AT4G39460 : S-adenosylmethionine carrier 1
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT4G39460
Description S-adenosylmethionine carrier 1
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G39460 S-adenosylmethionine carrier 1 S-adenosylmethionine carrier 1,
SAM TRANSPORTER1		 1 0.32 -0.33
2 AT2G45270 glycoprotease 1 glycoprotease 1 0.93 0.31 -0.3
3 AT2G35500 shikimate kinase like 2 shikimate kinase-like 2 0.92 0.31 -0.32
4 AT5G14910 Heavy metal transport/detoxification superfamily protein 0.92 0.33 -0.31
5 AT4G11175 Nucleic acid-binding, OB-fold-like protein 0.92 0.32 -0.32
6 AT3G25660 Amidase family protein 0.92 0.32 -0.31
7 AT2G21280 NAD(P)-binding Rossmann-fold superfamily protein ATSULA, GIANT CHLOROPLAST 1, SULA 0.92 0.34 -0.3
8 AT1G32990 plastid ribosomal protein l11 plastid ribosomal protein l11 0.91 0.31 -0.32
9 AT3G06730 Thioredoxin z thioredoxin putative plastidic,
Thioredoxin z		 0.91 0.31 -0.32
10 AT5G47190 Ribosomal protein L19 family protein 0.91 0.33 -0.33
11 AT3G63190 ribosome recycling factor, chloroplast precursor Arabidopsis thaliana chloroplast
ribosome recycling factor,
chloroplast ribosome recycling
factor, HIGH CHLOROPHYLL
FLUORESCENCE AND PALE GREEN MUTANT
108, ribosome recycling factor,
chloroplast precursor		 0.91 0.33 -0.3
12 AT1G17650 glyoxylate reductase 2 glyoxylate reductase 2, GLYOXYLATE
REDUCTASE 2		 0.91 0.32 -0.32
13 AT3G44890 ribosomal protein L9 ribosomal protein L9 0.91 0.33 -0.32
14 AT5G63310 nucleoside diphosphate kinase 2 ARABIDOPSIS NUCLEOSIDE DIPHOSPHATE
KINASE 2, NUCLEOSIDE DIPHOSPHATE
KINASE IA, NDPK IA IA, NDP KINASE
1A, nucleoside diphosphate kinase
2		 0.91 0.3 -0.3
15 AT4G17560 Ribosomal protein L19 family protein 0.9 0.32 -0.31
16 AT2G30695 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
protein folding, protein transport; LOCATED IN: chloroplast
stroma, chloroplast; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Trigger factor, ribosome-binding, bacterial
(InterPro:IPR008881); Has 253 Blast hits to 253 proteins in
72 species: Archae - 0; Bacteria - 138; Metazoa - 0; Fungi
- 0; Plants - 40; Viruses - 0; Other Eukaryotes - 75
(source: NCBI BLink).		 0.9 0.35 -0.33
17 AT4G01310 Ribosomal L5P family protein 0.9 0.33 -0.34
18 AT1G78630 Ribosomal protein L13 family protein embryo defective 1473 0.9 0.32 -0.29
19 AT5G65220 Ribosomal L29 family protein 0.9 0.31 -0.32
20 AT2G48070 resistance to phytophthora 1 RESISTANCE TO PHYTOPHTHORA 1 0.9 0.31 -0.33
21 AT3G15110 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane; EXPRESSED IN: 20 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Protein of unknown function DUF3082
(InterPro:IPR021434); Has 77 Blast hits to 77 proteins in
38 species: Archae - 0; Bacteria - 37; Metazoa - 0; Fungi -
0; Plants - 39; Viruses - 0; Other Eukaryotes - 1 (source:
NCBI BLink).		 0.9 0.33 -0.33
22 AT4G24770 31-kDa RNA binding protein ARABIDOPSIS THALIANA RNA BINDING
PROTEIN, APPROXIMATELY 31 KD,
ATRBP33, CP31, 31-kDa RNA binding
protein		 0.9 0.32 -0.32
23 AT5G13510 Ribosomal protein L10 family protein EMBRYO DEFECTIVE 3136 0.9 0.32 -0.31
24 AT3G25480 Rhodanese/Cell cycle control phosphatase superfamily
protein		 0.9 0.32 -0.3
25 AT5G58250 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
