AT4G39880 : -
Query Information
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AGICode AT4G39880
Description Ribosomal protein L23/L15e family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G39880 Ribosomal protein L23/L15e family protein 1 0.33 -0.31
2 AT1G18630 glycine-rich RNA-binding protein 6 glycine-rich RNA-binding protein 6 0.86 0.35 -0.32
3 AT1G27970 nuclear transport factor 2B nuclear transport factor 2B 0.86 0.34 -0.31
4 AT1G03860 prohibitin 2 prohibitin 2, prohibitin 2 0.85 0.32 -0.31
5 AT5G15090 voltage dependent anion channel 3 ARABIDOPSIS THALIANA VOLTAGE
DEPENDENT ANION CHANNEL 3, voltage
dependent anion channel 3		 0.82 0.31 -0.34
6 AT5G64300 GTP cyclohydrolase II ARABIDOPSIS THALIANA GTP
CYCLOHYDROLASE II, Arabidopsis
thaliana riboflavin A1, GTP
cyclohydrolase II, RED FLUORESCENT
IN DARKNESS 1, riboflavin A1		 0.81 0.29 -0.31
7 AT2G27020 20S proteasome alpha subunit G1 20S proteasome alpha subunit G1 0.81 0.31 -0.3
8 AT5G05370 Cytochrome b-c1 complex, subunit 8 protein 0.81 0.33 -0.29
9 AT5G61240 Leucine-rich repeat (LRR) family protein 0.81 0.32 -0.31
10 AT3G13930 Dihydrolipoamide acetyltransferase, long form protein 0.81 0.3 -0.32
11 AT4G31300 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
superfamily protein		 PBA1 0.8 0.31 -0.34
12 AT1G21720 proteasome beta subunit C1 proteasome beta subunit C1 0.8 0.3 -0.32
13 AT1G66580 senescence associated gene 24 ribosomal protein L10 C,
senescence associated gene 24		 0.79 0.31 -0.31
14 AT4G24920 secE/sec61-gamma protein transport protein 0.79 0.32 -0.29
15 AT5G61790 calnexin 1 ATCNX1, calnexin 1 0.78 0.31 -0.31
16 AT3G51260 20S proteasome alpha subunit PAD1 20S proteasome alpha subunit PAD1 0.78 0.33 -0.29
17 AT2G45070 Preprotein translocase Sec, Sec61-beta subunit protein SUPPRESSORS OF SECRETION-DEFECTIVE
61 BETA		 0.78 0.31 -0.31
18 AT5G65430 general regulatory factor 8 14-3-3 PROTEIN G-BOX FACTOR14
KAPPA, GF14 KAPPA, general
regulatory factor 8		 0.78 0.32 -0.33
19 AT5G64130 cAMP-regulated phosphoprotein 19-related protein 0.78 0.3 -0.31
20 AT3G01800 Ribosome recycling factor 0.78 0.32 -0.31
21 AT1G67250 Proteasome maturation factor UMP1 0.78 0.3 -0.32
22 AT1G77440 20S proteasome beta subunit C2 20S proteasome beta subunit C2 0.78 0.32 -0.32
23 AT4G39150 DNAJ heat shock N-terminal domain-containing protein 0.78 0.31 -0.31
24 AT3G60820 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
superfamily protein		 PBF1 0.78 0.3 -0.31
25 AT4G31080 Protein of unknown function (DUF2296) 0.76 0.33 -0.32
26 AT5G66140 proteasome alpha subunit D2 proteasome alpha subunit D2 0.76 0.31 -0.33
27 AT1G36050 Endoplasmic reticulum vesicle transporter protein 0.76 0.3 -0.34
28 AT5G65270 RAB GTPase homolog A4A RAB GTPase homolog A4A, RAB GTPase
homolog A4A		 0.76 0.31 -0.33
29 AT1G01910 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.76 0.28 -0.32
30 AT4G14800 20S proteasome beta subunit D2 20S proteasome beta subunit D2 0.76 0.32 -0.31
31 AT2G20760 Clathrin light chain protein 0.76 0.34 -0.3
32 AT1G54220 Dihydrolipoamide acetyltransferase, long form protein 0.76 0.33 -0.31
33 AT2G38360 prenylated RAB acceptor 1.B4 prenylated RAB acceptor 1.B4 0.75 0.31 -0.33
