AT3G42360 : -
Query Information
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AGICode AT3G42360
Description transposable element gene
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G42360 transposable element gene 1 0.3 -0.31
2 AT4G27330 sporocyteless (SPL) NOZZLE, SPOROCYTELESS 0.63 0.31 -0.32
3 AT2G42940 Predicted AT-hook DNA-binding family protein 0.63 0.3 -0.31
4 AT1G77010 Pentatricopeptide repeat (PPR) superfamily protein 0.63 0.3 -0.31
5 ATCG00170 DNA-directed RNA polymerase family protein RPOC2 0.62 0.31 -0.31
6 AT2G18915 LOV KELCH protein 2 ADAGIO 2, LOV KELCH protein 2 0.62 0.31 -0.31
7 AT4G19191 Tetratricopeptide repeat (TPR)-like superfamily protein 0.62 0.31 -0.32
8 AT1G73710 Pentatricopeptide repeat (PPR) superfamily protein 0.62 0.32 -0.3
9 AT2G15550 transposable element gene 0.6 0.31 -0.34
10 AT1G31430 Pentatricopeptide repeat (PPR-like) superfamily protein 0.6 0.32 -0.32
11 AT4G38880 GLN phosphoribosyl pyrophosphate amidotransferase 3 GLN phosphoribosyl pyrophosphate
amidotransferase 3, GLN
phosphoribosyl pyrophosphate
amidotransferase 3		 0.6 0.29 -0.32
12 AT5G46100 Pentatricopeptide repeat (PPR) superfamily protein 0.59 0.31 -0.3
13 AT5G56610 Phosphotyrosine protein phosphatases superfamily protein -0.58 0.3 -0.33
14 AT4G32300 S-domain-2 5 S-domain-2 5 0.57 0.33 -0.3
15 AT5G33340 Eukaryotic aspartyl protease family protein CONSTITUTIVE DISEASE RESISTANCE 1 0.57 0.3 -0.31
16 AT5G63590 flavonol synthase 3 ATFLS3, flavonol synthase 3 -0.57 0.32 -0.31
17 AT1G43730 RNA-directed DNA polymerase (reverse transcriptase)-related
family protein		 0.57 0.31 -0.33
18 AT3G24050 GATA transcription factor 1 GATA transcription factor 1 0.57 0.32 -0.35
19 AT3G03580 Tetratricopeptide repeat (TPR)-like superfamily protein 0.57 0.33 -0.32
20 AT4G16270 Peroxidase superfamily protein -0.56 0.3 -0.31
21 AT3G12140 Emsy N Terminus (ENT)/ plant Tudor-like domains-containing
protein		 AtEML1, EMSY-like 1 0.55 0.34 -0.34
22 AT1G23340 Protein of Unknown Function (DUF239) -0.55 0.34 -0.31
23 AT3G26990 ENTH/VHS family protein 0.54 0.31 -0.32
24 AT4G10010 Protein kinase superfamily protein 0.54 0.31 -0.35
25 AT1G21580 Zinc finger C-x8-C-x5-C-x3-H type family protein 0.54 0.32 -0.34
26 AT1G25460 NAD(P)-binding Rossmann-fold superfamily protein -0.54 0.32 -0.31
27 AT5G22730 F-box/RNI-like/FBD-like domains-containing protein 0.54 0.33 -0.31
28 AT2G05960 transposable element gene 0.53 0.29 -0.3
29 AT2G15640 F-box family protein -0.53 0.3 -0.33
30 AT3G01700 arabinogalactan protein 11 arabinogalactan protein 11,
ARABINOGALACTAN PROTEIN 11		 0.53 0.31 -0.32
31 AT5G18360 Disease resistance protein (TIR-NBS-LRR class) family -0.52 0.31 -0.31
32 AT5G01360 Plant protein of unknown function (DUF828) TRICHOME BIREFRINGENCE-LIKE 3 -0.52 0.33 -0.31
33 AT3G08810 Galactose oxidase/kelch repeat superfamily protein 0.52 0.34 -0.32
34 AT3G28170 unknown protein; Has 2 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.52 0.32 -0.32
35 ATMG01240 hypothetical protein ORF100C 0.52 0.32 -0.31
36 AT1G68580 agenet domain-containing protein / bromo-adjacent homology
(BAH) domain-containing protein		 0.52 0.31 -0.32
37 AT4G15250 B-box type zinc finger protein with CCT domain -0.52 0.3 -0.32
38 AT5G37160 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.52 0.32 -0.32
