.33 -0.32
130 AT2G07630 transposable element gene -0.61 0.33 -0.31
131 AT4G35820 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.61 0.31 -0.3
132 AT1G43680 BEST Arabidopsis thaliana protein match is: nucleic acid
binding;zinc ion binding (TAIR:AT5G36228.1); Has 59 Blast
hits to 57 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 59; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.61 0.31 -0.32
133 AT4G11200 transposable element gene 0.61 0.32 -0.29
134 AT2G19510 LOB domain-containing protein 8 LOB domain-containing protein 8 0.61 0.32 -0.31
135 AT5G60740 ABC transporter family protein ATP-binding cassette G28 0.61 0.34 -0.31
136 AT1G28560 snRNA activating complex family protein SHOOT REDIFFERENTIATION DEFECTIVE
2		 -0.61 0.32 -0.29
137 AT2G28680 RmlC-like cupins superfamily protein -0.61 0.31 -0.31
138 AT5G47280 ADR1-like 3 ADR1-like 3 -0.61 0.31 -0.32
139 AT1G08340 Rho GTPase activating protein with PAK-box/P21-Rho-binding
domain		 0.61 0.31 -0.31
140 AT2G26150 heat shock transcription factor A2 heat shock transcription factor
A2, heat shock transcription
factor A2		 0.61 0.34 -0.31
141 AT3G22360 alternative oxidase 1B alternative oxidase 1B 0.61 0.3 -0.31
142 AT1G20750 RAD3-like DNA-binding helicase protein 0.61 0.31 -0.32
143 AT3G19870 unknown protein; Has 84 Blast hits to 64 proteins in 35
species: Archae - 0; Bacteria - 0; Metazoa - 31; Fungi - 0;
Plants - 24; Viruses - 0; Other Eukaryotes - 29 (source:
NCBI BLink).		 -0.61 0.31 -0.31
144 AT1G25270 nodulin MtN21 /EamA-like transporter family protein -0.61 0.31 -0.34
145 AT2G44480 beta glucosidase 17 beta glucosidase 17 0.6 0.31 -0.32
146 AT1G54140 TATA binding protein associated factor 21kDa subunit TBP-ASSOCIATED FACTOR 9, TATA
binding protein associated factor
21kDa subunit		 0.6 0.31 -0.31
147 AT1G56610 Protein with RNI-like/FBD-like domains 0.6 0.33 -0.31
148 AT4G08430 Ulp1 protease family protein 0.6 0.33 -0.31
149 AT4G22430 F-box family protein 0.6 0.33 -0.32
150 AT2G37720 TRICHOME BIREFRINGENCE-LIKE 15 TRICHOME BIREFRINGENCE-LIKE 15 0.6 0.32 -0.31
151 AT2G17660 RPM1-interacting protein 4 (RIN4) family protein 0.6 0.34 -0.32
152 AT1G08135 cation/H+ exchanger 6B ATCHX6B, cation/H+ exchanger 6B 0.59 0.32 -0.32
153 AT5G19480 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G12230.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.59 0.32 -0.32
154 AT5G24110 WRKY DNA-binding protein 30 ARABIDOPSIS THALIANA WRKY
DNA-BINDING PROTEIN 30, WRKY
DNA-binding protein 30		 0.59 0.32 -0.3
155 AT4G11730 Cation transporter/ E1-E2 ATPase family protein 0.59 0.35 -0.3
156 AT1G36910 transposable element gene 0.59 0.3 -0.34
157 AT3G50120 Plant protein of unknown function (DUF247) 0.58 0.32 -0.33
158 AT2G18720 Translation elongation factor EF1A/initiation factor
IF2gamma family protein		 0.58 0.34 -0.31
159 AT1G35500 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G35614.1); Has 8 Blast hits to
8 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 8; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.58 0.33 -0.32
160 AT2G34440 AGAMOUS-like 29 AGAMOUS-like 29 0.58 0.32 -0.31
161 AT1G74590 glutathione S-transferase TAU 10 GLUTATHIONE S-TRANSFERASE TAU 10,
glutathione S-transferase TAU 10		 0.58 0.36 -0.3
162 AT5G19710 BEST Arabidopsis thaliana protein match is: HPT
phosphotransmitter 4 (TAIR:AT3G16360.2); Has 1807 Blast
hits to 1807 proteins in 277 species: Archae - 0; Bacteria
- 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.58 0.32 -0.32
163 AT1G26970 Protein kinase superfamily protein 0.58 0.31 -0.33
164 AT5G66430 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.58 0.32 -0.32