34 AT3G10050 L-O-methylthreonine resistant 1 L-O-methylthreonine resistant 1 0.75 0.31 -0.32
35 AT3G17910 Surfeit locus 1 cytochrome c oxidase biogenesis protein EMBRYO DEFECTIVE 3121, SURFEIT 1 0.75 0.34 -0.33
36 AT2G38310 PYR1-like 4 PYR1-like 4, regulatory components
of ABA receptor 10		 0.75 0.28 -0.32
37 AT4G29520 LOCATED IN: endoplasmic reticulum, plasma membrane;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14
growth stages; CONTAINS InterPro DOMAIN/s: Saposin B
(InterPro:IPR008139); Has 137 Blast hits to 137 proteins in
50 species: Archae - 2; Bacteria - 0; Metazoa - 41; Fungi -
10; Plants - 36; Viruses - 0; Other Eukaryotes - 48
(source: NCBI BLink).		 0.75 0.31 -0.31
38 AT2G18030 Peptide methionine sulfoxide reductase family protein 0.75 0.31 -0.33
39 AT1G26750 unknown protein; Has 44 Blast hits to 44 proteins in 16
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.75 0.32 -0.32
40 AT5G01520 RING/U-box superfamily protein ABA Insensitive RING Protein 2,
AtAIRP2		 -0.75 0.32 -0.33
41 AT5G47320 ribosomal protein S19 ribosomal protein S19 0.75 0.31 -0.32
42 AT5G27395 Mitochondrial inner membrane translocase complex, subunit
Tim44-related protein		 0.75 0.32 -0.3
43 AT4G31080 Protein of unknown function (DUF2296) 0.75 0.35 -0.31
44 AT3G05530 regulatory particle triple-A ATPase 5A ATS6A.2, regulatory particle
triple-A ATPase 5A		 0.75 0.31 -0.33
45 AT1G30630 Coatomer epsilon subunit 0.74 0.32 -0.3
46 AT1G28510 Optic atrophy 3 protein (OPA3) 0.74 0.32 -0.3
47 AT3G47930 L-galactono-1,4-lactone dehydrogenase L-galactono-1,4-lactone
dehydrogenase,
L-galactono-1,4-lactone
dehydrogenase		 0.74 0.3 -0.31
48 AT4G24330 Protein of unknown function (DUF1682) 0.74 0.33 -0.32
49 AT4G12590 Protein of unknown function DUF106, transmembrane 0.74 0.32 -0.32
50 AT5G10350 RNA-binding (RRM/RBD/RNP motifs) family protein 0.74 0.31 -0.32
51 AT4G03120 C2H2 and C2HC zinc fingers superfamily protein 0.74 0.28 -0.31
52 AT2G19810 CCCH-type zinc finger family protein AtOZF1, Oxidation-related Zinc
Finger 1		 -0.74 0.33 -0.3
53 AT1G08040 Protein of unknown function (DUF707) -0.74 0.32 -0.31
54 AT1G56330 secretion-associated RAS 1B SECRETION-ASSOCIATED RAS 1,
secretion-associated RAS 1B,
ARABIDOPSIS THALIANA
SECRETION-ASSOCIATED RAS 1B,
SECRETION-ASSOCIATED RAS 1,
secretion-associated RAS 1B		 0.74 0.3 -0.33
55 AT5G50850 Transketolase family protein MACCI-BOU 0.74 0.32 -0.31
56 AT3G48140 B12D protein 0.74 0.35 -0.32
57 AT1G29310 SecY protein transport family protein 0.74 0.3 -0.34
58 AT5G48030 gametophytic factor 2 gametophytic factor 2 0.73 0.29 -0.3
59 AT1G09210 calreticulin 1b AtCRT1b, calreticulin 1b 0.73 0.3 -0.32
60 AT5G13780 Acyl-CoA N-acyltransferases (NAT) superfamily protein 0.73 0.32 -0.32
61 AT5G14030 translocon-associated protein beta (TRAPB) family protein 0.73 0.33 -0.3
62 AT1G49500 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 19 plant structures;
EXPRESSED DURING: 10 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G19030.1); Has 24 Blast hits to 24 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.73 0.3 -0.32
