AT3G42600 : -
Query Information
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AGICode AT3G42600
Description transposable element gene
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G42600 transposable element gene 1 0.3 -0.29
2 AT1G68460 isopentenyltransferase 1 Arabidopsis thaliana
isopentenyltransferase 1,
isopentenyltransferase 1		 0.78 0.3 -0.32
3 AT1G27820 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 -0.78 0.32 -0.3
4 AT1G59535 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.77 0.3 -0.29
5 AT1G30350 Pectin lyase-like superfamily protein 0.77 0.31 -0.31
6 AT1G77405 Pentatricopeptide repeat (PPR) superfamily protein 0.76 0.31 -0.31
7 AT5G54420 Protein of unknown function (DUF295) 0.76 0.32 -0.34
8 AT1G30710 FAD-binding Berberine family protein -0.76 0.3 -0.31
9 AT5G34900 transposable element gene 0.76 0.31 -0.32
10 AT2G31100 alpha/beta-Hydrolases superfamily protein 0.75 0.32 -0.3
11 AT5G28070 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.75 0.32 -0.32
12 AT1G06490 glucan synthase-like 7 Arabidopsis thaliana glucan
synthase-like 7, atgsl7, callose
synthase 7, gsl07, glucan
synthase-like 7, glucan
synthase-like 7		 0.74 0.3 -0.31
13 AT4G15200 formin 3 formin 3, formin 3 0.74 0.31 -0.33
14 AT4G38000 DNA binding with one finger 4.7 DNA binding with one finger 4.7 0.74 0.31 -0.32
15 AT4G11530 cysteine-rich RLK (RECEPTOR-like protein kinase) 34 cysteine-rich RLK (RECEPTOR-like
protein kinase) 34		 0.74 0.32 -0.3
16 AT3G66656 AGAMOUS-like 91 AGAMOUS-like 91 -0.74 0.3 -0.33
17 AT4G29285 low-molecular-weight cysteine-rich 24 low-molecular-weight cysteine-rich
24		 0.74 0.32 -0.31
18 AT1G33870 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.73 0.3 -0.32
19 AT3G42960 TAPETUM 1 ASD, TAPETUM 1, TAPETUM1 0.73 0.34 -0.32
20 AT1G69990 Leucine-rich repeat protein kinase family protein 0.73 0.3 -0.31
21 AT3G21800 UDP-glucosyl transferase 71B8 UDP-glucosyl transferase 71B8 0.73 0.31 -0.3
22 AT1G42460 transposable element gene 0.73 0.31 -0.32
23 AT2G45200 golgi snare 12 ATGOS12, golgi snare 12 -0.72 0.33 -0.34
24 AT2G05000 transposable element gene 0.72 0.32 -0.32
25 AT2G16760 Calcium-dependent phosphotriesterase superfamily protein 0.72 0.28 -0.29
26 AT3G42430 transposable element gene -0.72 0.31 -0.34
27 AT5G13670 nodulin MtN21 /EamA-like transporter family protein 0.72 0.3 -0.29
28 AT4G18420 transposable element gene 0.72 0.33 -0.31
29 AT5G46310 WRKY family transcription factor 0.72 0.33 -0.31
30 AT1G20280 homeobox-leucine zipper protein-related 0.72 0.33 -0.34
31 AT1G33280 NAC domain containing protein 15 NAC domain containing protein 15,
BEARSKIN 1, NAC domain containing
protein 15		 0.72 0.31 -0.32
32 AT2G18820 transposable element gene 0.71 0.32 -0.29
33 AT5G22550 Plant protein of unknown function (DUF247) 0.71 0.32 -0.3
34 AT5G50300 Xanthine/uracil permease family protein ARABIDOPSIS THALIANA AZA-GUANINE
RESISTANT2, AZA-GUANINE RESISTANT2		 0.71 0.31 -0.32
35 AT5G65510 AINTEGUMENTA-like 7 AINTEGUMENTA-like 7, PLETHORA 7 0.71 0.32 -0.32