39 AT4G09690 Cysteine/Histidine-rich C1 domain family protein 0.52 0.31 -0.31
40 AT2G02061 Nucleotide-diphospho-sugar transferase family protein 0.51 0.32 -0.32
41 AT4G09610 GAST1 protein homolog 2 GAST1 protein homolog 2 0.51 0.34 -0.32
42 AT2G42780 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
regulation of transcription; LOCATED IN: integral to
membrane, nucleus; EXPRESSED IN: 20 plant structures;
EXPRESSED DURING: 11 growth stages; CONTAINS InterPro
DOMAIN/s: RNA polymerase II transcription factor SIII,
subunit A (InterPro:IPR010684); Has 187 Blast hits to 186
proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa -
104; Fungi - 29; Plants - 38; Viruses - 0; Other Eukaryotes
- 16 (source: NCBI BLink).		 -0.5 0.31 -0.33
43 AT4G39490 cytochrome P450, family 96, subfamily A, polypeptide 10 cytochrome P450, family 96,
subfamily A, polypeptide 10		 -0.5 0.3 -0.34
44 AT5G11300 mitotic-like cyclin 3B from Arabidopsis CYC2BAT, mitotic-like cyclin 3B
from Arabidopsis, CYCLIN A2;2		 -0.5 0.31 -0.33
45 AT5G28670 transposable element gene -0.5 0.32 -0.32
46 AT3G49340 Cysteine proteinases superfamily protein -0.5 0.32 -0.3
47 AT3G58290 TRAF-like superfamily protein -0.5 0.3 -0.31
48 AT2G42930 Carbohydrate-binding X8 domain superfamily protein 0.49 0.3 -0.31
49 AT5G19200 NAD(P)-binding Rossmann-fold superfamily protein TSC10B -0.49 0.32 -0.32
50 AT4G19480 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.49 0.31 -0.31
51 AT1G56410 heat shock protein 70 (Hsp 70) family protein EARLY-RESPONSIVE TO DEHYDRATION 2,
HEAT SHOCK PROTEIN 70T-1		 -0.49 0.33 -0.32
52 AT2G02140 low-molecular-weight cysteine-rich 72 low-molecular-weight cysteine-rich
72, PDF2.6		 0.49 0.32 -0.31
53 AT1G52830 indole-3-acetic acid 6 indole-3-acetic acid 6, SHORT
HYPOCOTYL 1		 -0.49 0.33 -0.3
54 ATMG00140 hypothetical protein ORF167 -0.48 0.33 -0.31
55 AT1G55990 glycine-rich protein -0.46 0.32 -0.31
56 AT4G23910 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G10970.4); Has 52 Blast hits
to 52 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 52; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.45 0.32 -0.29
57 AT2G31085 CLAVATA3/ESR-RELATED 6 AtCLE6, CLAVATA3/ESR-RELATED 6 -0.45 0.3 -0.31
58 AT1G10810 NAD(P)-linked oxidoreductase superfamily protein -0.45 0.33 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
59 C0091 Fructose-1,6-bisphosphate D-Fructose-1,6-bisphosphate Fructose-1,6-bisphosphate gluconeogenesis I,
Calvin-Benson-Bassham cycle,
glycolysis IV (plant cytosol),
glycolysis I,
CA1P biosynthesis,
sucrose biosynthesis I 		-0.69 0.45 -0.45 C0091
60 C0087 Erythrose-4-phosphate D-Erythrose-4-phosphate D-Erythrose-4-phosphate Rubisco shunt,
pentose phosphate pathway (non-oxidative branch),
chorismate biosynthesis,
Calvin-Benson-Bassham cycle 		-0.63 0.43 -0.45 C0087
61 C0075 dGDP - dGDP purine nucleotide metabolism (phosphotransfer and nucleotide modification) -0.59 0.46 -0.42 C0075
62 C0015 p-Coumaric acid - 4-Coumarate scopoletin biosynthesis,
free phenylpropanoid acid biosynthesis,
phenylpropanoid biosynthesis,
simple coumarins biosynthesis,
4-hydroxybenzoate biosynthesis V,
suberin biosynthesis,
phenylpropanoid biosynthesis, initial reactions,
flavonoid biosynthesis 		-0.58 0.45 -0.44 C0015