AT3G42350 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT3G42350
Description transposable element gene
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G42350 transposable element gene 1 0.3 -0.33
2 AT2G01790 TRAF-like family protein 0.76 0.33 -0.31
3 AT4G08650 transposable element gene 0.76 0.31 -0.32
4 AT4G16920 Disease resistance protein (TIR-NBS-LRR class) family 0.72 0.31 -0.31
5 AT5G27050 AGAMOUS-like 101 AGAMOUS-like 101 0.71 0.31 -0.35
6 AT1G34080 transposable element gene 0.71 0.3 -0.33
7 AT4G03330 syntaxin of plants 123 ATSYP123, syntaxin of plants 123 0.71 0.32 -0.3
8 AT4G36620 GATA transcription factor 19 GATA transcription factor 19,
hanaba taranu like 2		 0.71 0.32 -0.31
9 AT3G17290 transposable element gene 0.7 0.32 -0.31
10 AT2G24070 Family of unknown function (DUF566) QWRF domain containing 4 0.7 0.3 -0.32
11 AT2G23360 Plant protein of unknown function (DUF869) 0.7 0.32 -0.33
12 AT2G43250 unknown protein; Has 32 Blast hits to 32 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.69 0.29 -0.32
13 AT4G09100 RING/U-box superfamily protein 0.68 0.31 -0.32
14 AT3G44210 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G43870.1); Has 15 Blast hits
to 15 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 15; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.68 0.31 -0.32
15 AT5G14470 GHMP kinase family protein -0.68 0.32 -0.34
16 AT2G04830 Protein of unknown function (DUF295) 0.67 0.31 -0.32
17 AT1G76290 AMP-dependent synthetase and ligase family protein 0.67 0.32 -0.35
18 AT2G33460 ROP-interactive CRIB motif-containing protein 1 ROP-interactive CRIB
motif-containing protein 1		 0.67 0.3 -0.33
19 AT1G69840 SPFH/Band 7/PHB domain-containing membrane-associated
protein family		 -0.67 0.32 -0.3
20 AT3G27950 GDSL-like Lipase/Acylhydrolase superfamily protein 0.67 0.32 -0.3
21 AT1G71010 FORMS APLOID AND BINUCLEATE CELLS 1C FORMS APLOID AND BINUCLEATE CELLS
1C		 0.67 0.31 -0.31
22 AT3G61800 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF2043 (InterPro:IPR018610), ENTH/VHS
(InterPro:IPR008942); Has 308 Blast hits to 279 proteins in
95 species: Archae - 2; Bacteria - 30; Metazoa - 120; Fungi
- 19; Plants - 44; Viruses - 2; Other Eukaryotes - 91
(source: NCBI BLink).		 0.66 0.31 -0.31
23 AT5G01280 BEST Arabidopsis thaliana protein match is: proline-rich
family protein (TAIR:AT3G09000.1); Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.66 0.31 -0.3
24 AT3G10810 zinc finger (C3HC4-type RING finger) family protein 0.66 0.33 -0.33
25 AT4G03480 Ankyrin repeat family protein -0.66 0.34 -0.31
26 AT4G19000 Transcription elongation factor (TFIIS) family protein ARABIDOPSIS THALIANA IWS2 (FROM
YEAST INTERACTS WITH SPT6), IWS2		 0.66 0.31 -0.31
27 AT4G28140 Integrase-type DNA-binding superfamily protein 0.65 0.3 -0.32
28 AT3G03510 Phototropic-responsive NPH3 family protein 0.65 0.31 -0.36
29 AT5G57200 ENTH/ANTH/VHS superfamily protein 0.65 0.33 -0.34
30 AT2G24000 serine carboxypeptidase-like 22 serine carboxypeptidase-like 22 -0.65 0.31 -0.3
31 AT5G48750 Cytochrome b561/ferric reductase transmembrane with DOMON
related domain		 -0.65 0.32 -0.3
32 AT4G29340 profilin 4 profilin 4 -0.65 0.32 -0.29
33 AT4G16350 calcineurin B-like protein 6 calcineurin B-like protein 6,
SOS3-LIKE CALCIUM BINDING PROTEIN
2		 0.65 0.3 -0.32