36 AT5G51160 Ankyrin repeat family protein 0.71 0.3 -0.31
37 AT1G72570 Integrase-type DNA-binding superfamily protein -0.71 0.3 -0.3
38 AT3G45000 SNF7 family protein VPS24, VPS24.2 0.71 0.32 -0.31
39 AT4G20235 cytochrome P450, family 71, subfamily A, polypeptide 28 cytochrome P450, family 71,
subfamily A, polypeptide 28		 0.71 0.33 -0.32
40 AT3G42850 Mevalonate/galactokinase family protein 0.7 0.31 -0.31
41 AT2G24070 Family of unknown function (DUF566) QWRF domain containing 4 0.7 0.33 -0.31
42 AT2G36760 UDP-glucosyl transferase 73C2 UDP-glucosyl transferase 73C2 0.7 0.31 -0.32
43 AT5G60090 Protein kinase superfamily protein 0.7 0.31 -0.31
44 AT4G03640 transposable element gene 0.69 0.31 -0.32
45 AT1G27160 valyl-tRNA synthetase / valine--tRNA ligase-related -0.69 0.33 -0.31
46 AT1G32410 Vacuolar protein sorting 55 (VPS55) family protein -0.69 0.3 -0.32
47 AT4G05500 pseudogene, F-box protein family, AtFBL9/AtFBL23, contains
similarity to N7 protein GI:3273101 from (Medicago
truncatula); blastp match of 39% identity and 1.6e-34
P-value to GP|3273101|emb|CAA76808.1||Y17613 N7 protein
{Medicago truncatula}		 0.69 0.31 -0.29
48 AT5G28590 DNA-binding family protein 0.69 0.32 -0.31
49 AT4G21130 Transducin/WD40 repeat-like superfamily protein EMBRYO DEFECTIVE 2271 -0.69 0.32 -0.32
50 AT2G18340 late embryogenesis abundant domain-containing protein / LEA
domain-containing protein		 -0.69 0.31 -0.31
51 AT2G33460 ROP-interactive CRIB motif-containing protein 1 ROP-interactive CRIB
motif-containing protein 1		 0.69 0.3 -0.31
52 AT5G14620 domains rearranged methyltransferase 2 DMT7, domains rearranged
methyltransferase 2		 0.69 0.29 -0.35
53 AT1G45545 Plant protein of unknown function (DUF827) 0.69 0.34 -0.34
54 AT4G01710 ARP2/3 complex 16 kDa subunit (p16-Arc) ARPC5, CROOKED -0.68 0.32 -0.29
55 AT3G43100 transposable element gene 0.68 0.29 -0.32
56 AT1G50910 unknown protein; Has 1105 Blast hits to 802 proteins in 217
species: Archae - 2; Bacteria - 177; Metazoa - 445; Fungi -
210; Plants - 58; Viruses - 6; Other Eukaryotes - 207
(source: NCBI BLink).		 0.68 0.3 -0.31
57 AT4G09100 RING/U-box superfamily protein 0.68 0.29 -0.3
58 AT4G11590 F-box associated ubiquitination effector family protein 0.68 0.31 -0.32
59 AT1G30010 Intron maturase, type II family protein 0.68 0.34 -0.32
60 AT3G04810 NIMA-related kinase 2 NIMA-related kinase 2,
NIMA-related kinase 2		 0.68 0.29 -0.29
61 AT3G25260 Major facilitator superfamily protein 0.68 0.32 -0.31
62 AT2G46590 Dof-type zinc finger DNA-binding family protein DOF AFFECTING GERMINATION 2 0.68 0.3 -0.31
63 AT2G20160 E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family
protein		 ARABIDOPSIS SKP1-LIKE 17, MEIDOS 0.68 0.32 -0.31
64 AT3G05960 sugar transporter 6 SUGAR TRANSPORTER 6, sugar
transporter 6		 0.68 0.32 -0.3
65 AT1G02540 unknown protein; Has 3327 Blast hits to 2216 proteins in
265 species: Archae - 18; Bacteria - 202; Metazoa - 802;
Fungi - 283; Plants - 84; Viruses - 187; Other Eukaryotes -
1751 (source: NCBI BLink).		 0.68 0.34 -0.31