63 AT1G03150 Acyl-CoA N-acyltransferases (NAT) superfamily protein 0.73 0.32 -0.33
64 AT3G04090 small and basic intrinsic protein 1A SIP1;1, small and basic intrinsic
protein 1A		 0.73 0.32 -0.31
65 AT4G34720 ATPase, F0/V0 complex, subunit C protein ATVHA-C1, AVA-P1, VACUOLAR
H+-PUMPING ATPASE C1		 0.72 0.32 -0.32
66 AT3G52390 TatD related DNase 0.72 0.3 -0.32
67 AT5G40810 Cytochrome C1 family 0.72 0.33 -0.35
68 AT1G62380 ACC oxidase 2 ACC oxidase 2, ATACO2 0.72 0.31 -0.33
69 AT2G30970 aspartate aminotransferase 1 aspartate aminotransferase 1 0.72 0.3 -0.29
70 AT4G02580 NADH-ubiquinone oxidoreductase 24 kDa subunit, putative 0.72 0.31 -0.32
71 AT2G40730 Protein kinase family protein with ARM repeat domain cytoplasmic tRNA export protein 0.72 0.33 -0.31
72 AT1G11890 Synaptobrevin family protein SECRETION 22, SECRETION 22 0.72 0.33 -0.33
73 AT4G38510 ATPase, V1 complex, subunit B protein 0.72 0.32 -0.3
74 AT5G26860 lon protease 1 lon protease 1, LON_ARA_ARA 0.72 0.32 -0.32
75 AT1G51350 ARM repeat superfamily protein 0.72 0.3 -0.32
76 AT1G02140 mago nashi family protein HAPLESS 1, MAGO NASHI, MATERNAL
EFFECT EMBRYO ARREST 63		 0.72 0.29 -0.33
77 AT1G53240 Lactate/malate dehydrogenase family protein mitochondrial malate dehydrogenase
1		 0.72 0.32 -0.31
78 AT5G58240 FRAGILE HISTIDINE TRIAD FRAGILE HISTIDINE TRIAD 0.71 0.3 -0.34
79 AT5G15190 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: LP.04 four leaves visible, 4 anthesis, petal
differentiation and expansion stage, E expanded cotyledon
stage, D bilateral stage; Has 7 Blast hits to 7 proteins in
3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.71 0.32 -0.33
80 AT2G04900 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Protein of unknown function DUF423
(InterPro:IPR006696); Has 1824 Blast hits to 1824 proteins
in 878 species: Archae - 0; Bacteria - 1498; Metazoa - 118;
Fungi - 14; Plants - 58; Viruses - 0; Other Eukaryotes -
136 (source: NCBI BLink).		 0.71 0.32 -0.31
81 AT1G03070 Bax inhibitor-1 family protein -0.71 0.32 -0.32
82 AT2G15000 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G34265.2); Has 70 Blast
hits to 70 proteins in 9 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.71 0.31 -0.32
83 AT4G38630 regulatory particle non-ATPase 10 ATMCB1, MULTIUBIQUITIN CHAIN
BINDING PROTEIN 1,
MULTIUBIQUITIN-CHAIN-BINDING
PROTEIN 1, regulatory particle
non-ATPase 10		 0.71 0.33 -0.31
84 AT4G13810 receptor like protein 47 receptor like protein 47, receptor
like protein 47		 -0.71 0.3 -0.31
85 AT4G23880 unknown protein; Has 73 Blast hits to 69 proteins in 22
species: Archae - 0; Bacteria - 4; Metazoa - 9; Fungi - 2;
Plants - 18; Viruses - 0; Other Eukaryotes - 40 (source:
NCBI BLink).		 -0.7 0.31 -0.3
86 AT5G25610 BURP domain-containing protein ATRD22, RESPONSIVE TO DESSICATION
22		 -0.68 0.29 -0.33
87 AT2G38905 Low temperature and salt responsive protein family -0.68 0.31 -0.32
88 AT1G53160 squamosa promoter binding protein-like 4 squamosa promoter binding
protein-like 4		 -0.67 0.31 -0.3
89 AT1G68220 Protein of unknown function (DUF1218) -0.67 0.32 -0.32
90 AT1G53170 ethylene response factor 8 ATERF-8, ETHYLENE RESPONSE ELEMENT
