AT4G39370 : ubiquitin-specific protease 27
Query Information
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AGICode AT4G39370
Description ubiquitin-specific protease 27
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G39370 ubiquitin-specific protease 27 ubiquitin-specific protease 27 1 0.31 -0.32
2 AT1G61680 terpene synthase 14 TERPENE SYNTHASE 14, terpene
synthase 14		 0.67 0.3 -0.36
3 AT4G20420 Tapetum specific protein TAP35/TAP44 0.67 0.32 -0.31
4 AT3G54940 Papain family cysteine protease -0.65 0.32 -0.29
5 AT5G56330 alpha carbonic anhydrase 8 alpha carbonic anhydrase 8, A.
THALIANA ALPHA CARBONIC ANHYDRASE
8		 0.65 0.3 -0.31
6 AT2G25230 myb domain protein 100 myb domain protein 100, myb domain
protein 100		 0.64 0.32 -0.3
7 AT2G41370 Ankyrin repeat family protein / BTB/POZ domain-containing
protein		 BLADE ON PETIOLE2 0.64 0.3 -0.3
8 AT2G31590 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G04730.1); Has 30 Blast hits
to 30 proteins in 3 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other
Eukaryotes - 1 (source: NCBI BLink).		 0.64 0.32 -0.31
9 AT1G43840 transposable element gene -0.64 0.33 -0.31
10 AT5G33350 pseudogene, similar to P0406H10.5, nucleoid DNA-binding
protein cnd41, chloroplast - Nicotiana tabacum, PIR:T01996;
blastp match of 37% identity and 1.5e-57 P-value to
GP|9711879|dbj|BAB07973.1||AP002524 P0406H10.5 {Oryza
sativa (japonica cultivar-group)}		 0.64 0.28 -0.33
11 AT2G28180 Cation/hydrogen exchanger family protein ATCHX8, CHX08, CATION/H+ EXCHANGER
8		 -0.64 0.3 -0.34
12 AT5G29070 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: mitochondrion; BEST
Arabidopsis thaliana protein match is: zinc ion
binding;nucleic acid binding (TAIR:AT4G06479.1); Has 5
Blast hits to 5 proteins in 1 species: Archae - 0; Bacteria
- 0; Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.63 0.3 -0.32
13 ATMG01020 hypothetical protein ORF153B -0.63 0.31 -0.32
14 AT2G33600 NAD(P)-binding Rossmann-fold superfamily protein 0.62 0.33 -0.33
15 AT4G35120 Galactose oxidase/kelch repeat superfamily protein 0.62 0.31 -0.34
16 AT3G08500 myb domain protein 83 myb domain protein 83, myb domain
protein 83		 0.62 0.3 -0.33
17 AT1G63210 Transcription elongation factor Spt6 0.61 0.29 -0.3
18 AT4G39756 Galactose oxidase/kelch repeat superfamily protein 0.61 0.32 -0.31
19 AT5G67550 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: flower; EXPRESSED
DURING: 4 anthesis; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G71110.1); Has 161 Blast hits
to 154 proteins in 16 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 161; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.61 0.31 -0.31
20 AT4G17580 Bax inhibitor-1 family protein 0.6 0.32 -0.32
21 AT4G09290 transposable element gene -0.6 0.33 -0.31
22 AT3G21380 Mannose-binding lectin superfamily protein -0.6 0.29 -0.33
23 AT4G11300 Protein of unknown function (DUF793) 0.6 0.31 -0.32
24 AT1G30515 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 16 plant structures;
EXPRESSED DURING: 6 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT4G21740.1); Has 20 Blast hits to 20 proteins in 4
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.59 0.29 -0.33
25 AT3G30843 transposable element gene -0.59 0.31 -0.33
26 AT2G07380 transposable element gene -0.59 0.33 -0.32