66 AT1G14750 Cyclin family protein SOLO DANCERS -0.68 0.31 -0.31
67 AT3G16380 poly(A) binding protein 6 poly(A) binding protein 6 0.68 0.31 -0.31
68 AT3G12840 unknown protein; Has 0 Blast hits to 0 proteins in 0
species (source: NCBI BLink).		 0.68 0.32 -0.31
69 AT1G02320 unknown protein; Has 0 Blast hits to 0 proteins in 0
species (source: NCBI BLink).		 -0.68 0.31 -0.33
70 AT2G21780 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G39360.1); Has 13 Blast hits
to 13 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.68 0.31 -0.32
71 AT4G24650 isopentenyltransferase 4 ARABIDOPSIS THALIANA
ISOPENTENYLTRANSFERASE 4,
isopentenyltransferase 4		 0.68 0.3 -0.32
72 AT5G13150 exocyst subunit exo70 family protein C1 exocyst subunit exo70 family
protein C1, exocyst subunit exo70
family protein C1		 0.68 0.31 -0.3
73 AT3G51680 NAD(P)-binding Rossmann-fold superfamily protein AtSDR2, short-chain
dehydrogenase/reductase 2		 0.67 0.33 -0.3
74 AT4G14390 Ankyrin repeat family protein 0.67 0.33 -0.3
75 AT3G42390 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.67 0.32 -0.37
76 AT4G08970 transposable element gene -0.67 0.29 -0.31
77 AT1G70920 homeobox-leucine zipper protein 18 homeobox-leucine zipper protein
18, homeobox-leucine zipper
protein 18		 -0.67 0.3 -0.32
78 AT5G50480 nuclear factor Y, subunit C6 nuclear factor Y, subunit C6 0.67 0.31 -0.32
79 AT1G54140 TATA binding protein associated factor 21kDa subunit TBP-ASSOCIATED FACTOR 9, TATA
binding protein associated factor
21kDa subunit		 -0.67 0.3 -0.33
80 AT3G32100 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; Has 1 Blast hits to 1 proteins in 1 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.67 0.31 -0.3
81 AT5G51690 1-amino-cyclopropane-1-carboxylate synthase 12 1-amino-cyclopropane-1-carboxylate
synthase 12		 0.67 0.29 -0.31
82 AT2G48060 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: shoot, sperm cell;
CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF3595 (InterPro:IPR021999); Has 533 Blast hits to 341
proteins in 95 species: Archae - 2; Bacteria - 15; Metazoa
- 318; Fungi - 0; Plants - 93; Viruses - 0; Other
Eukaryotes - 105 (source: NCBI BLink).		 0.67 0.32 -0.31
83 AT5G49320 Protein of unknown function (DUF1218) 0.66 0.29 -0.32
84 AT5G38340 Disease resistance protein (TIR-NBS-LRR class) family 0.66 0.31 -0.32
85 AT3G51520 diacylglycerol acyltransferase family -0.66 0.33 -0.3
86 AT4G38680 glycine rich protein 2 ARABIDOPSIS THALIANA COLD SHOCK
PROTEIN 2, COLD SHOCK DOMAIN
PROTEIN 2, COLD SHOCK PROTEIN 2,
glycine rich protein 2		 -0.66 0.32 -0.33
87 AT3G44980 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G07215.1); Has 2 Blast hits to
2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.66 0.32 -0.33
88 AT3G44770 Protein of unknown function (DUF626) 0.66 0.32 -0.33
89 AT4G16444 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
CHD5-like protein (InterPro:IPR007514); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.66 0.29 -0.3
90 AT4G36160 NAC domain containing protein 76 NAC domain containing protein 76,