thylakoid, chloroplast; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 14 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF2488
(InterPro:IPR019616); Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes -
339 (source: NCBI BLink).		 EMBRYO DEFECTIVE 3143 0.89 0.32 -0.34
26 AT1G11870 Seryl-tRNA synthetase ATSRS, ovule abortion 7,
Seryl-tRNA synthetase		 0.89 0.32 -0.31
27 AT3G14930 Uroporphyrinogen decarboxylase HEME1 0.89 0.31 -0.33
28 AT1G32200 phospholipid/glycerol acyltransferase family protein ACYLTRANSFERASE 1, ATS1 0.89 0.32 -0.32
29 AT2G38140 plastid-specific ribosomal protein 4 plastid-specific ribosomal protein
4		 0.89 0.33 -0.29
30 AT2G39140 pseudouridine synthase family protein PIGMENT DEFECTIVE 328, SUPPRESSOR
OF VARIEGATION 1		 0.89 0.28 -0.34
31 AT1G05190 Ribosomal protein L6 family embryo defective 2394 0.89 0.33 -0.32
32 AT1G29070 Ribosomal protein L34 0.89 0.3 -0.31
33 AT5G08650 Small GTP-binding protein 0.89 0.31 -0.33
34 AT5G30510 ribosomal protein S1 ARRPS1, ribosomal protein S1 0.89 0.31 -0.33
35 AT3G48730 glutamate-1-semialdehyde 2,1-aminomutase 2 glutamate-1-semialdehyde
2,1-aminomutase 2		 0.89 0.3 -0.32
36 AT3G56910 plastid-specific 50S ribosomal protein 5 plastid-specific 50S ribosomal
protein 5		 0.89 0.32 -0.32
37 AT5G52960 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF3143 (InterPro:IPR021489);
Has 1807 Blast hits to 1807 proteins in 277 species: Archae
- 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants -
385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI
BLink).		 0.88 0.34 -0.31
38 AT4G20130 plastid transcriptionally active 14 plastid transcriptionally active
14		 0.88 0.31 -0.31
39 AT5G42765 INVOLVED IN: biological_process unknown; LOCATED IN:
thylakoid, chloroplast thylakoid membrane, chloroplast;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Twin-arginine
translocation pathway, signal sequence
(InterPro:IPR006311); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.88 0.33 -0.34
40 AT5G06290 2-cysteine peroxiredoxin B 2-cysteine peroxiredoxin B, 2-CYS
PEROXIREDOXIN B		 0.88 0.31 -0.31
41 AT2G33450 Ribosomal L28 family 0.88 0.33 -0.31
42 AT1G75350 Ribosomal protein L31 embryo defective 2184 0.88 0.31 -0.3
43 AT5G52520 Class II aaRS and biotin synthetases superfamily protein OVULE ABORTION 6, PROLYL-TRNA
SYNTHETASE 1		 0.88 0.32 -0.34
44 AT1G36390 Co-chaperone GrpE family protein 0.88 0.32 -0.33
45 AT4G34190 stress enhanced protein 1 stress enhanced protein 1 0.88 0.31 -0.32
46 AT4G30950 fatty acid desaturase 6 fatty acid desaturase 6, FATTY
ACID DESATURASE C, STEAROYL
DESATURASE DEFICIENCY 4		 0.88 0.32 -0.33
47 AT5G16140 Peptidyl-tRNA hydrolase family protein 0.88 0.31 -0.32
48 AT1G20810 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 0.88 0.32 -0.33
49 AT5G51100 Fe superoxide dismutase 2 Fe superoxide dismutase 2 0.88 0.32 -0.29
50 AT2G02500 Nucleotide-diphospho-sugar transferases superfamily protein ATMEPCT, ISPD,
2-C-METHYL-D-ERYTHRITOL
4-PHOSPHATE CYTIDYLTRANSFERASE		 0.88 0.33 -0.31
51 AT5G16715 ATP binding;valine-tRNA ligases;aminoacyl-tRNA
ligases;nucleotide binding;ATP binding;aminoacyl-tRNA
ligases		 embryo defective 2247 0.88 0.33 -0.32
52 AT3G63490 Ribosomal protein L1p/L10e family EMBRYO DEFECTIVE 3126 0.88 0.34 -0.3
53 AT3G63410 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 ALBINO OR PALE GREEN MUTANT 1,