27 AT1G06225 CLAVATA3/ESR-RELATED 3 CLAVATA3/ESR-RELATED 3 0.59 0.34 -0.29
28 AT2G02140 low-molecular-weight cysteine-rich 72 low-molecular-weight cysteine-rich
72, PDF2.6		 -0.59 0.32 -0.31
29 AT4G22790 MATE efflux family protein 0.59 0.3 -0.31
30 AT2G19390 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G29790.1); Has 203 Blast hits
to 188 proteins in 60 species: Archae - 0; Bacteria - 11;
Metazoa - 24; Fungi - 34; Plants - 93; Viruses - 0; Other
Eukaryotes - 41 (source: NCBI BLink).		 -0.59 0.33 -0.32
31 ATMG01200 hypothetical protein ORF294 -0.58 0.3 -0.32
32 AT3G16540 DegP protease 11 DegP protease 11 0.58 0.31 -0.29
33 AT3G57850 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: embryo, synergid; EXPRESSED DURING: C
globular stage; BEST Arabidopsis thaliana protein match is:
Plant self-incompatibility protein S1 family
(TAIR:AT3G57840.1); Has 7 Blast hits to 7 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.58 0.33 -0.29
34 AT1G42365 transposable element gene 0.58 0.31 -0.31
35 AT3G09370 myb domain protein 3r-3 myb domain protein 3R3, myb domain
protein 3r-3		 -0.58 0.3 -0.31
36 AT4G22620 SAUR-like auxin-responsive protein family -0.58 0.31 -0.31
37 AT4G11770 Galactose oxidase/kelch repeat superfamily protein 0.58 0.31 -0.31
38 AT1G01980 FAD-binding Berberine family protein 0.57 0.33 -0.34
39 AT2G12550 ubiquitin-associated (UBA)/TS-N domain-containing protein homolog of human NUB1 -0.57 0.31 -0.3
40 AT1G28630 unknown protein; Has 647 Blast hits to 524 proteins in 85
species: Archae - 0; Bacteria - 6; Metazoa - 100; Fungi -
44; Plants - 83; Viruses - 0; Other Eukaryotes - 414
(source: NCBI BLink).		 0.57 0.31 -0.3
41 AT1G68270 AMP-dependent synthetase and ligase family protein -0.57 0.32 -0.31
42 ATMG00160 cytochrome oxidase 2 cytochrome oxidase 2 -0.57 0.31 -0.31
43 AT5G27810 MADS-box transcription factor family protein 0.57 0.32 -0.31
44 AT1G63290 Aldolase-type TIM barrel family protein 0.57 0.31 -0.32
45 AT3G47250 Plant protein of unknown function (DUF247) 0.57 0.29 -0.31
46 AT1G29780 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 0.57 0.35 -0.31
47 AT5G27160 transposable element gene -0.57 0.33 -0.33
48 AT2G07440 two-component responsive regulator-related / response
regulator protein-related		 0.57 0.3 -0.3
49 AT2G29510 Protein of unknown function (DUF3527) 0.56 0.3 -0.33
50 AT1G68875 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: petal, leaf whorl,
sepal, flower, stamen; EXPRESSED DURING: 4 anthesis, petal
differentiation and expansion stage; Has 4 Blast hits to 4
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.56 0.32 -0.32
51 AT1G56100 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.56 0.31 -0.29
52 AT2G07740 transposable element gene 0.56 0.3 -0.31
53 AT2G45460 SMAD/FHA domain-containing protein -0.56 0.3 -0.31
54 AT1G30460 cleavage and polyadenylation specificity factor 30 ARABIDOPSIS THALIANA CLEAVAGE AND
POLYADENYLATION SPECIFICITY FACTOR
30, cleavage and polyadenylation
specificity factor 30		 -0.56 0.32 -0.32
55 AT5G41260 Protein kinase protein with tetratricopeptide repeat domain -0.56 0.31 -0.33
56 AT1G17390 transposable element gene 0.56 0.29 -0.31
57 AT3G16680 DNA binding;DNA-directed RNA polymerases 0.56 0.31 -0.32
