AT3G42300 : -
Query Information
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AGICode AT3G42300
Description transposable element gene
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G42300 transposable element gene 1 0.32 -0.33
2 AT2G36740 sequence-specific DNA binding transcription factors;DNA
binding;DNA binding		 ATSWC2, SWC2 0.67 0.3 -0.32
3 AT2G44420 protein N-terminal asparagine amidohydrolase family protein 0.59 0.34 -0.31
4 AT3G11760 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G04860.1); Has 84 Blast hits to 73 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.59 0.32 -0.31
5 AT5G58510 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 14 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G55060.2); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.58 0.31 -0.31
6 AT2G47830 Cation efflux family protein 0.57 0.3 -0.32
7 AT4G32360 Pyridine nucleotide-disulphide oxidoreductase family
protein		 0.57 0.31 -0.31
8 AT1G29650 transposable element gene 0.55 0.3 -0.33
9 AT2G04063 glycine-rich protein -0.55 0.33 -0.3
10 AT5G11910 alpha/beta-Hydrolases superfamily protein 0.54 0.31 -0.32
11 AT4G21090 MITOCHONDRIAL FERREDOXIN 2 ARABIDOPSIS MITOCHONDRIAL
FERREDOXIN 2, MITOCHONDRIAL
FERREDOXIN 2		 0.54 0.32 -0.3
12 AT2G40530 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: leaf apex, inflorescence
meristem, petal, flower; EXPRESSED DURING: 4 anthesis,
petal differentiation and expansion stage; Has 5 Blast hits
to 5 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.54 0.31 -0.31
13 AT1G44990 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; Has 0 Blast hits to 0 proteins in 0
species (source: NCBI BLink).		 0.54 0.29 -0.3
14 AT1G47220 Cyclin A3;3 Cyclin A3;3 0.54 0.34 -0.32
15 AT2G03220 fucosyltransferase 1 ARABIDOPSIS THALIANA
FUCOSYLTRANSFERASE 1, ARABIDOPSIS
THALIANA FUCOSYLTRANSFERASE 1,
fucosyltransferase 1, MURUS 2		 -0.53 0.32 -0.3
16 AT5G02680 LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: methionine--tRNA
ligase, putative / methionyl-tRNA synthetase, putative /
MetRS, putative (TAIR:AT4G13780.1); Has 252 Blast hits to
252 proteins in 89 species: Archae - 0; Bacteria - 71;
Metazoa - 93; Fungi - 0; Plants - 74; Viruses - 0; Other
Eukaryotes - 14 (source: NCBI BLink).		 0.53 0.32 -0.31
17 AT2G06310 transposable element gene 0.53 0.33 -0.33
18 AT5G07230 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.53 0.31 -0.33
19 AT1G78510 solanesyl diphosphate synthase 1 solanesyl diphosphate synthase 1 0.52 0.32 -0.32
20 AT1G78390 nine-cis-epoxycarotenoid dioxygenase 9 NINE-CIS-EPOXYCAROTENOID
DIOXYGENASE 9,
nine-cis-epoxycarotenoid
dioxygenase 9		 -0.52 0.33 -0.3
21 AT2G47280 Pectin lyase-like superfamily protein 0.51 0.31 -0.33
22 AT2G12480 serine carboxypeptidase-like 43 serine carboxypeptidase-like 43 0.51 0.33 -0.32
23 AT1G18310 glycosyl hydrolase family 81 protein 0.51 0.32 -0.32
24 AT3G06260 galacturonosyltransferase-like 4 galacturonosyltransferase-like 4,
galactinol synthase 9		 0.51 0.3 -0.32
25 AT5G29090 transposable element gene 0.5 0.33 -0.32
26 AT5G42955 Protein of unknown function (DUF784) 0.5 0.3 -0.31
27 AT4G02195 syntaxin of plants 42 ATSYP42, ATTLG2B, syntaxin of
plants 42, TLG2B		 0.5 0.32 -0.33
28 AT1G49260 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 14 growth stages; BEST Arabidopsis thaliana protein
match is: mechanosensitive channel of small
conductance-like 5 (TAIR:AT3G14810.1); Has 140 Blast hits
to 140 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 140; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.49 0.32 -0.32
29 AT2G29250 Concanavalin A-like lectin protein kinase family protein 0.49 0.31 -0.3
30 AT5G63950 chromatin remodeling 24 chromatin remodeling 24 -0.48 0.3 -0.31
31 AT2G05530 Glycine-rich protein family -0.48 0.32 -0.3
32 AT5G58520 Protein kinase superfamily protein -0.48 0.31 -0.32
33 AT3G45610 Dof-type zinc finger DNA-binding family protein DOF transcription factor 6 -0.47 0.35 -0.31
34 AT2G41650 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 3 Blast hits to 3 proteins in
1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.47 0.3 -0.31
35 AT3G25020 receptor like protein 42 receptor like protein 42, receptor
like protein 42		 0.47 0.32 -0.32
36 AT2G11010 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: mitochondrion; BEST
Arabidopsis thaliana protein match is: myosin heavy
chain-related (TAIR:AT5G32590.1); Has 404 Blast hits to 390
proteins in 105 species: Archae - 10; Bacteria - 61;
Metazoa - 184; Fungi - 25; Plants - 79; Viruses - 0; Other
Eukaryotes - 45 (source: NCBI BLink).		 0.47 0.31 -0.29
37 AT5G52480 RNI-like superfamily protein -0.47 0.32 -0.3
38 AT2G05550 transposable element gene 0.47 0.33 -0.32
39 AT4G18180 Pectin lyase-like superfamily protein -0.47 0.32 -0.32
40 AT4G13880 receptor like protein 48 receptor like protein 48, receptor
like protein 48		 0.46 0.29 -0.31
41 AT3G42480 transposable element gene -0.46 0.32 -0.32
42 AT5G49190 sucrose synthase 2 ATSUS2, SUCROSE SYNTHASE FROM
ARABIDOPSIS, sucrose synthase 2		 -0.45 0.3 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
43 C0012 n-Eicosanoic acid - Arachidate fatty acid activation,
fatty acid ω-oxidation,
sporopollenin precursor biosynthesis,
acyl-ACP thioesterase pathway,
ceramide degradation,
fatty acid α-oxidation,
fatty acid ω-oxidation,
phospholipases,
triacylglycerol degradation 		-0.73 0.42 -0.46 C0012
44 C0195 Phenylpyruvic acid - Phenylpyruvate phenylalanine degradation III 0.69 0.45 -0.47 C0195
45 C0139 Linoleic acid n-cis,cis-9,12-Octadecadienoic acid Linoleate poly-hydroxy fatty acids biosynthesis,
traumatin and (Z)-3-hexen-1-yl acetate biosynthesis,
crepenynic acid biosynthesis 		-0.51 0.31 -0.29 C0139