AT4G40090 : arabinogalactan protein 3
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT4G40090
Description arabinogalactan protein 3
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G40090 arabinogalactan protein 3 arabinogalactan protein 3 1 0.33 -0.31
2 AT5G06630 proline-rich extensin-like family protein 0.89 0.32 -0.32
3 AT5G67400 root hair specific 19 root hair specific 19 0.87 0.3 -0.32
4 AT5G22410 root hair specific 18 root hair specific 18 0.86 0.3 -0.33
5 AT3G10710 root hair specific 12 root hair specific 12 0.85 0.31 -0.29
6 AT1G54970 proline-rich protein 1 proline-rich protein 1,
proline-rich protein 1, ROOT HAIR
SPECIFIC 7		 0.85 0.31 -0.31
7 AT4G25790 CAP (Cysteine-rich secretory proteins, Antigen 5, and
Pathogenesis-related 1 protein) superfamily protein		 0.84 0.32 -0.32
8 AT3G54590 hydroxyproline-rich glycoprotein hydroxyproline-rich glycoprotein,
hydroxyproline-rich glycoprotein		 0.83 0.31 -0.33
9 AT5G06640 Proline-rich extensin-like family protein extensin 10 0.83 0.33 -0.31
10 AT3G49960 Peroxidase superfamily protein 0.83 0.32 -0.3
11 AT2G24980 Proline-rich extensin-like family protein extensin 6 0.82 0.33 -0.3
12 AT1G30870 Peroxidase superfamily protein 0.81 0.34 -0.3
13 AT5G04960 Plant invertase/pectin methylesterase inhibitor superfamily 0.8 0.32 -0.32
14 AT1G34510 Peroxidase superfamily protein 0.79 0.34 -0.29
15 AT4G30670 Putative membrane lipoprotein 0.79 0.32 -0.32
16 AT5G49270 COBRA-like extracellular glycosyl-phosphatidyl
inositol-anchored protein family		 COBRA-LIKE 9, DEFORMED ROOT HAIRS
9, MUTANT ROOT HAIR 4, SHAVEN 2		 0.78 0.31 -0.33
17 AT4G26010 Peroxidase superfamily protein 0.78 0.31 -0.3
18 AT4G25220 root hair specific 15 glycerol-3-phosphate permease 2,
glycerol-3-phosphate permease 2,
root hair specific 15		 0.77 0.32 -0.31
19 AT2G20520 FASCICLIN-like arabinogalactan 6 FASCICLIN-like arabinogalactan 6 0.77 0.32 -0.32
20 AT4G02270 root hair specific 13 root hair specific 13 0.77 0.3 -0.33
21 AT1G01750 actin depolymerizing factor 11 actin depolymerizing factor 11 0.77 0.33 -0.34
22 AT5G61350 Protein kinase superfamily protein 0.76 0.32 -0.32
23 AT1G48930 glycosyl hydrolase 9C1 glycosyl hydrolase 9C1, glycosyl
hydrolase 9C1		 0.76 0.31 -0.33
24 AT1G33800 Protein of unknown function (DUF579) 0.76 0.32 -0.32
25 AT5G44610 microtubule-associated protein 18 microtubule-associated protein 18,
PLASMA MEMBRANE ASSOCIATED
CA2+-BINDING PROTEIN-2		 0.76 0.31 -0.31
26 AT5G24313 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 0.76 0.3 -0.34
27 AT4G28850 xyloglucan endotransglucosylase/hydrolase 26 ATXTH26, xyloglucan
endotransglucosylase/hydrolase 26		 0.75 0.3 -0.31
28 AT2G19590 ACC oxidase 1 ACC oxidase 1, ATACO1 0.75 0.31 -0.3
29 AT1G01780 GATA type zinc finger transcription factor family protein PLIM2b 0.74 0.35 -0.3
30 AT5G01610 Protein of unknown function, DUF538 0.74 0.32 -0.32
31 AT2G47540 Pollen Ole e 1 allergen and extensin family protein 0.74 0.32 -0.32
32 AT4G27400 Late embryogenesis abundant (LEA) protein-related 0.74 0.33 -0.34
33 AT5G05500 Pollen Ole e 1 allergen and extensin family protein MOP10 0.73 0.3 -0.32
34 AT4G00680 actin depolymerizing factor 8 actin depolymerizing factor 8 0.73 0.33 -0.32
35 AT1G33700 Beta-glucosidase, GBA2 type family protein 0.73 0.34 -0.33