NAC domain containing protein 76,
VASCULAR-RELATED NAC-DOMAIN 2		 -0.66 0.31 -0.31
91 AT3G04420 NAC domain containing protein 48 NAC domain containing protein 48,
NAC domain containing protein 48		 0.66 0.31 -0.32
92 AT1G54110 Membrane fusion protein Use1 -0.66 0.3 -0.3
93 AT2G11360 transposable element gene 0.65 0.32 -0.34
94 AT5G17690 like heterochromatin protein (LHP1) AtLHP1, LIKE HETEROCHROMATIN
PROTEIN 1, TERMINAL FLOWER 2		 0.65 0.31 -0.33
95 AT2G17110 Protein of unknown function (DUF630 and DUF632) 0.65 0.32 -0.31
96 AT4G00420 Double-stranded RNA-binding domain (DsRBD)-containing
protein		 -0.65 0.32 -0.3
97 AT5G53635 F-box/RNI-like/FBD-like domains-containing protein 0.65 0.28 -0.3
98 AT4G10810 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G24026.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.65 0.31 -0.33
99 AT5G26700 RmlC-like cupins superfamily protein 0.65 0.31 -0.3
100 AT1G64450 Glycine-rich protein family 0.65 0.31 -0.32
101 AT3G54510 Early-responsive to dehydration stress protein (ERD4) 0.65 0.31 -0.32
102 AT3G49510 F-box family protein -0.65 0.31 -0.31
103 AT2G45930 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT4G16090.1); Has 161 Blast hits to
161 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 161; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.65 0.34 -0.33
104 AT2G06640 transposable element gene -0.65 0.31 -0.31
105 AT5G59290 UDP-glucuronic acid decarboxylase 3 ATUXS3, UDP-glucuronic acid
decarboxylase 3		 -0.65 0.3 -0.33
106 AT3G42530 transposable element gene 0.65 0.31 -0.32
107 AT5G27190 transposable element gene 0.65 0.3 -0.31
108 AT3G26870 Plant self-incompatibility protein S1 family 0.65 0.33 -0.34
109 AT3G47850 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 12 growth stages; Has 57 Blast hits to 57 proteins
in 32 species: Archae - 0; Bacteria - 5; Metazoa - 12;
Fungi - 4; Plants - 29; Viruses - 0; Other Eukaryotes - 7
(source: NCBI BLink).		 -0.65 0.3 -0.32
110 AT5G17720 alpha/beta-Hydrolases superfamily protein -0.64 0.28 -0.3
111 AT4G35170 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 -0.64 0.32 -0.33
112 AT5G46730 glycine-rich protein -0.64 0.34 -0.31
113 AT5G58180 Synaptobrevin family protein ATYKT62, YKT62 -0.64 0.31 -0.32
114 AT1G54790 GDSL-like Lipase/Acylhydrolase superfamily protein -0.64 0.32 -0.31
115 AT2G44610 Ras-related small GTP-binding family protein ATRAB6A, ATRABH1B, RAB6, RAB6A -0.64 0.33 -0.32
116 AT5G47150 YDG/SRA domain-containing protein -0.64 0.31 -0.32
117 AT3G12250 TGACG motif-binding factor 6 BZIP45, TGACG motif-binding factor
6		 -0.64 0.33 -0.3
118 AT3G04500 RNA-binding (RRM/RBD/RNP motifs) family protein -0.64 0.31 -0.32
119 AT5G35550 Duplicated homeodomain-like superfamily protein MYB DOMAIN PROTEIN 123, ATTT2, MYB
DOMAIN PROTEIN 123, TRANSPARENT
TESTA 2		 -0.64 0.3 -0.3
120 AT3G53690 RING/U-box superfamily protein -0.63 0.33 -0.31
121 AT2G32690 glycine-rich protein 23 GLYCINE-RICH PROTEIN 23,
glycine-rich protein 23		 -0.63 0.32 -0.29
122 AT5G36090 transposable element gene -0.63 0.32 -0.34
