AGICode | AT4G39380 |
Description | BEST Arabidopsis thaliana protein match is: TSL-kinase interacting protein 1 (TAIR:AT2G36960.3); Has 80 Blast hits to 74 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT4G39380 | BEST Arabidopsis thaliana protein match is: TSL-kinase interacting protein 1 (TAIR:AT2G36960.3); Has 80 Blast hits to 74 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
1 | 0.29 | -0.33 | |||
2 | AT3G55590 | Glucose-1-phosphate adenylyltransferase family protein | -0.69 | 0.32 | -0.33 | |||
3 | AT5G44280 | RING 1A | ARABIDOPSIS THALIANA RING 1A, RING 1A |
0.67 | 0.3 | -0.34 | ||
4 | AT3G43970 | unknown protein; BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF295) (TAIR:AT5G53240.1); Has 56 Blast hits to 56 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.66 | 0.3 | -0.3 | |||
5 | AT1G53820 | RING/U-box superfamily protein | -0.65 | 0.32 | -0.32 | |||
6 | AT3G03580 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.64 | 0.28 | -0.32 | |||
7 | AT2G32460 | myb domain protein 101 | ARABIDOPSIS THALIANA MYB 1, ATMYB101, myb domain protein 101 |
0.64 | 0.31 | -0.31 | ||
8 | AT1G77240 | AMP-dependent synthetase and ligase family protein | -0.62 | 0.33 | -0.32 | |||
9 | AT1G72580 | unknown protein; Has 3 Blast hits to 3 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.62 | 0.34 | -0.29 | |||
10 | AT1G67600 | Acid phosphatase/vanadium-dependent haloperoxidase-related protein |
-0.6 | 0.32 | -0.3 | |||
11 | AT5G11910 | alpha/beta-Hydrolases superfamily protein | -0.59 | 0.29 | -0.31 | |||
12 | AT3G17790 | purple acid phosphatase 17 | ATACP5, ATPAP17, purple acid phosphatase 17 |
-0.59 | 0.32 | -0.31 | ||
13 | AT3G03320 | RNA-binding ASCH domain protein | -0.58 | 0.31 | -0.31 | |||
14 | AT2G01680 | Ankyrin repeat family protein | -0.58 | 0.33 | -0.32 | |||
15 | AT2G41120 | unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF309 (InterPro:IPR005500); Has 349 Blast hits to 349 proteins in 112 species: Archae - 2; Bacteria - 189; Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 127 (source: NCBI BLink). |
-0.58 | 0.33 | -0.31 | |||
16 | AT5G46620 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G17960.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.58 | 0.3 | -0.32 | |||
17 | AT3G16750 | unknown protein; Has 4708 Blast hits to 1416 proteins in 195 species: Archae - 36; Bacteria - 1240; Metazoa - 1232; Fungi - 406; Plants - 191; Viruses - 23; Other Eukaryotes - 1580 (source: NCBI BLink). |
-0.57 | 0.3 | -0.3 | |||
18 | AT3G10150 | purple acid phosphatase 16 | ATPAP16, purple acid phosphatase 16 |
-0.56 | 0.33 | -0.29 | ||
19 | AT1G08070 | Tetratricopeptide repeat (TPR)-like superfamily protein | EMBRYO DEFECTIVE 3102, ORGANELLE TRANSCRIPT PROCESSING 82 |
0.56 | 0.3 | -0.32 | ||
20 | AT2G41760 | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function WDYHV (InterPro:IPR019161); Has 201 Blast hits to 201 proteins in 90 species: Archae - 0; Bacteria - 2; Metazoa - 132; Fungi - 10; Plants - 30; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). |
-0.56 | 0.33 | -0.32 | |||
21 | AT1G39350 | transposable element gene | -0.56 | 0.31 | -0.32 | |||
22 | AT2G33250 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G04310.1); Has 41 Blast hits to 41 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.56 | 0.33 | -0.34 | |||
23 | AT3G21960 | Receptor-like protein kinase-related family protein | 0.55 | 0.31 | -0.32 | |||
24 | AT2G35820 | ureidoglycolate hydrolases | -0.55 | 0.3 | -0.31 | |||
25 | AT1G71130 | Integrase-type DNA-binding superfamily protein | cytokinin response factor 8 | -0.55 | 0.3 | -0.31 | ||
26 | AT1G12400 | Nucleotide excision repair, TFIIH, subunit TTDA | -0.54 | 0.31 | -0.33 | |||
27 | AT5G19430 | RING/U-box superfamily protein | -0.54 | 0.3 | -0.32 | |||
28 | AT2G31035 | BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 1B (TAIR:AT2G31030.1); Has 7 Blast hits to 7 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.54 | 0.33 | -0.32 | |||
29 | AT5G54000 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
-0.54 | 0.31 | -0.32 | |||
30 | AT5G53100 | NAD(P)-binding Rossmann-fold superfamily protein | 0.54 | 0.31 | -0.31 | |||
31 | AT1G17615 | Disease resistance protein (TIR-NBS class) | -0.54 | 0.29 | -0.3 | |||
32 | AT1G58160 | Mannose-binding lectin superfamily protein | -0.54 | 0.33 | -0.32 | |||
33 | AT5G32600 | transposable element gene | 0.53 | 0.32 | -0.31 | |||