58 AT4G03660 transposable element gene 0.56 0.34 -0.35
59 AT4G39490 cytochrome P450, family 96, subfamily A, polypeptide 10 cytochrome P450, family 96,
subfamily A, polypeptide 10		 0.55 0.31 -0.33
60 AT4G08840 pumilio 11 pumilio 11, pumilio 11 0.55 0.32 -0.31
61 AT5G38130 HXXXD-type acyl-transferase family protein 0.55 0.3 -0.32
62 AT4G17980 NAC domain containing protein 71 NAC domain containing protein 71,
NAC domain containing protein 71		 0.55 0.31 -0.31
63 AT1G13040 Pentatricopeptide repeat (PPR-like) superfamily protein -0.55 0.35 -0.31
64 AT2G06950 transposable element gene -0.55 0.31 -0.32
65 ATMG01000 hypothetical protein ORF114 -0.55 0.32 -0.32
66 AT1G42560 Seven transmembrane MLO family protein ARABIDOPSIS THALIANA MILDEW
RESISTANCE LOCUS O 9, MILDEW
RESISTANCE LOCUS O 9		 -0.55 0.32 -0.32
67 AT3G29775 transposable element gene -0.54 0.3 -0.33
68 AT4G04000 transposable element gene -0.54 0.32 -0.32
69 AT2G18915 LOV KELCH protein 2 ADAGIO 2, LOV KELCH protein 2 -0.54 0.32 -0.32
70 AT4G00880 SAUR-like auxin-responsive protein family 0.54 0.33 -0.28
71 AT3G03660 WUSCHEL related homeobox 11 WUSCHEL related homeobox 11 -0.54 0.31 -0.31
72 AT4G21323 Subtilase family protein -0.54 0.31 -0.3
73 AT5G47850 CRINKLY4 related 4 CRINKLY4 related 4 0.54 0.32 -0.3
74 AT1G54470 RNI-like superfamily protein resistance to Peronospora
parasitica 27		 0.54 0.3 -0.32
75 AT2G04420 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 0.54 0.31 -0.3
76 AT1G67640 Transmembrane amino acid transporter family protein 0.54 0.32 -0.32
77 AT2G07110 BEST Arabidopsis thaliana protein match is: Ribosomal
protein S5 domain 2-like superfamily protein
(TAIR:AT3G46210.6); Has 82 Blast hits to 82 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2;
Plants - 75; Viruses - 0; Other Eukaryotes - 5 (source:
NCBI BLink).		 0.54 0.31 -0.31
78 AT1G73430 sec34-like family protein -0.54 0.3 -0.32
79 AT5G04290 kow domain-containing transcription factor 1 kow domain-containing
transcription factor 1, SPT5-LIKE		 -0.53 0.33 -0.31
80 AT3G08750 F-box and associated interaction domains-containing protein 0.53 0.33 -0.32
81 AT1G77700 Pathogenesis-related thaumatin superfamily protein 0.53 0.3 -0.34
82 ATMG01240 hypothetical protein ORF100C -0.53 0.33 -0.31
83 AT2G07280 unknown protein; Has 19 Blast hits to 19 proteins in 3
species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0;
Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.53 0.32 -0.32
84 AT3G42310 unknown protein; Has 66 Blast hits to 66 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 12; Fungi - 0;
Plants - 18; Viruses - 31; Other Eukaryotes - 5 (source:
NCBI BLink).		 -0.53 0.29 -0.32
85 AT3G30260 AGAMOUS-like 79 AGAMOUS-like 79 0.53 0.3 -0.32
86 AT3G10630 UDP-Glycosyltransferase superfamily protein 0.53 0.33 -0.3
87 AT1G55325 RNA polymerase II transcription mediators GRAND CENTRAL, MACCHI-BOU 2 -0.52 0.3 -0.31
88 AT3G14000 DZC (Disease resistance/zinc finger/chromosome
condensation-like region) domain containing protein		 ATBRXL2, BRX-LIKE2 -0.52 0.34 -0.31
89 AT4G15310 cytochrome P450, family 702, subfamily A, polypeptide 3 cytochrome P450, family 702,
subfamily A, polypeptide 3		 0.52 0.34 -0.31
90 AT1G75910 extracellular lipase 4 extracellular lipase 4 0.52 0.31 -0.32
