AT3G42440 : -
Query Information
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AGICode AT3G42440
Description transposable element gene
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G42440 transposable element gene 1 0.3 -0.31
2 AT3G42960 TAPETUM 1 ASD, TAPETUM 1, TAPETUM1 0.76 0.31 -0.34
3 AT5G58003 C-terminal domain phosphatase-like 4 C-terminal domain phosphatase-like
4		 -0.73 0.31 -0.32
4 AT3G42390 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.73 0.31 -0.31
5 AT5G28940 transposable element gene 0.71 0.37 -0.33
6 AT2G29820 Galactose oxidase/kelch repeat superfamily protein 0.7 0.31 -0.33
7 AT4G18890 BES1/BZR1 homolog 3 BES1/BZR1 homolog 3 0.69 0.3 -0.31
8 AT4G36160 NAC domain containing protein 76 NAC domain containing protein 76,
NAC domain containing protein 76,
VASCULAR-RELATED NAC-DOMAIN 2		 -0.69 0.31 -0.31
9 AT5G37620 Cysteine/Histidine-rich C1 domain family protein 0.69 0.31 -0.31
10 AT1G58210 kinase interacting family protein EMBRYO DEFECTIVE 1674 0.69 0.32 -0.3
11 AT2G22760 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.69 0.29 -0.33
12 AT5G58050 SHV3-like 4 Glycerophosphodiester
phosphodiesterase (GDPD) like 6,
SHV3-like 4		 0.67 0.33 -0.29
13 AT3G60760 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.67 0.32 -0.3
14 AT1G59950 NAD(P)-linked oxidoreductase superfamily protein 0.67 0.32 -0.32
15 AT5G64110 Peroxidase superfamily protein -0.67 0.32 -0.33
16 AT2G10440 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G15780.1); Has 8319 Blast hits
to 5104 proteins in 317 species: Archae - 0; Bacteria -
285; Metazoa - 1706; Fungi - 535; Plants - 320; Viruses -
18; Other Eukaryotes - 5455 (source: NCBI BLink).		 0.66 0.32 -0.31
17 AT4G07920 transposable element gene -0.66 0.33 -0.32
18 AT1G47350 F-box associated ubiquitination effector family protein -0.66 0.31 -0.35
19 AT3G09130 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G42786.1); Has 7 Blast hits to
7 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.66 0.31 -0.32
20 AT2G45930 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT4G16090.1); Has 161 Blast hits to
161 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 161; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.66 0.36 -0.31
21 AT4G10260 pfkB-like carbohydrate kinase family protein 0.66 0.31 -0.34
22 AT3G09960 Calcineurin-like metallo-phosphoesterase superfamily
protein		 0.65 0.31 -0.29
23 AT5G52690 Copper transport protein family -0.65 0.32 -0.3
24 AT2G47150 NAD(P)-binding Rossmann-fold superfamily protein 0.65 0.31 -0.31
25 AT2G07630 transposable element gene 0.65 0.3 -0.34
26 AT4G37220 Cold acclimation protein WCOR413 family -0.65 0.31 -0.31
27 AT4G18420 transposable element gene 0.65 0.31 -0.31
28 AT4G15320 cellulose synthase-like B6 cellulose synthase-like B6,
CELLULOSE SYNTHASE LIKE B6,
CSLB06, cellulose synthase-like B6		 -0.65 0.31 -0.31
29 AT3G12250 TGACG motif-binding factor 6 BZIP45, TGACG motif-binding factor
6		 -0.65 0.29 -0.31
30 AT2G45660 AGAMOUS-like 20 AGAMOUS-like 20, SUPPRESSOR OF
OVEREXPRESSION OF CO 1, SUPPRESSOR
OF OVEREXPRESSION OF CO 1		 -0.64 0.3 -0.31
31 AT2G05170 vacuolar protein sorting 11 vacuolar protein sorting 11,
vacuolar protein sorting 11		 0.64 0.29 -0.33
32 AT5G37900 TRAF-like superfamily protein -0.64 0.34 -0.3
33 AT1G32850 ubiquitin-specific protease 11 ubiquitin-specific protease 11 0.64 0.33 -0.33
34 AT2G10400 transposable element gene -0.64 0.29 -0.31
35 AT5G50500 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.64 0.32 -0.29
36 AT1G09940 Glutamyl-tRNA reductase family protein HEMA2 0.64 0.35 -0.29
37 AT2G36710 Pectin lyase-like superfamily protein -0.63 0.32 -0.32
38 AT5G28170 transposable element gene 0.63 0.31 -0.31
39 AT3G59630 diphthamide synthesis DPH2 family protein 0.63 0.3 -0.31
40 AT4G32750 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.63 0.31 -0.33