E37, INNER ENVELOPE PROTEIN 37,
VITAMIN E DEFECTIVE 3		 0.88 0.29 -0.33
54 AT4G20130 plastid transcriptionally active 14 plastid transcriptionally active
14		 0.88 0.32 -0.3
55 AT1G76450 Photosystem II reaction center PsbP family protein 0.87 0.31 -0.3
56 AT2G43560 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 0.87 0.33 -0.32
57 AT3G62030 rotamase CYP 4 cyclophilin 20-3, rotamase CYP 4 0.87 0.31 -0.33
58 AT1G48520 GLU-ADT subunit B GLU-ADT subunit B 0.87 0.36 -0.29
59 AT3G12080 GTP-binding family protein embryo defective 2738 0.87 0.31 -0.29
60 AT3G62910 Peptide chain release factor 1 ALBINO AND PALE GREEN 0.87 0.32 -0.33
61 AT5G55220 trigger factor type chaperone family protein 0.87 0.34 -0.33
62 AT3G53900 uracil phosphoribosyltransferase PYRIMIDINE R, uracil
phosphoribosyltransferase		 0.87 0.33 -0.3
63 AT3G27160 Ribosomal protein S21 family protein GLUCOSE HYPERSENSITIVE 1 0.87 0.31 -0.32
64 AT1G74970 ribosomal protein S9 ribosomal protein S9, TWN3 0.87 0.34 -0.33
65 AT3G51140 Protein of unknown function (DUF3353) 0.87 0.31 -0.31
66 AT5G46420 16S rRNA processing protein RimM family 0.87 0.31 -0.32
67 AT3G47650 DnaJ/Hsp40 cysteine-rich domain superfamily protein 0.86 0.3 -0.29
68 AT1G13270 methionine aminopeptidase 1B METHIONINE AMINOPEPTIDASE 1B,
methionine aminopeptidase 1B		 0.86 0.32 -0.32
69 AT3G60750 Transketolase 0.86 0.33 -0.31
70 AT3G60370 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 0.86 0.31 -0.32
71 AT3G08010 RNA binding ATAB2 0.86 0.31 -0.31
72 AT4G34620 small subunit ribosomal protein 16 small subunit ribosomal protein 16 0.86 0.32 -0.31
73 AT2G41680 NADPH-dependent thioredoxin reductase C NADPH-dependent thioredoxin
reductase C		 0.86 0.33 -0.32
74 AT1G69740 Aldolase superfamily protein HEMB1 0.86 0.31 -0.32
75 AT5G17710 Co-chaperone GrpE family protein embryo defective 1241 0.86 0.32 -0.34
76 AT2G44650 chloroplast chaperonin 10 chloroplast chaperonin 10,
CHLOROPLAST CHAPERONIN 10		 0.85 0.32 -0.33
77 AT5G23310 Fe superoxide dismutase 3 Fe superoxide dismutase 3 0.85 0.31 -0.31
78 AT2G47940 DEGP protease 2 DEGP protease 2, EMBRYO DEFECTIVE
3117		 0.85 0.31 -0.3
79 AT3G60210 GroES-like family protein 0.85 0.29 -0.31
80 AT4G32915 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
regulation of translational fidelity; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Glu-tRNAGln amidotransferase, C subunit
(InterPro:IPR003837); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.85 0.32 -0.31
81 AT1G02910 tetratricopeptide repeat (TPR)-containing protein LOW PSII ACCUMULATION1 0.85 0.32 -0.31
82 AT1G70200 RNA-binding (RRM/RBD/RNP motifs) family protein 0.85 0.34 -0.3
83 AT1G16080 unknown protein; LOCATED IN: apoplast, chloroplast stroma,
chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 14 growth stages; Has 81
Blast hits to 81 proteins in 28 species: Archae - 0;
Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 62; Viruses
- 0; Other Eukaryotes - 17 (source: NCBI BLink).		 0.85 0.32 -0.3
84 AT1G43560 thioredoxin Y2 thioredoxin Y2, thioredoxin Y2 0.85 0.33 -0.33
85 AT4G13220 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 27 Blast hits to 27 proteins
in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.85 0.31 -0.33
86 AT5G47840 adenosine monophosphate kinase adenosine monophosphate kinase 0.85 0.32 -0.32
