AT4G39960 : -
Query Information
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AGICode AT4G39960
Description Molecular chaperone Hsp40/DnaJ family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G39960 Molecular chaperone Hsp40/DnaJ family protein 1 0.33 -0.36
2 AT3G06980 DEA(D/H)-box RNA helicase family protein 0.91 0.33 -0.31
3 AT1G10510 RNI-like superfamily protein embryo defective 2004 0.89 0.31 -0.31
4 AT1G18090 5'-3' exonuclease family protein 0.89 0.34 -0.31
5 AT1G56050 GTP-binding protein-related 0.88 0.33 -0.32
6 AT4G16390 pentatricopeptide (PPR) repeat-containing protein suppressor of variegation 7 0.88 0.29 -0.34
7 AT5G08610 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 PIGMENT DEFECTIVE 340 0.87 0.31 -0.31
8 AT1G48650 DEA(D/H)-box RNA helicase family protein 0.87 0.32 -0.31
9 AT4G37510 Ribonuclease III family protein 0.87 0.33 -0.31
10 AT1G09900 Pentatricopeptide repeat (PPR-like) superfamily protein 0.87 0.29 -0.33
11 AT3G61770 Acid phosphatase/vanadium-dependent haloperoxidase-related
protein		 0.87 0.34 -0.32
12 AT2G37220 RNA-binding (RRM/RBD/RNP motifs) family protein 0.87 0.31 -0.31
13 AT5G07900 Mitochondrial transcription termination factor family
protein		 0.86 0.32 -0.32
14 AT3G57180 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 BRASSINAZOLE(BRZ) INSENSITIVE PALE
GREEN 2		 0.86 0.32 -0.3
15 AT2G14880 SWIB/MDM2 domain superfamily protein 0.86 0.32 -0.3
16 AT3G53460 chloroplast RNA-binding protein 29 chloroplast RNA-binding protein 29 0.86 0.32 -0.31
17 AT4G02990 Mitochondrial transcription termination factor family
protein		 BELAYA SMERT, RUGOSA 2 0.86 0.3 -0.34
18 AT1G48460 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast envelope; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G63040.1); Has 60 Blast hits to 60 proteins in 14
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 60; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.86 0.3 -0.32
19 AT5G55580 Mitochondrial transcription termination factor family
protein		 0.86 0.31 -0.3
20 AT5G46580 pentatricopeptide (PPR) repeat-containing protein 0.86 0.31 -0.33
21 AT2G36990 RNApolymerase sigma-subunit F SIGMA FACTOR 6, SIGMA FACTOR 6,
RNApolymerase sigma-subunit F,
SOLDAT8		 0.85 0.33 -0.29
22 AT5G49030 tRNA synthetase class I (I, L, M and V) family protein ovule abortion 2 0.85 0.29 -0.31
23 AT5G64580 AAA-type ATPase family protein EMBRYO DEFECTIVE 3144 0.85 0.33 -0.31
24 AT4G25990 CCT motif family protein CIL 0.85 0.3 -0.31
25 AT2G39670 Radical SAM superfamily protein 0.85 0.31 -0.31
26 AT3G13470 TCP-1/cpn60 chaperonin family protein chaperonin-60beta2 0.85 0.31 -0.34
27 AT2G24120 DNA/RNA polymerases superfamily protein PIGMENT DEFECTIVE 319, SCABRA 3 0.84 0.33 -0.32
28 AT5G63420 RNA-metabolising metallo-beta-lactamase family protein embryo defective 2746 0.84 0.33 -0.33
29 AT5G48220 Aldolase-type TIM barrel family protein 0.84 0.32 -0.32
30 AT3G04650 FAD/NAD(P)-binding oxidoreductase family protein 0.84 0.29 -0.3
