AT3G42340 : -
Query Information
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AGICode AT3G42340
Description transposable element gene
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G42340 transposable element gene 1 0.31 -0.31
2 AT3G28280 BEST Arabidopsis thaliana protein match is: F-box family
protein-related (TAIR:AT3G28330.1); Has 103 Blast hits to
100 proteins in 3 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 103; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.69 0.33 -0.33
3 AT2G39060 Nodulin MtN3 family protein AtSWEET9, SWEET9 0.68 0.32 -0.32
4 AT4G03750 transposable element gene -0.68 0.32 -0.3
5 AT1G05550 Protein of unknown function (DUF295) -0.67 0.32 -0.34
6 AT3G28770 Protein of unknown function (DUF1216) 0.67 0.32 -0.29
7 AT4G16920 Disease resistance protein (TIR-NBS-LRR class) family -0.65 0.32 -0.3
8 AT2G47660 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.64 0.31 -0.31
9 AT5G12280 SWAP (Suppressor-of-White-APricot)/surp RNA-binding
domain-containing protein		 0.64 0.33 -0.3
10 AT5G42170 SGNH hydrolase-type esterase superfamily protein -0.63 0.29 -0.29
11 AT5G59660 Leucine-rich repeat protein kinase family protein 0.63 0.33 -0.32
12 AT2G03630 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G74220.1); Has 126 Blast hits
to 126 proteins in 28 species: Archae - 0; Bacteria - 6;
Metazoa - 7; Fungi - 5; Plants - 87; Viruses - 0; Other
Eukaryotes - 21 (source: NCBI BLink).		 0.63 0.3 -0.33
13 AT5G35920 cytochrome P450, family 79, subfamily A, polypeptide 4
pseudogene		 cytochrome P450, family 79,
subfamily A, polypeptide 4
pseudogene		 0.63 0.33 -0.32
14 AT1G50470 F-box associated ubiquitination effector family protein -0.62 0.32 -0.32
15 AT1G48180 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G51670.1); Has 39 Blast hits
to 39 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.61 0.31 -0.33
16 AT5G04210 CCCH-type zinc fingerfamily protein with RNA-binding domain 0.61 0.32 -0.32
17 AT2G14810 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.6 0.32 -0.3
18 AT1G75790 SKU5 similar 18 SKU5 similar 18 -0.6 0.3 -0.3
19 AT5G47850 CRINKLY4 related 4 CRINKLY4 related 4 0.6 0.32 -0.31
20 AT1G35647 transposable element gene 0.6 0.31 -0.32
21 AT2G16835 Aquaporin-like superfamily protein -0.59 0.3 -0.31
22 AT1G28327 unknown protein; Has 52 Blast hits to 52 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 52; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.59 0.33 -0.31
23 AT1G64290 F-box protein-related 0.59 0.32 -0.33
24 AT3G49162 pseudogene of glycoside hydrolase family 28 protein 0.59 0.33 -0.33
25 AT3G60410 Protein of unknown function (DUF1639) 0.59 0.34 -0.3
26 AT5G25410 Protein of Unknown Function (DUF239) -0.59 0.34 -0.32
27 AT1G33920 phloem protein 2-A4 phloem protein 2-A4, phloem
protein 2-A4		 0.59 0.31 -0.3
28 AT1G05740 Eukaryotic protein of unknown function (DUF842) 0.58 0.32 -0.32
29 AT1G77240 AMP-dependent synthetase and ligase family protein 0.58 0.32 -0.32
30 AT4G03770 transposable element gene 0.58 0.33 -0.32
31 AT3G30846 transposable element gene 0.58 0.31 -0.3
32 AT2G37000 TCP family transcription factor 0.57 0.31 -0.31
33 AT1G68270 AMP-dependent synthetase and ligase family protein -0.57 0.31 -0.3
34 AT4G03950 Nucleotide/sugar transporter family protein -0.57 0.33 -0.3
35 AT2G35100 Exostosin family protein ARABINAN DEFICIENT 1 -0.57 0.32 -0.31
36 AT1G75930 extracellular lipase 6 extracellular lipase 6 0.57 0.31 -0.32
37 AT4G23310 cysteine-rich RLK (RECEPTOR-like protein kinase) 23 cysteine-rich RLK (RECEPTOR-like
protein kinase) 23		 0.57 0.32 -0.28
38 AT5G52140 RING/U-box superfamily protein 0.57 0.32 -0.31