36 AT5G58010 LJRHL1-like 3 LJRHL1-like 3 0.73 0.31 -0.34
37 AT1G04610 YUCCA 3 YUCCA 3 0.73 0.31 -0.35
38 AT5G17820 Peroxidase superfamily protein 0.72 0.3 -0.31
39 AT2G25240 Serine protease inhibitor (SERPIN) family protein 0.72 0.33 -0.31
40 AT1G12560 expansin A7 ATEXP7, expansin A7, ATHEXP ALPHA
1.26, EXP7, expansin A7		 0.72 0.32 -0.29
41 AT5G40510 Sucrase/ferredoxin-like family protein 0.72 0.32 -0.32
42 AT1G72850 Disease resistance protein (TIR-NBS class) 0.71 0.3 -0.32
43 AT4G25820 xyloglucan endotransglucosylase/hydrolase 14 ATXTH14, xyloglucan
endotransglucosylase/hydrolase 14,
xyloglucan endotransglycosylase 9		 0.71 0.32 -0.33
44 AT2G45750 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.7 0.3 -0.3
45 AT5G58750 NAD(P)-binding Rossmann-fold superfamily protein 0.7 0.34 -0.32
46 AT3G05920 Heavy metal transport/detoxification superfamily protein 0.7 0.3 -0.34
47 AT4G08410 Proline-rich extensin-like family protein 0.7 0.3 -0.33
48 AT3G12540 Protein of unknown function, DUF547 0.7 0.3 -0.32
49 AT5G13910 Integrase-type DNA-binding superfamily protein LEAFY PETIOLE 0.69 0.33 -0.32
50 AT1G12950 root hair specific 2 root hair specific 2 0.69 0.3 -0.33
51 AT2G41070 Basic-leucine zipper (bZIP) transcription factor family
protein		 ATBZIP12, DPBF4, ENHANCED EM LEVEL 0.69 0.32 -0.32
52 AT3G01730 unknown protein; Has 8 Blast hits to 8 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 8; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.68 0.33 -0.29
53 AT2G34300 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.68 0.3 -0.31
54 AT4G33800 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.68 0.3 -0.32
55 AT3G54040 PAR1 protein 0.68 0.34 -0.32
56 AT3G55720 Protein of unknown function (DUF620) 0.68 0.32 -0.31
57 AT3G07070 Protein kinase superfamily protein 0.68 0.31 -0.33
58 AT5G57540 xyloglucan endotransglucosylase/hydrolase 13 AtXTH13, xyloglucan
endotransglucosylase/hydrolase 13		 0.68 0.33 -0.33
59 AT5G11060 KNOTTED1-like homeobox gene 4 KNOTTED1-like homeobox gene 4 -0.67 0.31 -0.31
60 AT4G19680 iron regulated transporter 2 IRON REGULATED TRANSPORTER 2, iron
regulated transporter 2		 0.67 0.31 -0.32
61 AT3G43190 sucrose synthase 4 ARABIDOPSIS THALIANA SUCROSE
SYNTHASE 4, sucrose synthase 4		 0.67 0.31 -0.32
62 AT2G46860 pyrophosphorylase 3 pyrophosphorylase 3,
pyrophosphorylase 3		 0.67 0.32 -0.31
63 AT3G21510 histidine-containing phosphotransmitter 1 histidine-containing
phosphotransmitter 1		 0.67 0.33 -0.31
64 AT4G27290 S-locus lectin protein kinase family protein 0.67 0.32 -0.29
65 AT4G11610 C2 calcium/lipid-binding plant phosphoribosyltransferase
family protein		 0.66 0.3 -0.33
66 AT1G27740 root hair defective 6-like 4 root hair defective 6-like 4 0.66 0.32 -0.32
67 AT5G10280 myb domain protein 92 ATMYB64, myb domain protein 92,
myb domain protein 92		 0.66 0.31 -0.32
68 AT5G10530 Concanavalin A-like lectin protein kinase family protein -0.66 0.3 -0.32
69 AT3G09280 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: root; Has 31 Blast hits
to 31 proteins in 9 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.65 0.32 -0.31
70 AT3G60330 H(+)-ATPase 7 H(+)-ATPase 7, H(+)-ATPase 7 0.65 0.32 -0.33
71 AT4G33560 Wound-responsive family protein 0.65 0.31 -0.3
72 AT3G12600 nudix hydrolase homolog 16 nudix hydrolase homolog 16, nudix