34 AT4G00420 Double-stranded RNA-binding domain (DsRBD)-containing
protein		 -0.65 0.32 -0.31
35 AT1G75430 BEL1-like homeodomain 11 BEL1-like homeodomain 11 0.65 0.32 -0.29
36 AT3G26614 transposable element gene 0.65 0.32 -0.3
37 AT5G19600 sulfate transporter 3;5 sulfate transporter 3;5 0.65 0.3 -0.29
38 AT2G10930 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G48500.1); Has 7 Blast hits to
7 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.64 0.31 -0.32
39 AT1G35210 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED
DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF740 (InterPro:IPR008004);
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G22470.1); Has 83 Blast hits to 83 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 81; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.64 0.31 -0.31
40 AT5G53460 NADH-dependent glutamate synthase 1 NADH-dependent glutamate synthase
1		 0.64 0.32 -0.33
41 AT1G69430 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G26650.1); Has 216 Blast hits
to 215 proteins in 17 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 216; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.64 0.32 -0.32
42 AT1G49930 BEST Arabidopsis thaliana protein match is: Alanyl-tRNA
synthetase, class IIc (TAIR:AT5G22800.1); Has 21 Blast hits
to 21 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 21; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.64 0.32 -0.34
43 AT4G08030 transposable element gene -0.64 0.32 -0.34
44 AT4G13020 Protein kinase superfamily protein MHK 0.64 0.33 -0.31
45 AT1G31030 transposable element gene 0.63 0.31 -0.31
46 AT5G01860 C2H2 and C2HC zinc fingers superfamily protein 0.63 0.34 -0.29
47 AT5G06320 NDR1/HIN1-like 3 NDR1/HIN1-like 3 -0.63 0.33 -0.32
48 AT2G28940 Protein kinase superfamily protein -0.63 0.32 -0.34
49 AT2G06700 transposable element gene 0.63 0.31 -0.33
50 AT2G13550 unknown protein; Has 23 Blast hits to 20 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 9 (source: NCBI
BLink).		 0.63 0.31 -0.33
51 AT5G26700 RmlC-like cupins superfamily protein 0.63 0.31 -0.3
52 AT3G15120 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.63 0.3 -0.32
53 AT2G47160 HCO3- transporter family AtBOR1, REQUIRES HIGH BORON 1 0.63 0.3 -0.3
54 AT5G05320 FAD/NAD(P)-binding oxidoreductase family protein 0.63 0.3 -0.3
55 AT1G74160 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G18620.1); Has 3407 Blast hits
to 2217 proteins in 314 species: Archae - 0; Bacteria -
264; Metazoa - 1296; Fungi - 318; Plants - 346; Viruses -
34; Other Eukaryotes - 1149 (source: NCBI BLink).		 0.63 0.31 -0.3
56 AT1G74620 RING/U-box superfamily protein 0.62 0.31 -0.35
57 AT2G28440 proline-rich family protein 0.62 0.33 -0.32
58 AT4G29240 Leucine-rich repeat (LRR) family protein 0.62 0.31 -0.32
59 AT3G17980 Calcium-dependent lipid-binding (CaLB domain) family
protein		 Arabidopsis thaliana C2 domain, C2
domain		 0.62 0.31 -0.31
60 AT2G34980 phosphatidylinositolglycan synthase family protein SETH1 0.62 0.3 -0.32
61 AT3G32100 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; Has 1 Blast hits to 1 proteins in 1 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.62 0.33 -0.3
62 AT5G03280 NRAMP metal ion transporter family protein ATEIN2, CYTOKININ RESISTANT 1,
ETHYLENE INSENSITIVE 2, ENHANCED