39 AT2G45460 SMAD/FHA domain-containing protein -0.57 0.33 -0.3
40 AT3G24360 ATP-dependent caseinolytic (Clp) protease/crotonase family
protein		 0.57 0.32 -0.31
41 AT2G02830 transposable element gene -0.57 0.31 -0.31
42 AT1G09720 Kinase interacting (KIP1-like) family protein -0.57 0.3 -0.31
43 AT5G09340 Ubiquitin family protein 0.56 0.32 -0.32
44 AT4G24980 nodulin MtN21 /EamA-like transporter family protein -0.56 0.32 -0.32
45 AT3G27410 unknown protein; Has 10 Blast hits to 10 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 10; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.56 0.32 -0.31
46 AT1G03890 RmlC-like cupins superfamily protein -0.56 0.31 -0.3
47 AT1G60380 NAC (No Apical Meristem) domain transcriptional regulator
superfamily protein		 0.56 0.33 -0.32
48 AT3G62180 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.56 0.33 -0.31
49 AT1G07160 Protein phosphatase 2C family protein -0.56 0.31 -0.32
50 AT3G24270 pumilio 25 pumilio 25, pumilio 25 0.56 0.31 -0.3
51 AT2G40740 WRKY DNA-binding protein 55 WRKY DNA-BINDING PROTEIN 55, WRKY
DNA-binding protein 55		 -0.56 0.33 -0.29
52 AT4G39756 Galactose oxidase/kelch repeat superfamily protein 0.55 0.32 -0.32
53 AT3G55590 Glucose-1-phosphate adenylyltransferase family protein 0.55 0.3 -0.34
54 AT5G60040 nuclear RNA polymerase C1 nuclear RNA polymerase C1 -0.55 0.32 -0.35
55 AT4G05490 RNI-like superfamily protein 0.55 0.31 -0.34
56 AT5G37970 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.55 0.31 -0.34
57 AT2G39705 ROTUNDIFOLIA like 8 DEVIL 11, ROTUNDIFOLIA like 8 -0.55 0.34 -0.33
58 AT1G43810 unknown protein; Has 6 Blast hits to 6 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.55 0.32 -0.32
59 AT5G53840 F-box/RNI-like/FBD-like domains-containing protein 0.55 0.29 -0.31
60 AT4G07425 transposable element gene -0.55 0.31 -0.33
61 AT4G03690 transposable element gene -0.55 0.32 -0.27
62 AT1G32600 F-box associated ubiquitination effector family protein 0.55 0.29 -0.31
63 AT1G09000 NPK1-related protein kinase 1 NPK1-related protein kinase 1, MAP
KINASE KINASE KINASE 1,
NPK1-related protein kinase 1		 -0.54 0.31 -0.33
64 AT4G13960 F-box/RNI-like superfamily protein 0.54 0.3 -0.3
65 AT2G22750 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.54 0.29 -0.32
66 AT1G49930 BEST Arabidopsis thaliana protein match is: Alanyl-tRNA
synthetase, class IIc (TAIR:AT5G22800.1); Has 21 Blast hits
to 21 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 21; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.54 0.33 -0.31
67 AT4G20420 Tapetum specific protein TAP35/TAP44 0.54 0.32 -0.29
68 AT1G34240 transposable element gene 0.54 0.31 -0.3
69 AT1G16705 p300/CBP acetyltransferase-related protein-related 0.54 0.31 -0.32
70 AT1G61940 tubby like protein 4 tubby like protein 4, tubby like
protein 4		 -0.54 0.3 -0.32
71 AT2G03450 purple acid phosphatase 9 PURPLE ACID PHOSPHATASE 9, purple
acid phosphatase 9		 -0.54 0.32 -0.32
72 AT5G36960 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.53 0.32 -0.32
73 AT1G05450 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.53 0.3 -0.32
74 AT2G07380 transposable element gene -0.53 0.3 -0.31
75 AT4G21323 Subtilase family protein -0.53 0.29 -0.32
76 AT3G30260 AGAMOUS-like 79 AGAMOUS-like 79 0.53 0.3 -0.32
77 AT4G16930 Toll-Interleukin-Resistance (TIR) domain-containing protein -0.53 0.33 -0.32
78 AT1G26320 Zinc-binding dehydrogenase family protein 0.53 0.3 -0.33
79 AT2G21040 Calcium-dependent lipid-binding (CaLB domain) family
protein		 0.52 0.34 -0.34
80 AT2G20030 RING/U-box superfamily protein -0.52 0.31 -0.33
81 AT3G62350 BEST Arabidopsis thaliana protein match is: F-box family
protein (TAIR:AT1G71320.1); Has 136 Blast hits to 136
proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 134; Viruses - 0; Other Eukaryotes -
2 (source: NCBI BLink).		 0.52 0.32 -0.33
82 AT4G26930 myb domain protein 97 myb domain protein 97, myb domain
protein 97		 0.52 0.32 -0.33
83 AT1G50960 gibberellin 2-oxidase 7 ARABIDOPSIS THALIANA GIBBERELLIN
2-OXIDASE 7, gibberellin 2-oxidase
7		 0.52 0.32 -0.3
84 AT5G51320 transposable element gene 0.52 0.31 -0.32
85 AT2G02640 Cysteine/Histidine-rich C1 domain family protein 0.52 0.31 -0.31
86 AT3G30220 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G43150.1); Has 30 Blast hits
to 30 proteins in 3 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.52 0.3 -0.31
87 AT4G24860 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.52 0.31 -0.33
88 AT3G26040 HXXXD-type acyl-transferase family protein -0.52 0.31 -0.31
89 AT3G09140 Protein of unknown function (DUF674) 0.52 0.32 -0.31
90 AT1G80550 Pentatricopeptide repeat (PPR) superfamily protein -0.52 0.32 -0.31
91 AT5G62420 NAD(P)-linked oxidoreductase superfamily protein 0.52 0.36 -0.32
92 AT3G57270 beta-1,3-glucanase 1 beta-1,3-glucanase 1 0.52 0.32 -0.31
93 AT3G20030 F-box and associated interaction domains-containing protein 0.52 0.32 -0.31
94 AT2G44180 methionine aminopeptidase 2A methionine aminopeptidase 2A 0.51 0.32 -0.3
95 AT5G54700 Ankyrin repeat family protein 0.51 0.3 -0.31
96 AT1G08100 nitrate transporter 2.2 ACH2, NITRATE TRANSPORTER 2.2,
nitrate transporter 2.2, NRT2;2AT		 -0.51 0.3 -0.3
97 AT3G57370 Cyclin family protein 0.51 0.32 -0.3
98 AT3G55870 ADC synthase superfamily protein 0.51 0.31 -0.29
99 AT1G49015 DPP6 N-terminal domain-like protein -0.51 0.32 -0.3
100 AT1G65760 Protein of unknown function (DUF295) -0.51 0.3 -0.32
101 AT5G19720 Ribosomal protein L25/Gln-tRNA synthetase,
anti-codon-binding domain		 0.51 0.33 -0.3
102 AT1G41820 unknown protein; Has 46 Blast hits to 46 proteins in 21
species: Archae - 0; Bacteria - 6; Metazoa - 8; Fungi - 2;
Plants - 5; Viruses - 1; Other Eukaryotes - 24 (source:
NCBI BLink).		 0.51 0.33 -0.33
103 AT3G14340 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.51 0.32 -0.3
104 AT1G16380 Cation/hydrogen exchanger family protein ATCHX1, CATION EXCHANGER 1 -0.5 0.31 -0.33
105 AT3G45460 IBR domain containing protein 0.5 0.32 -0.3
106 AT1G75600 Histone superfamily protein 0.5 0.33 -0.32
107 AT4G11300 Protein of unknown function (DUF793) 0.5 0.3 -0.31
108 AT1G70910 RING/U-box superfamily protein DESPIERTO 0.5 0.32 -0.32
109 AT1G77860 Rhomboid-related intramembrane serine protease family
protein		 KOMPEITO -0.5 0.28 -0.31
110 AT2G07455 transposable element gene 0.5 0.32 -0.3
111 AT5G38440 Plant self-incompatibility protein S1 family 0.5 0.28 -0.32
112 AT2G24830 zinc finger (CCCH-type) family protein / D111/G-patch
domain-containing protein		 0.5 0.3 -0.31
113 AT2G11235 transposable element gene 0.5 0.3 -0.32
114 AT4G18180 Pectin lyase-like superfamily protein -0.5 0.31 -0.3
115 AT2G23210 UDP-Glycosyltransferase superfamily protein -0.5 0.32 -0.31
116 AT2G32930 zinc finger nuclease 2 zinc finger nuclease 2 -0.49 0.3 -0.32
117 AT1G05800 alpha/beta-Hydrolases superfamily protein DONGLE -0.49 0.31 -0.31
118 AT5G62990 Ubiquitin carboxyl-terminal hydrolase family protein embryo defective 1692 -0.49 0.33 -0.32
119 AT2G40230 HXXXD-type acyl-transferase family protein -0.49 0.32 -0.32
120 AT5G09780 Transcriptional factor B3 family protein -0.49 0.31 -0.29
121 AT5G66710 Protein kinase superfamily protein -0.49 0.33 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
122 C0192 Oxalic acid - Oxalate ascorbate degradation 0.82 0.45 -0.45 C0192
123 C0059 Arginine amide - - - 0.75 0.44 -0.43