34 | AT5G06900 | cytochrome P450, family 93, subfamily D, polypeptide 1 | cytochrome P450, family 93, subfamily D, polypeptide 1 |
-0.53 | 0.32 | -0.31 | ||
35 | AT4G17790 | SNARE associated Golgi protein family | -0.53 | 0.31 | -0.32 | |||
36 | AT4G36440 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 41 Blast hits to 41 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.53 | 0.31 | -0.31 | |||
37 | AT1G04380 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
0.53 | 0.33 | -0.31 | |||
38 | AT2G13680 | callose synthase 5 | ARABIDOPSIS THALIANA GLUCAN SYNTHASE-LIKE 2, callose synthase 5, GLUCAN SYNTHASE-LIKE 2 |
-0.53 | 0.32 | -0.33 | ||
39 | AT5G06170 | sucrose-proton symporter 9 | sucrose-proton symporter 9, sucrose-proton symporter 9 |
-0.53 | 0.31 | -0.29 | ||
40 | AT1G32600 | F-box associated ubiquitination effector family protein | -0.53 | 0.33 | -0.33 | |||
41 | AT4G09510 | cytosolic invertase 2 | alkaline/neutral invertase I, cytosolic invertase 2 |
0.52 | 0.3 | -0.29 | ||
42 | AT3G23130 | C2H2 and C2HC zinc fingers superfamily protein | FLORAL DEFECTIVE 10, FLORAL ORGAN NUMBER 1, SUPERMAN |
-0.52 | 0.32 | -0.34 | ||
43 | AT1G08310 | alpha/beta-Hydrolases superfamily protein | -0.52 | 0.32 | -0.32 | |||
44 | AT5G34450 | transposable element gene | -0.52 | 0.3 | -0.34 | |||
45 | AT1G34580 | Major facilitator superfamily protein | 0.52 | 0.31 | -0.31 | |||
46 | AT5G55810 | nicotinate/nicotinamide mononucleotide adenyltransferase | nicotinate/nicotinamide mononucleotide adenyltransferase, nicotinate/nicotinamide mononucleotide adenyltransferase |
-0.52 | 0.32 | -0.31 | ||
47 | AT1G17710 | Pyridoxal phosphate phosphatase-related protein | Arabidopsis thaliana phosphoethanolamine/phosphocholine phosphatase 1, phosphoethanolamine/phosphocholine phosphatase 1 |
-0.52 | 0.3 | -0.32 | ||
48 | AT2G23210 | UDP-Glycosyltransferase superfamily protein | 0.52 | 0.3 | -0.32 | |||
49 | AT4G00650 | FRIGIDA-like protein | FLOWERING LOCUS A, FRIGIDA | -0.51 | 0.33 | -0.34 | ||
50 | AT2G42980 | Eukaryotic aspartyl protease family protein | -0.51 | 0.31 | -0.3 | |||
51 | AT3G16175 | Thioesterase superfamily protein | -0.51 | 0.29 | -0.3 | |||
52 | AT4G05030 | Copper transport protein family | -0.51 | 0.31 | -0.31 | |||
53 | AT3G43310 | pseudogene, hypothetical protein, hypothetical protein At2g15420 - Arabidopsis thaliana, EMBL:AC006920 |
0.51 | 0.3 | -0.33 | |||
54 | AT1G22240 | pumilio 8 | pumilio 8, pumilio 8 | 0.51 | 0.3 | -0.31 | ||
55 | AT2G25380 | pseudogene of zinc finger protein-related | -0.51 | 0.31 | -0.3 | |||
56 | AT4G04550 | transposable element gene | 0.5 | 0.31 | -0.3 | |||
57 | AT5G35250 | transposable element gene | -0.5 | 0.32 | -0.32 | |||
58 | AT3G06433 | pseudogene of nodulin MtN3 family protein | -0.5 | 0.3 | -0.31 | |||
59 | AT1G70910 | RING/U-box superfamily protein | DESPIERTO | -0.5 | 0.3 | -0.31 | ||
60 | AT5G51020 | crumpled leaf | constitutive activator of AAA-ATPase, CRUMPLED LEAF |
-0.49 | 0.32 | -0.3 | ||
61 | AT1G55960 | Polyketide cyclase/dehydrase and lipid transport superfamily protein |
-0.49 | 0.32 | -0.28 | |||
62 | AT4G36510 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.49 | 0.31 | -0.31 | |||
63 | AT3G48700 | carboxyesterase 13 | carboxyesterase 13, carboxyesterase 13 |
0.49 | 0.32 | -0.33 | ||
64 | AT3G01530 | myb domain protein 57 | myb domain protein 57, myb domain protein 57 |
0.49 | 0.31 | -0.32 | ||
65 | AT5G07230 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
-0.49 | 0.31 | -0.31 | |||
66 | AT5G61750 | RmlC-like cupins superfamily protein | -0.49 | 0.32 | -0.31 | |||
67 | AT3G49150 | F-box/RNI-like superfamily protein | 0.49 | 0.34 | -0.32 | |||
68 | AT3G02980 | MEIOTIC CONTROL OF CROSSOVERS1 | MEIOTIC CONTROL OF CROSSOVERS1 | -0.49 | 0.31 | -0.32 | ||
69 | AT3G10630 | UDP-Glycosyltransferase superfamily protein | -0.49 | 0.33 | -0.3 | |||
70 | AT4G23000 | Calcineurin-like metallo-phosphoesterase superfamily protein |
-0.49 | 0.31 | -0.31 | |||
71 | AT3G42710 | transposable element gene | 0.49 | 0.32 | -0.34 | |||
72 | AT5G62750 | unknown protein; Has 24942 Blast hits to 11726 proteins in 897 species: Archae - 48; Bacteria - 2086; Metazoa - 8361; Fungi - 2243; Plants - 1040; Viruses - 210; Other Eukaryotes - 10954 (source: NCBI BLink). |
0.48 | 0.31 | -0.32 | |||
73 | AT1G16380 | Cation/hydrogen exchanger family protein | ATCHX1, CATION EXCHANGER 1 | 0.48 | 0.33 | -0.34 | ||
74 | AT3G06180 | Ribosomal protein L34e superfamily protein | 0.48 | 0.31 | -0.32 |