91 AT2G20805 BEST Arabidopsis thaliana protein match is: DNA-binding
storekeeper protein-related transcriptional regulator
(TAIR:AT1G11510.1); Has 47 Blast hits to 47 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 47; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.52 0.33 -0.31
92 AT1G22460 O-fucosyltransferase family protein 0.52 0.3 -0.33
93 AT2G02640 Cysteine/Histidine-rich C1 domain family protein 0.52 0.31 -0.33
94 AT4G19670 RING/U-box superfamily protein 0.52 0.3 -0.31
95 AT5G57730 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.52 0.32 -0.29
96 AT2G15870 transposable element gene 0.52 0.3 -0.35
97 AT5G47790 SMAD/FHA domain-containing protein 0.51 0.31 -0.32
98 AT2G28540 RNA binding (RRM/RBD/RNP motifs) family protein -0.51 0.29 -0.32
99 AT1G29110 Cysteine proteinases superfamily protein -0.51 0.31 -0.3
100 AT5G40155 Defensin-like (DEFL) family protein -0.51 0.33 -0.31
101 AT2G11010 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: mitochondrion; BEST
Arabidopsis thaliana protein match is: myosin heavy
chain-related (TAIR:AT5G32590.1); Has 404 Blast hits to 390
proteins in 105 species: Archae - 10; Bacteria - 61;
Metazoa - 184; Fungi - 25; Plants - 79; Viruses - 0; Other
Eukaryotes - 45 (source: NCBI BLink).		 0.51 0.3 -0.32
102 AT3G10460 Plant self-incompatibility protein S1 family 0.51 0.32 -0.3
103 AT4G12380 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.51 0.31 -0.3
104 AT5G51990 C-repeat-binding factor 4 C-repeat-binding factor 4,
DEHYDRATION-RESPONSIVE
ELEMENT-BINDING PROTEIN 1D		 0.5 0.34 -0.31
105 AT1G21360 glycolipid transfer protein 2 glycolipid transfer protein 2 -0.5 0.31 -0.31
106 AT1G75420 UDP-Glycosyltransferase superfamily protein -0.5 0.3 -0.33
107 AT5G19200 NAD(P)-binding Rossmann-fold superfamily protein TSC10B 0.5 0.32 -0.3
108 AT1G75860 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G20100.1); Has 258 Blast hits
to 235 proteins in 58 species: Archae - 0; Bacteria - 4;
Metazoa - 59; Fungi - 16; Plants - 90; Viruses - 0; Other
Eukaryotes - 89 (source: NCBI BLink).		 -0.5 0.31 -0.33
109 AT1G69860 Major facilitator superfamily protein 0.5 0.32 -0.29
110 AT5G61120 BEST Arabidopsis thaliana protein match is: Polynucleotidyl
transferase, ribonuclease H-like superfamily protein
(TAIR:AT5G61090.1); Has 125 Blast hits to 115 proteins in
16 species: Archae - 0; Bacteria - 0; Metazoa - 22; Fungi -
0; Plants - 102; Viruses - 0; Other Eukaryotes - 1 (source:
NCBI BLink).		 0.5 0.32 -0.31
111 AT1G32310 unknown protein; Has 28 Blast hits to 28 proteins in 9
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.5 0.36 -0.31
112 AT5G19090 Heavy metal transport/detoxification superfamily protein -0.5 0.34 -0.31
113 AT1G34240 transposable element gene 0.5 0.31 -0.31
114 AT5G04560 HhH-GPD base excision DNA repair family protein DEMETER -0.5 0.3 -0.32
115 AT1G72100 late embryogenesis abundant domain-containing protein / LEA
domain-containing protein		 -0.5 0.32 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
116 C0173 MST_2301.7 - - - -0.69 0.43 -0.42
117 C0086 Disinapylspermidine - - - -0.61 0.48 -0.4
118 C0201 Phosphatidylglycerol-32:1 - Phosphatidylglycerol-32:1 cardiolipin biosynthesis II,
linoleate biosynthesis I,
glycerophosphodiester degradation,
glutathione redox reactions I 		-0.52 0.33 -0.34