hydrolase homolog 16		 0.65 0.28 -0.32
73 AT3G08980 Peptidase S24/S26A/S26B/S26C family protein 0.65 0.33 -0.31
74 AT1G62980 expansin A18 ATEXP18, expansin A18, ATHEXP
ALPHA 1.25, EXPANSIN 18, expansin
A18		 0.65 0.32 -0.32
75 AT1G73700 MATE efflux family protein -0.64 0.3 -0.34
76 AT2G34910 BEST Arabidopsis thaliana protein match is: root hair
specific 4 (TAIR:AT1G30850.1); Has 43 Blast hits to 43
proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.64 0.32 -0.32
77 AT1G75620 glyoxal oxidase-related protein 0.64 0.33 -0.3
78 AT2G41970 Protein kinase superfamily protein 0.64 0.32 -0.3
79 AT3G07130 purple acid phosphatase 15 PURPLE ACID PHOSPHATASE 15, purple
acid phosphatase 15		 0.64 0.32 -0.32
80 AT1G71010 FORMS APLOID AND BINUCLEATE CELLS 1C FORMS APLOID AND BINUCLEATE CELLS
1C		 0.64 0.31 -0.31
81 AT2G28440 proline-rich family protein 0.63 0.32 -0.31
82 AT5G01880 RING/U-box superfamily protein -0.63 0.31 -0.32
83 AT1G75540 salt tolerance homolog2 B BOX 21, B-box domain protein 21,
long hypocotyl under shade, salt
tolerance homolog2		 0.63 0.31 -0.31
84 AT1G50060 CAP (Cysteine-rich secretory proteins, Antigen 5, and
Pathogenesis-related 1 protein) superfamily protein		 0.63 0.32 -0.31
85 AT1G69240 methyl esterase 15 ARABIDOPSIS THALIANA METHYL
ESTERASE 15, methyl esterase 15,
ROOT HAIR SPECIFIC 9		 0.63 0.31 -0.31
86 AT2G45050 GATA transcription factor 2 GATA transcription factor 2 0.63 0.31 -0.31
87 AT4G25160 U-box domain-containing protein kinase family protein 0.62 0.33 -0.33
88 AT5G53460 NADH-dependent glutamate synthase 1 NADH-dependent glutamate synthase
1		 0.62 0.31 -0.33
89 AT5G35190 proline-rich extensin-like family protein extensin 13 0.62 0.29 -0.32
90 AT2G17850 Rhodanese/Cell cycle control phosphatase superfamily
protein		 0.62 0.32 -0.3
91 AT4G14980 Cysteine/Histidine-rich C1 domain family protein 0.62 0.29 -0.33
92 AT1G11920 Pectin lyase-like superfamily protein 0.62 0.34 -0.32
93 AT1G12040 leucine-rich repeat/extensin 1 leucine-rich repeat/extensin 1 0.61 0.3 -0.34
94 AT2G44110 Seven transmembrane MLO family protein MILDEW RESISTANCE LOCUS O 15,
MILDEW RESISTANCE LOCUS O 15		 0.61 0.31 -0.31
95 AT2G07020 Protein kinase protein with adenine nucleotide alpha
hydrolases-like domain		 -0.61 0.32 -0.31
96 AT3G56710 sigma factor binding protein 1 sigma factor binding protein 1 -0.61 0.32 -0.3
97 AT3G44080 F-box family protein -0.61 0.32 -0.29
98 AT1G29270 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G40435.1); Has 98 Blast hits
to 98 proteins in 15 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.61 0.32 -0.35
99 AT3G49700 1-aminocyclopropane-1-carboxylate synthase 9 1-aminocyclopropane-1-carboxylate
synthase 9, AtACS9, ETHYLENE
OVERPRODUCING 3		 0.61 0.33 -0.3
100 AT1G62440 leucine-rich repeat/extensin 2 leucine-rich repeat/extensin 2 0.61 0.32 -0.33
101 AT5G61550 U-box domain-containing protein kinase family protein 0.61 0.32 -0.32
102 AT5G63650 SNF1-related protein kinase 2.5 SNRK2-5, SNF1-related protein
kinase 2.5, SNF1-RELATED PROTEIN
KINASE 2H		 0.61 0.35 -0.3
103 AT3G60190 DYNAMIN-like 1E DYNAMIN-like 1E, ARABIDOPSIS
DYNAMIN-LIKE 4, DYNAMIN-LIKE
PROTEIN 2, DYNAMIN-like 1E,
DYNAMIN-RELATED PROTEIN 1E,
ENHANCED DISEASE RESISTANCE 3		 -0.6 0.33 -0.32