RESPONSE TO ABA3, ORESARA 2,
ORESARA 3, PIR2		 0.62 0.32 -0.31
63 AT2G27380 extensin proline-rich 1 extensin proline-rich 1, extensin
proline-rich 1		 0.62 0.31 -0.3
64 AT3G02890 RING/FYVE/PHD zinc finger superfamily protein 0.62 0.31 -0.31
65 AT3G09520 exocyst subunit exo70 family protein H4 exocyst subunit exo70 family
protein H4, exocyst subunit exo70
family protein H4		 -0.61 0.31 -0.31
66 AT1G21710 8-oxoguanine-DNA glycosylase 1 ARABIDOPSIS 8-OXOGUANINE-DNA
GLYCOSYLASE 1, 8-oxoguanine-DNA
glycosylase 1		 0.61 0.32 -0.31
67 AT4G03340 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 0.61 0.31 -0.33
68 AT3G59130 Cysteine/Histidine-rich C1 domain family protein -0.61 0.32 -0.33
69 AT3G23870 Protein of unknown function (DUF803) 0.6 0.33 -0.31
70 AT2G36020 HVA22-like protein J HVA22-like protein J -0.6 0.33 -0.31
71 AT1G05550 Protein of unknown function (DUF295) 0.6 0.3 -0.31
72 AT5G14930 senescence-associated gene 101 senescence-associated gene 101 -0.6 0.32 -0.33
73 AT5G32470 Haem oxygenase-like, multi-helical 0.6 0.33 -0.31
74 AT1G62440 leucine-rich repeat/extensin 2 leucine-rich repeat/extensin 2 0.6 0.31 -0.31
75 AT5G28410 unknown protein; Has 8 Blast hits to 7 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 8; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.6 0.32 -0.3
76 AT1G69120 K-box region and MADS-box transcription factor family
protein 		AGAMOUS-like 7, APETALA1 0.6 0.31 -0.32
77 AT2G20142 Toll-Interleukin-Resistance (TIR) domain family protein -0.6 0.33 -0.31
78 AT3G24650 AP2/B3-like transcriptional factor family protein ABA INSENSITIVE 3, ABSCISIC ACID
INSENSITIVE 3, SUGAR INSENSITIVE
10		 0.6 0.3 -0.29
79 AT2G04380 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.6 0.31 -0.33
80 AT3G44760 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: root, flower; EXPRESSED
DURING: petal differentiation and expansion stage; BEST
Arabidopsis thaliana protein match is: Protein of unknown
function (DUF626) (TAIR:AT3G44770.1); Has 9 Blast hits to 9
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 9; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.6 0.34 -0.32
81 AT2G17660 RPM1-interacting protein 4 (RIN4) family protein -0.6 0.33 -0.33
82 AT1G51700 DOF zinc finger protein 1 DOF zinc finger protein 1, DOF
zinc finger protein 1		 -0.6 0.32 -0.3
83 AT3G43100 transposable element gene 0.59 0.31 -0.3
84 AT2G46400 WRKY DNA-binding protein 46 WRKY DNA-BINDING PROTEIN 46, WRKY
DNA-binding protein 46		 -0.59 0.3 -0.33
85 AT2G41420 proline-rich family protein WINDHOSE 2 -0.59 0.33 -0.29
86 AT5G11050 myb domain protein 64 myb domain protein 64, myb domain
protein 64		 0.59 0.3 -0.31
87 AT5G55020 myb domain protein 120 ATMYB120, myb domain protein 120 0.59 0.31 -0.33
88 AT5G48990 Galactose oxidase/kelch repeat superfamily protein 0.59 0.31 -0.33
89 AT3G21830 SKP1-like 8 SKP1-like 8, SKP1-like 8 -0.59 0.33 -0.31
90 AT5G66100 winged-helix DNA-binding transcription factor family
protein		 -0.59 0.32 -0.33
91 AT2G15720 transposable element gene 0.59 0.3 -0.29
92 AT3G30190 transposable element gene 0.59 0.32 -0.32
93 AT1G68720 tRNA arginine adenosine deaminase ARABIDOPSIS THALIANA TRNA
ADENOSINE DEAMINASE A, tRNA
arginine adenosine deaminase		 0.59 0.3 -0.33
94 AT3G23250 myb domain protein 15 MYB DOMAIN PROTEIN 15, ATY19, myb