87 AT5G28750 Bacterial sec-independent translocation protein mttA/Hcf106 0.85 0.32 -0.32
88 AT1G14410 ssDNA-binding transcriptional regulator A. THALIANA WHIRLY 1, PTAC1,
WHIRLY 1		 0.85 0.34 -0.32
89 AT5G06750 Protein phosphatase 2C family protein -0.77 0.29 -0.3
90 AT2G47130 NAD(P)-binding Rossmann-fold superfamily protein AtSDR3, short-chain
dehydrogenase/reductase 2		 -0.76 0.3 -0.33
91 AT3G61990 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 O-MTase family 3 protein -0.76 0.34 -0.31
92 AT2G39350 ABC-2 type transporter family protein ATP-binding cassette G1 -0.76 0.31 -0.32
93 AT4G39950 cytochrome P450, family 79, subfamily B, polypeptide 2 cytochrome P450, family 79,
subfamily B, polypeptide 2		 -0.75 0.33 -0.3
94 AT4G11350 Protein of unknown function (DUF604) -0.73 0.32 -0.3
95 AT4G39955 alpha/beta-Hydrolases superfamily protein -0.73 0.32 -0.3
96 AT3G21240 4-coumarate:CoA ligase 2 4-coumarate:CoA ligase 2, AT4CL2 -0.72 0.31 -0.32
97 AT2G38860 Class I glutamine amidotransferase-like superfamily protein YLS5 -0.72 0.34 -0.31
98 AT3G16450 Mannose-binding lectin superfamily protein Jacalin-related lectin 33 -0.72 0.31 -0.31
99 AT5G01830 ARM repeat superfamily protein -0.72 0.31 -0.32
100 AT3G26590 MATE efflux family protein -0.71 0.3 -0.32
101 AT5G67340 ARM repeat superfamily protein -0.71 0.31 -0.29
102 AT5G65660 hydroxyproline-rich glycoprotein family protein -0.71 0.33 -0.32
103 AT3G26440 Protein of unknown function (DUF707) -0.7 0.33 -0.31
104 AT1G30270 CBL-interacting protein kinase 23 ATCIPK23, CBL-interacting protein
kinase 23, LOW-K+-SENSITIVE 1,
SOS2-like protein kinase 17,
SNF1-RELATED PROTEIN KINASE 3.23		 -0.7 0.32 -0.33
105 AT4G34860 Plant neutral invertase family protein alkaline/neutral invertase B -0.69 0.33 -0.32
106 AT1G07260 UDP-glucosyl transferase 71C3 UDP-glucosyl transferase 71C3 -0.68 0.33 -0.31
107 AT5G18170 glutamate dehydrogenase 1 glutamate dehydrogenase 1 -0.68 0.33 -0.35
108 AT5G37740 Calcium-dependent lipid-binding (CaLB domain) family
protein		 -0.68 0.32 -0.31
109 AT3G12500 basic chitinase basic chitinase, B-CHI, CHI-B,
basic chitinase,
PATHOGENESIS-RELATED 3,
PATHOGENESIS-RELATED 3		 -0.67 0.31 -0.32
110 AT3G15300 VQ motif-containing protein -0.67 0.31 -0.34
111 AT5G65640 beta HLH protein 93 beta HLH protein 93 -0.67 0.34 -0.31
112 AT1G78960 lupeol synthase 2 lupeol synthase 2, lupeol synthase
2		 -0.67 0.29 -0.33
113 AT5G53990 UDP-Glycosyltransferase superfamily protein -0.67 0.31 -0.33
114 AT5G45380 solute:sodium symporters;urea transmembrane transporters ATDUR3, DEGRADATION OF UREA 3 -0.66 0.33 -0.33
115 AT3G18280 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.65 0.31 -0.3
116 AT3G03520 non-specific phospholipase C3 non-specific phospholipase C3 -0.65 0.34 -0.34
117 AT3G14680 cytochrome P450, family 72, subfamily A, polypeptide 14 cytochrome P450, family 72,
subfamily A, polypeptide 14		 -0.64 0.33 -0.32
118 AT4G20110 VACUOLAR SORTING RECEPTOR 7 binding protein of 80 kDa 3;1,
VACUOLAR SORTING RECEPTOR 3;1,
VACUOLAR SORTING RECEPTOR 7		 -0.64 0.32 -0.31
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
119 C0204 Phosphatidylglycerol-34:2 - Phosphatidylglycerol-34:2 cardiolipin biosynthesis II,
linoleate biosynthesis I,
glycerophosphodiester degradation,
glutathione redox reactions I 		0.85 0.46 -0.44 C0204