41 AT5G64905 elicitor peptide 3 precursor elicitor peptide 3 precursor 0.63 0.32 -0.3
42 AT3G24460 Serinc-domain containing serine and sphingolipid
biosynthesis protein		 0.63 0.31 -0.3
43 AT5G06140 sorting nexin 1 ARABIDOPSIS THALIANA SORTING NEXIN
1, sorting nexin 1		 -0.63 0.32 -0.31
44 AT3G22940 F-box associated ubiquitination effector family protein -0.63 0.32 -0.32
45 AT3G11040 Glycosyl hydrolase family 85 AtENGase85B,
Endo-beta-N-acetyglucosaminidase
85B		 0.62 0.35 -0.29
46 AT3G60250 casein kinase II beta chain 3 casein kinase II beta chain 3 -0.62 0.33 -0.34
47 AT1G05770 Mannose-binding lectin superfamily protein -0.62 0.32 -0.31
48 AT5G46730 glycine-rich protein -0.62 0.33 -0.3
49 AT1G03410 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 2A6 0.62 0.32 -0.31
50 AT3G42070 transposable element gene 0.62 0.34 -0.3
51 AT4G08880 transposable element gene 0.62 0.3 -0.31
52 AT2G01300 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G15010.1); Has 73 Blast hits
to 73 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.62 0.33 -0.33
53 AT4G24580 Rho GTPase activation protein (RhoGAP) with PH domain ROP1 ENHANCER 1 -0.62 0.32 -0.31
54 AT5G30420 pseudogene, hypothetical protein 0.62 0.32 -0.32
55 AT5G52360 actin depolymerizing factor 10 actin depolymerizing factor 10 -0.62 0.31 -0.32
56 AT1G05330 unknown protein; Has 6 Blast hits to 6 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.61 0.32 -0.33
57 AT4G17710 homeodomain GLABROUS 4 homeodomain GLABROUS 4 0.61 0.3 -0.32
58 AT3G57920 squamosa promoter binding protein-like 15 squamosa promoter binding
protein-like 15		 0.61 0.31 -0.3
59 AT1G36150 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.61 0.32 -0.32
60 AT3G48960 Ribosomal protein L13e family protein 0.61 0.33 -0.3
61 AT3G30750 transposable element gene -0.61 0.33 -0.32
62 AT4G20470 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.61 0.33 -0.31
63 AT2G17480 Seven transmembrane MLO family protein MILDEW RESISTANCE LOCUS O 8,
MILDEW RESISTANCE LOCUS O 8		 0.61 0.29 -0.32
64 AT5G11530 embryonic flower 1 (EMF1) embryonic flower 1 -0.61 0.31 -0.3
65 AT1G64450 Glycine-rich protein family 0.61 0.33 -0.32
66 AT5G18160 F-box and associated interaction domains-containing protein -0.61 0.33 -0.31
67 AT5G51900 Cytochrome P450 family protein -0.61 0.31 -0.32
68 AT3G58690 Protein kinase superfamily protein -0.61 0.27 -0.32
69 AT1G74390 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 -0.61 0.31 -0.32
70 AT5G17480 pollen calcium-binding protein 1 pollen calcium-binding protein 1,
pollen calcium-binding protein 1		 -0.6 0.33 -0.32
71 AT5G63640 ENTH/VHS/GAT family protein -0.6 0.33 -0.33
72 AT1G70080 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 0.6 0.31 -0.31
73 AT3G11980 Jojoba acyl CoA reductase-related male sterility protein FATTY ACID REDUCTASE 2, MALE
STERILITY 2		 0.6 0.34 -0.33
74 AT5G62880 RAC-like 10 RAC-like 10, ARABIDOPSIS THALIANA
RAC-LIKE 10, RHO-RELATED PROTEIN
FROM PLANTS 11, RAC-like 10,
RHO-related protein from plants 11		 -0.6 0.33 -0.3
75 AT1G47660 unknown protein; Has 5165 Blast hits to 2753 proteins in
450 species: Archae - 12; Bacteria - 1193; Metazoa - 731;
Fungi - 361; Plants - 761; Viruses - 176; Other Eukaryotes
- 1931 (source: NCBI BLink).		 0.6 0.32 -0.32
76 AT1G29020 Calcium-binding EF-hand family protein 0.6 0.34 -0.31
77 AT3G28120 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; Has 0 Blast hits to 0 proteins in 0
species (source: NCBI BLink).		 0.6 0.31 -0.31
78 AT5G44760 C2 domain-containing protein -0.6 0.28 -0.35
79 AT3G26614 transposable element gene 0.6 0.31 -0.32
80 AT4G36105 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
nucleus; EXPRESSED IN: 6 plant structures; EXPRESSED
DURING: LP.04 four leaves visible, 4 anthesis, petal
differentiation and expansion stage; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G17990.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 0.6 0.29 -0.29