BINDING FACTOR 4, ethylene
response factor 8		 -0.67 0.32 -0.31
91 AT1G06110 SKP1/ASK-interacting protein 16 SKP1/ASK-interacting protein 16 -0.67 0.3 -0.31
92 AT2G31290 Ubiquitin carboxyl-terminal hydrolase family protein -0.66 0.32 -0.3
93 AT2G03890 phosphoinositide 4-kinase gamma 7 phosphoinositide 4-kinase gamma 7,
phosphoinositide 4-kinase gamma 7,
UBIQUITIN-LIKE DOMAIN KINASE GAMMA
7		 -0.66 0.34 -0.31
94 AT2G31980 PHYTOCYSTATIN 2 PHYTOCYSTATIN 2, PHYTOCYSTATIN 2 -0.65 0.3 -0.31
95 AT4G23870 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G11020.1); Has 12 Blast hits
to 12 proteins in 4 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 12; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.65 0.32 -0.33
96 AT3G46580 methyl-CPG-binding domain protein 5 ATMBD5, METHYL-CPG-BINDING DOMAIN
PROTEIN 05, methyl-CPG-binding
domain protein 5		 -0.63 0.3 -0.33
97 AT5G25470 AP2/B3-like transcriptional factor family protein -0.63 0.31 -0.32
98 AT1G69490 NAC-like, activated by AP3/PI Arabidopsis NAC domain containing
protein 29, NAC-LIKE, ACTIVATED BY
AP3/PI, NAC-like, activated by
AP3/PI		 -0.63 0.33 -0.3
99 AT4G26090 NB-ARC domain-containing disease resistance protein RESISTANT TO P. SYRINGAE 2 -0.63 0.31 -0.31
100 AT1G33400 Tetratricopeptide repeat (TPR)-like superfamily protein tetratricopeptide repeat 9 -0.63 0.31 -0.31
101 AT4G33905 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein -0.62 0.29 -0.33
102 AT2G15080 receptor like protein 19 receptor like protein 19, receptor
like protein 19		 -0.62 0.31 -0.32
103 AT1G69270 receptor-like protein kinase 1 receptor-like protein kinase 1 -0.62 0.29 -0.33
104 AT5G51990 C-repeat-binding factor 4 C-repeat-binding factor 4,
DEHYDRATION-RESPONSIVE
ELEMENT-BINDING PROTEIN 1D		 -0.61 0.31 -0.31
105 AT3G28590 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G79170.1); Has 1 Blast hits to
1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.61 0.33 -0.33
106 AT1G07720 3-ketoacyl-CoA synthase 3 3-ketoacyl-CoA synthase 3 -0.61 0.3 -0.32
107 AT4G28150 Protein of unknown function (DUF789) -0.6 0.31 -0.32
108 AT3G19790 unknown protein; Has 32 Blast hits to 26 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 2;
Plants - 14; Viruses - 0; Other Eukaryotes - 3 (source:
NCBI BLink).		 -0.6 0.31 -0.31
109 AT1G67050 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G38320.1); Has 617 Blast hits
to 318 proteins in 80 species: Archae - 0; Bacteria - 16;
Metazoa - 141; Fungi - 62; Plants - 128; Viruses - 2; Other
Eukaryotes - 268 (source: NCBI BLink).		 -0.6 0.32 -0.31
110 AT2G06410 transposable element gene -0.6 0.31 -0.33
111 AT1G48470 glutamine synthetase 1;5 glutamine synthetase 1;5 -0.59 0.31 -0.34
112 AT1G76900 tubby like protein 1 tubby like protein 1, tubby like
protein 1		 -0.59 0.32 -0.31
113 AT2G29380 highly ABA-induced PP2C gene 3 highly ABA-induced PP2C gene 3 -0.59 0.32 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
114 C0263 UMP - UMP pyrimidine salvage pathway,
dolichyl-diphosphooligosaccharide biosynthesis,
lipid IVA biosynthesis,
uridine-5'-phosphate biosynthesis,
pyrimidine ribonucleotides interconversion 		-0.83 0.46 -0.42 C0263