104 AT2G42860 unknown protein; Has 446 Blast hits to 326 proteins in 94
species: Archae - 0; Bacteria - 32; Metazoa - 113; Fungi -
93; Plants - 21; Viruses - 4; Other Eukaryotes - 183
(source: NCBI BLink).		 -0.6 0.32 -0.32
105 AT2G32430 Galactosyltransferase family protein -0.6 0.31 -0.31
106 AT1G19630 cytochrome P450, family 722, subfamily A, polypeptide 1 cytochrome P450, family 722,
subfamily A, polypeptide 1		 -0.6 0.33 -0.3
107 AT1G51700 DOF zinc finger protein 1 DOF zinc finger protein 1, DOF
zinc finger protein 1		 -0.6 0.33 -0.31
108 AT2G17650 AMP-dependent synthetase and ligase family protein -0.59 0.32 -0.3
109 AT3G30220 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G43150.1); Has 30 Blast hits
to 30 proteins in 3 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.59 0.33 -0.3
110 AT1G75030 thaumatin-like protein 3 thaumatin-like protein 3,
thaumatin-like protein 3		 -0.59 0.31 -0.34
111 AT5G45850 Protein of unknown function (DUF688) -0.59 0.29 -0.33
112 AT1G28610 GDSL-like Lipase/Acylhydrolase superfamily protein -0.58 0.3 -0.31
113 AT2G16070 plastid division2 PLASTID DIVISION2 -0.58 0.3 -0.32
114 AT2G14230 transposable element gene -0.58 0.31 -0.31
115 AT3G48650 pseudogene, At14a-related protein, similar to At14a
(GI:11994571 and GI:11994573) (Arabidopsis thaliana)		 -0.56 0.31 -0.32
116 AT1G07280 Tetratricopeptide repeat (TPR)-like superfamily protein -0.56 0.29 -0.29
117 AT4G09490 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 -0.56 0.3 -0.29
118 AT3G42250 transposable element gene -0.56 0.32 -0.32
119 AT5G02800 Protein kinase superfamily protein CDG1-like 1 -0.56 0.28 -0.3
120 AT3G62740 beta glucosidase 7 beta glucosidase 7 -0.55 0.33 -0.31
121 AT3G13640 RNAse l inhibitor protein 1 ATP-binding cassette E1, RNAse l
inhibitor protein 1, RNAse l
inhibitor protein 1		 -0.55 0.3 -0.3
122 AT1G51670 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G48180.1); Has 37 Blast hits
to 37 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.55 0.32 -0.32
123 AT5G60900 receptor-like protein kinase 1 receptor-like protein kinase 1 -0.55 0.32 -0.31
124 AT2G11235 transposable element gene -0.55 0.33 -0.31
125 AT3G54140 peptide transporter 1 ARABIDOPSIS THALIANA PEPTIDE
TRANSPORTER 1, peptide transporter
1		 -0.54 0.32 -0.34
126 AT5G37980 Zinc-binding dehydrogenase family protein -0.54 0.33 -0.33
127 AT3G06160 AP2/B3-like transcriptional factor family protein -0.54 0.31 -0.3
128 AT1G02190 Fatty acid hydroxylase superfamily -0.54 0.3 -0.29
129 AT1G19780 cyclic nucleotide gated channel 8 cyclic nucleotide gated channel
8, CNGC8, cyclic nucleotide gated
channel 8		 -0.54 0.31 -0.31
130 AT3G60420 Phosphoglycerate mutase family protein -0.53 0.31 -0.31
131 AT4G33925 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 suppressor of sni1 2 -0.53 0.31 -0.32
132 AT5G64800 CLAVATA3/ESR-RELATED 21 CLAVATA3/ESR-RELATED 21 -0.53 0.32 -0.33
133 AT3G27785 myb domain protein 118 ATMYB118, myb domain protein 118,
PLANT GROWTH ACTIVATOR 37		 -0.53 0.32 -0.32
134 AT1G09610 Protein of unknown function (DUF579) -0.53 0.32 -0.32
135 AT4G23220 cysteine-rich RLK (RECEPTOR-like protein kinase) 14 cysteine-rich RLK (RECEPTOR-like
protein kinase) 14		 -0.53 0.34 -0.34
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
136 C0182 MST_2996.4 - - - -0.76 0.45 -0.44