31 AT4G00370 Major facilitator superfamily protein ANTR2, anion transporter 2 0.84 0.32 -0.32
32 AT4G02510 translocon at the outer envelope membrane of chloroplasts
159		 ATTOC159, PLASTID PROTEIN IMPORT
2, translocon at the outer
envelope membrane of chloroplasts
159, TRANSLOCON AT THE OUTER
ENVELOPE MEMBRANE OF CHLOROPLASTS
160, TRANSLOCON AT THE OUTER
ENVELOPE MEMBRANE OF CHLOROPLASTS
86		 0.84 0.31 -0.31
33 AT1G63680 acid-amino acid ligases;ligases;ATP binding;ATP
binding;ligases		 ALBINO OR PALE-GREEN 13, ATMURE,
MURE, PIGMENT DEFECTIVE EMBRYO 316		 0.84 0.34 -0.32
34 AT4G36390 Methylthiotransferase 0.83 0.32 -0.31
35 AT5G42480 Chaperone DnaJ-domain superfamily protein ACCUMULATION AND REPLICATION OF
CHLOROPLASTS 6		 0.83 0.32 -0.29
36 AT3G51870 Mitochondrial substrate carrier family protein 0.83 0.32 -0.32
37 AT3G56680 Single-stranded nucleic acid binding R3H protein 0.83 0.3 -0.33
38 AT4G34740 GLN phosphoribosyl pyrophosphate amidotransferase 2 GLN phosphoribosyl pyrophosphate
amidotransferase 2, GLN
phosphoribosyl pyrophosphate
amidotransferase 2, ATPURF2,
CHLOROPLAST IMPORT APPARATUS 1		 0.83 0.32 -0.32
39 AT1G51570 Calcium-dependent lipid-binding (CaLB domain) plant
phosphoribosyltransferase family protein		 0.83 0.32 -0.31
40 AT5G18570 GTP1/OBG family protein ATOBGC, OBG-like protein,
chloroplastic SAR1, EMBRYO
DEFECTIVE 269, EMBRYO DEFECTIVE
3138		 0.83 0.33 -0.28
41 AT5G12860 dicarboxylate transporter 1 dicarboxylate transporter 1 0.82 0.32 -0.29
42 AT3G49670 Leucine-rich receptor-like protein kinase family protein BARELY ANY MERISTEM 2 0.82 0.31 -0.34
43 AT4G19710 aspartate kinase-homoserine dehydrogenase ii ASPARTATE KINASE-HOMOSERINE
DEHYDROGENASE, aspartate
kinase-homoserine dehydrogenase ii		 0.82 0.33 -0.31
44 AT2G31840 Thioredoxin superfamily protein Mesophyll-cell RNAi Library line
7-like		 0.81 0.31 -0.31
45 AT5G42310 Pentatricopeptide repeat (PPR-like) superfamily protein 0.81 0.3 -0.29
46 AT4G32420 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family
protein		 0.81 0.31 -0.33
47 AT3G02250 O-fucosyltransferase family protein 0.81 0.31 -0.29
48 AT3G46740 translocon at the outer envelope membrane of chloroplasts
75-III		 MODIFIER OF ARG1 1, translocon at
the outer envelope membrane of
chloroplasts 75-III		 0.81 0.34 -0.33
49 AT5G23070 Thymidine kinase 0.81 0.32 -0.32
50 AT2G18940 Tetratricopeptide repeat (TPR)-like superfamily protein 0.8 0.34 -0.29
51 AT5G08415 Radical SAM superfamily protein 0.8 0.31 -0.31
52 AT3G04550 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN:
22 plant structures; EXPRESSED DURING: 13 growth stages;
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G28500.1); Has 110 Blast hits to 110 proteins in
51 species: Archae - 0; Bacteria - 67; Metazoa - 1; Fungi -
0; Plants - 41; Viruses - 0; Other Eukaryotes - 1 (source:
NCBI BLink).		 0.8 0.32 -0.33
53 AT1G80770 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 pigment defective 318 0.8 0.33 -0.31
54 AT1G60950 2Fe-2S ferredoxin-like superfamily protein FERREDOXIN 2, FED A 0.8 0.32 -0.34