domain protein 15		 -0.58 0.31 -0.34
95 AT5G52140 RING/U-box superfamily protein -0.58 0.29 -0.3
96 AT3G47700 RINT-1 / TIP-1 family maigo2 -0.58 0.31 -0.32
97 AT3G42730 transposable element gene -0.58 0.31 -0.3
98 AT2G17950 Homeodomain-like superfamily protein PGA6, WUSCHEL, WUSCHEL 1 -0.58 0.32 -0.3
99 AT5G04210 CCCH-type zinc fingerfamily protein with RNA-binding domain -0.58 0.34 -0.31
100 AT3G22060 Receptor-like protein kinase-related family protein -0.58 0.31 -0.31
101 AT3G19780 LOCATED IN: endomembrane system; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF179
(InterPro:IPR003774), Thioredoxin fold
(InterPro:IPR012335), Thioredoxin-like fold
(InterPro:IPR012336); BEST Arabidopsis thaliana protein
match is: Protein of unknown function (DUF179)
(TAIR:AT1G33780.1); Has 74 Blast hits to 72 proteins in 32
species: Archae - 0; Bacteria - 24; Metazoa - 11; Fungi -
3; Plants - 32; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 -0.57 0.31 -0.31
102 AT3G11820 syntaxin of plants 121 AT-SYR1, ATSYP121, SYNTAXIN
RELATED PROTEIN 1, PENETRATION1,
syntaxin of plants 121, SYNTAXIN
RELATED PROTEIN 1		 -0.57 0.33 -0.31
103 AT5G18880 RNA-directed DNA polymerase (reverse transcriptase)-related
family protein		 -0.57 0.33 -0.31
104 AT1G75600 Histone superfamily protein -0.56 0.32 -0.29
105 AT1G07300 josephin protein-related -0.56 0.32 -0.31
106 AT2G22630 AGAMOUS-like 17 AGAMOUS-like 17 -0.56 0.32 -0.32
107 AT5G24240 Phosphatidylinositol 3- and 4-kinase ;Ubiquitin family
protein		 -0.56 0.33 -0.31
108 AT2G41570 transposable element gene -0.56 0.32 -0.32
109 AT3G13640 RNAse l inhibitor protein 1 ATP-binding cassette E1, RNAse l
inhibitor protein 1, RNAse l
inhibitor protein 1		 -0.55 0.33 -0.32
110 AT3G30220 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G43150.1); Has 30 Blast hits
to 30 proteins in 3 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.55 0.31 -0.3
111 AT1G33760 Integrase-type DNA-binding superfamily protein -0.55 0.29 -0.32
112 AT2G37430 C2H2 and C2HC zinc fingers superfamily protein -0.55 0.33 -0.32
113 AT5G35920 cytochrome P450, family 79, subfamily A, polypeptide 4
pseudogene		 cytochrome P450, family 79,
subfamily A, polypeptide 4
pseudogene		 -0.55 0.32 -0.3
114 AT4G13320 unknown protein; Has 68 Blast hits to 67 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 68; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.54 0.32 -0.33
115 AT1G44510 transposable element gene -0.54 0.32 -0.3
116 AT2G35290 unknown protein; Has 39 Blast hits to 39 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.54 0.29 -0.31
117 AT5G26920 Cam-binding protein 60-like G Cam-binding protein 60-like G -0.54 0.31 -0.32
118 AT5G47850 CRINKLY4 related 4 CRINKLY4 related 4 -0.54 0.32 -0.31
119 AT3G17620 F-box and associated interaction domains-containing protein -0.54 0.31 -0.32
120 AT3G53910 malate dehydrogenase-related -0.54 0.33 -0.32
121 AT1G18740 Protein of unknown function (DUF793) -0.54 0.31 -0.33
122 AT5G11940 Subtilase family protein -0.53 0.3 -0.31
123 AT1G73805 Calmodulin binding protein-like SAR Deficient 1 -0.53 0.29 -0.3
124 AT3G05460 sporozoite surface protein-related -0.53 0.31 -0.31
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
125 C0149 Mevalonolactone D,L-Mevalonolactone - terpenoid biosynthesis 0.68 0.46 -0.45