123 AT2G33220 GRIM-19 protein -0.63 0.33 -0.32
124 AT4G24580 Rho GTPase activation protein (RhoGAP) with PH domain ROP1 ENHANCER 1 -0.63 0.33 -0.3
125 AT3G28840 Protein of unknown function (DUF1216) -0.63 0.32 -0.35
126 AT5G39310 expansin A24 ATEXP24, expansin A24, ATHEXP
ALPHA 1.19, EXPANSIN 24, expansin
A24		 -0.62 0.31 -0.33
127 AT3G21400 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; EXPRESSED
IN: 22 plant structures; EXPRESSED DURING: 13 growth
stages; Has 29 Blast hits to 29 proteins in 12 species:
Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants -
27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.62 0.33 -0.33
128 AT3G05860 MADS-box transcription factor family protein -0.62 0.31 -0.31
129 AT5G45970 RAC-like 2 Arabidopsis RAC-like 2,
ARABIDOPSIS THALIANA RAC 2,
RHO-RELATED PROTEIN FROM PLANTS 7,
RAC-like 2, ROP7		 -0.61 0.32 -0.32
130 AT1G05330 unknown protein; Has 6 Blast hits to 6 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.61 0.31 -0.32
131 AT1G23570 Domain of unknown function (DUF220) -0.61 0.3 -0.32
132 AT1G20480 AMP-dependent synthetase and ligase family protein -0.61 0.31 -0.32
133 AT5G58280 AP2/B3-like transcriptional factor family protein -0.61 0.31 -0.31
134 AT4G05550 transposable element gene -0.61 0.32 -0.32
135 AT4G03770 transposable element gene -0.61 0.32 -0.33
136 AT3G29080 unknown protein; Has 0 Blast hits to 0 proteins in 0
species (source: NCBI BLink).		 -0.61 0.33 -0.31
137 AT4G25550 Cleavage/polyadenylation specificity factor, 25kDa subunit -0.61 0.31 -0.32
138 AT2G14830 Regulator of Vps4 activity in the MVB pathway protein -0.6 0.32 -0.33
139 AT5G21010 BTB-POZ and MATH domain 5 BTB-POZ AND MATH DOMAIN 5, BTB-POZ
and MATH domain 5		 -0.6 0.3 -0.31
140 AT1G26860 transposable element gene -0.6 0.31 -0.3
141 AT3G27930 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 14 growth stages; Has 35
Blast hits to 35 proteins in 12 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.6 0.32 -0.32
142 AT5G14890 NHL domain-containing protein -0.6 0.33 -0.32
143 AT2G25820 Integrase-type DNA-binding superfamily protein ethylene and salt inducible 2 -0.6 0.32 -0.35
144 AT1G03350 BSD domain-containing protein -0.59 0.31 -0.32
145 AT5G26140 Putative lysine decarboxylase family protein ATLOG9, LONELY GUY 9 -0.59 0.32 -0.33
146 AT1G05770 Mannose-binding lectin superfamily protein -0.59 0.3 -0.33
147 AT5G51700 protein binding;zinc ion binding ATRAR1, PPHB SUSCEPTIBLE 2,
Required for Mla12 resistance 1,
RPR2		 -0.59 0.34 -0.31
148 AT1G20400 Protein of unknown function (DUF1204) -0.59 0.32 -0.29
149 AT3G12203 serine carboxypeptidase-like 17 serine carboxypeptidase-like 17 -0.59 0.33 -0.32
150 AT2G26420 1-phosphatidylinositol-4-phosphate 5-kinase 3 1-phosphatidylinositol-4-phosphate
5-kinase 3		 -0.59 0.31 -0.31
151 AT1G09930 oligopeptide transporter 2 oligopeptide transporter 2,
oligopeptide transporter 2		 -0.59 0.32 -0.31
152 AT5G10090 Tetratricopeptide repeat (TPR)-like superfamily protein tetratricopeptide repeat 13 -0.59 0.31 -0.3