81 AT4G29200 Beta-galactosidase related protein -0.6 0.31 -0.31
82 AT3G24780 Uncharacterised conserved protein UCP015417, vWA 0.59 0.31 -0.31
83 AT1G19500 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 9 plant structures;
EXPRESSED DURING: L mature pollen stage, M germinated
pollen stage, 4 anthesis, C globular stage, petal
differentiation and expansion stage; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G35765.1); Has 9 Blast hits to 9 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.59 0.31 -0.3
84 AT2G15790 peptidyl-prolyl cis-trans isomerase / cyclophilin-40
(CYP40) / rotamase		 CYCLOPHILIN 40, SQUINT -0.59 0.32 -0.31
85 AT1G49250 ATP-dependent DNA ligase 0.59 0.31 -0.31
86 AT2G30925 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.59 0.31 -0.3
87 AT3G15890 Protein kinase superfamily protein -0.59 0.32 -0.3
88 AT4G09130 RING/U-box superfamily protein 0.59 0.34 -0.32
89 AT4G07640 transposable element gene 0.59 0.31 -0.31
90 AT2G32400 glutamate receptor 5 ATGLR3.7, GLUTAMATE RECEPTOR 3.7,
glutamate receptor 5		 0.59 0.32 -0.3
91 AT1G50300 TBP-associated factor 15 TBP-associated factor 15 -0.58 0.34 -0.3
92 AT1G02550 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 -0.58 0.31 -0.31
93 AT3G62880 Mitochondrial import inner membrane translocase subunit
Tim17/Tim22/Tim23 family protein		 ATOEP16-4 -0.58 0.32 -0.33
94 AT3G07300 NagB/RpiA/CoA transferase-like superfamily protein -0.58 0.33 -0.29
95 AT3G27380 succinate dehydrogenase 2-1 succinate dehydrogenase 2-1 -0.58 0.3 -0.31
96 AT4G00190 pectin methylesterase 38 A. THALIANA PECTIN METHYLESTERASE
38, pectin methylesterase 38		 -0.57 0.34 -0.34
97 AT5G17460 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to salt stress; LOCATED IN:
mitochondrion; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.57 0.31 -0.33
98 AT1G53930 Ubiquitin-like superfamily protein -0.57 0.29 -0.33
99 AT2G29700 pleckstrin homologue 1 pleckstrin homologue 1, pleckstrin
homologue 1		 -0.57 0.31 -0.32
100 AT5G43480 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.57 0.29 -0.3
101 AT1G57906 unknown protein; BEST Arabidopsis thaliana protein match
is: F-box family protein with a domain of unknown function
(DUF295) (TAIR:AT2G17690.1); Has 57 Blast hits to 57
proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.57 0.33 -0.32
102 AT2G40935 PLAC8 family protein -0.57 0.29 -0.33
103 AT3G01010 UDP-glucose/GDP-mannose dehydrogenase family protein -0.57 0.31 -0.33
104 AT5G56140 RNA-binding KH domain-containing protein -0.57 0.32 -0.3
105 AT1G04650 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.56 0.31 -0.33
106 AT1G18290 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
chloroplast; EXPRESSED IN: root; Has 94 Blast hits to 94
proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.56 0.31 -0.32
107 AT4G24500 hydroxyproline-rich glycoprotein family protein -0.56 0.3 -0.3
108 AT1G17230 Leucine-rich receptor-like protein kinase family protein -0.56 0.31 -0.3
109 AT4G29000 Tesmin/TSO1-like CXC domain-containing protein -0.56 0.31 -0.31
110 AT5G14530 Transducin/WD40 repeat-like superfamily protein -0.56 0.31 -0.33
111 AT1G17040 SH2 domain protein A ARABIDOPSIS THALIANA SH2 DOMAIN
PROTEIN A, SH2 domain protein A,
STAT-TYPE LINKER-SH2 DOMAIN FACTOR
A		 -0.56 0.33 -0.31
112 AT3G22870 F-box and associated interaction domains-containing protein -0.56 0.31 -0.32
113 AT5G18120 APR-like 7 APR-like 7, APR-like 7 -0.56 0.31 -0.3
114 AT5G63320 nuclear protein X1 nuclear protein X1 -0.56 0.31 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
115 C0131 Kaempferol-3-O-β-glucopyranoside-7-O-α-rhamnopyranoside Kaempferol-3-O-β-D-glucopyranoside-7-O-α-L-rhamnopyranoside Kaempferol-3-glucoside-7-rhamnoside kaempferol glucoside biosynthesis (Arabidopsis) 0.77 0.44 -0.47 C0131
116 C0188 Nicotine (-)-Nicotine Nicotine - 0.66 0.46 -0.47 C0188