55 AT3G19220 protein disulfide isomerases SHI-YO-U MEANS COTYLEDON IN
JAPANESE, SNOWY COTYLEDON 2		 0.8 0.33 -0.3
56 AT2G04270 RNAse E/G-like RNAse E/G-like 0.8 0.29 -0.31
57 AT5G55280 homolog of bacterial cytokinesis Z-ring protein FTSZ 1-1 ARABIDOPSIS THALIANA HOMOLOG OF
BACTERIAL CYTOKINESIS Z-RING
PROTEIN FTSZ 1-1, CHLOROPLAST
FTSZ, homolog of bacterial
cytokinesis Z-ring protein FTSZ
1-1		 0.8 0.31 -0.3
58 AT2G43630 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast
thylakoid membrane, chloroplast, nucleus, chloroplast
envelope; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: glycine-rich protein (TAIR:AT3G59640.2); Has 67
Blast hits to 67 proteins in 20 species: Archae - 0;
Bacteria - 4; Metazoa - 9; Fungi - 1; Plants - 49; Viruses
- 2; Other Eukaryotes - 2 (source: NCBI BLink).		 0.79 0.31 -0.31
59 AT1G79560 FTSH protease 12 EMBRYO DEFECTIVE 1047, EMBRYO
DEFECTIVE 156, EMBRYO DEFECTIVE
36, FTSH protease 12		 0.79 0.3 -0.34
60 AT5G08400 Protein of unknown function (DUF3531) 0.79 0.31 -0.33
61 AT4G02920 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G03340.1); Has 41 Blast hits
to 41 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.79 0.31 -0.32
62 AT4G30000 Dihydropterin pyrophosphokinase / Dihydropteroate synthase 0.79 0.31 -0.32
63 AT1G24440 RING/U-box superfamily protein -0.76 0.31 -0.3
64 AT1G18260 HCP-like superfamily protein EMS-mutagenized bri1 suppressor 5,
HRD3A		 -0.75 0.31 -0.32
65 AT1G19310 RING/U-box superfamily protein -0.73 0.32 -0.33
66 AT2G40110 Yippee family putative zinc-binding protein -0.72 0.3 -0.31
67 AT3G10260 Reticulon family protein -0.7 0.32 -0.32
68 AT2G22690 zinc ion binding -0.69 0.31 -0.3
69 AT1G73500 MAP kinase kinase 9 ATMKK9, MAP kinase kinase 9 -0.68 0.32 -0.29
70 AT2G25280 CONTAINS InterPro DOMAIN/s: UPF0103/Mediator of
ErbB2-driven cell motility (Memo), related
(InterPro:IPR002737); Has 1074 Blast hits to 1072 proteins
in 474 species: Archae - 213; Bacteria - 366; Metazoa -
159; Fungi - 135; Plants - 54; Viruses - 0; Other
Eukaryotes - 147 (source: NCBI BLink).		 -0.68 0.32 -0.3
71 AT3G23570 alpha/beta-Hydrolases superfamily protein -0.67 0.31 -0.32
72 AT2G15230 lipase 1 lipase 1, lipase 1 -0.67 0.31 -0.33
73 AT5G64240 metacaspase 3 metacaspase 3, metacaspase 1a,
metacaspase 3, metacaspase 1a		 -0.67 0.3 -0.32
74 AT5G18170 glutamate dehydrogenase 1 glutamate dehydrogenase 1 -0.66 0.33 -0.31
75 AT1G69510 cAMP-regulated phosphoprotein 19-related protein -0.66 0.31 -0.31
76 AT1G77420 alpha/beta-Hydrolases superfamily protein -0.66 0.32 -0.32
77 AT3G02340 RING/U-box superfamily protein -0.65 0.31 -0.32
78 AT4G11360 RING-H2 finger A1B RING-H2 finger A1B -0.65 0.29 -0.31
79 AT1G62660 Glycosyl hydrolases family 32 protein -0.65 0.31 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
80 C0134 Kaempferol-7-O-neohesperidoside - - - 0.8 0.44 -0.46
81 C0120 Isocitric acid - Isocitrate TCA cycle variation V (plant),
TCA cycle variation III (eukaryotic),
glutamine biosynthesis III,
glyoxylate cycle 		-0.78 0.42 -0.48 C0120