AT4G39540 : ATSK2
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT4G39540
Description shikimate kinase 2
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G39540 shikimate kinase 2 ATSK2, shikimate kinase 2 1 0.33 -0.29
2 AT5G02940 Protein of unknown function (DUF1012) 0.9 0.32 -0.3
3 AT2G29450 glutathione S-transferase tau 5 AT103-1A, ARABIDOPSIS THALIANA
GLUTATHIONE S-TRANSFERASE TAU 1,
glutathione S-transferase tau 5,
glutathione S-transferase tau 5		 0.89 0.32 -0.32
4 AT5G13800 pheophytinase Co-regulated with NYE1,
pheophytinase		 0.86 0.3 -0.31
5 AT3G48350 Cysteine proteinases superfamily protein cysteine endopeptidase 3 0.86 0.34 -0.31
6 AT2G47710 Adenine nucleotide alpha hydrolases-like superfamily
protein		 0.85 0.3 -0.29
7 AT3G03890 FMN binding 0.84 0.33 -0.33
8 AT3G46670 UDP-glucosyl transferase 76E11 UDP-glucosyl transferase 76E11 0.84 0.31 -0.3
9 AT5G65280 GCR2-like 1 GCR2-like 1 0.84 0.3 -0.31
10 AT5G17630 Nucleotide/sugar transporter family protein -0.83 0.32 -0.31
11 AT4G37980 elicitor-activated gene 3-1 ATCAD7, CINNAMYL-ALCOHOL
DEHYDROGENASE 7,
ELICITOR-ACTIVATED GENE 3,
elicitor-activated gene 3-1		 0.83 0.31 -0.32
12 AT1G52000 Mannose-binding lectin superfamily protein 0.83 0.32 -0.31
13 AT1G01710 Acyl-CoA thioesterase family protein 0.83 0.32 -0.3
14 AT3G23490 cyanase cyanase 0.83 0.33 -0.3
15 AT2G34310 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G29530.1); Has 1236 Blast hits to 680 proteins in
89 species: Archae - 0; Bacteria - 0; Metazoa - 473; Fungi
- 0; Plants - 332; Viruses - 0; Other Eukaryotes - 431
(source: NCBI BLink).		 0.83 0.31 -0.31
16 AT1G52410 TSK-associating protein 1 TSK-associating protein 1 0.83 0.32 -0.34
17 AT2G43530 Scorpion toxin-like knottin superfamily protein 0.83 0.31 -0.29
18 AT2G18950 homogentisate phytyltransferase 1 HOMOGENTISATE PHYTYLTRANSFERASE,
homogentisate phytyltransferase 1,
TPT1, VITAMIN E 2		 0.83 0.34 -0.34
19 AT1G58200 MSCS-like 3 MSCS-like 3 0.82 0.32 -0.32
20 AT1G47128 Granulin repeat cysteine protease family protein responsive to dehydration 21,
RESPONSIVE TO DEHYDRATION 21A		 0.82 0.33 -0.32
21 AT2G01490 phytanoyl-CoA dioxygenase (PhyH) family protein 0.82 0.31 -0.34
22 AT3G48690 alpha/beta-Hydrolases superfamily protein ARABIDOPSIS THALIANA
CARBOXYESTERASE 12, CXE12		 0.82 0.3 -0.31
23 AT3G28220 TRAF-like family protein 0.82 0.3 -0.31
24 AT2G15310 ADP-ribosylation factor B1A ADP-ribosylation factor B1A,
ADP-ribosylation factor B1A		 0.81 0.34 -0.31
25 AT5G18130 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G03870.2); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.8 0.31 -0.31
26 AT5G42810 inositol-pentakisphosphate 2-kinase 1 inositol-pentakisphosphate
2-kinase 1,
inositol-pentakisphosphate
2-kinase 1		 0.8 0.3 -0.31
27 AT4G17470 alpha/beta-Hydrolases superfamily protein 0.8 0.32 -0.31
28 AT1G64660 methionine gamma-lyase methionine gamma-lyase, methionine
gamma-lyase		 0.8 0.3 -0.29
29 AT4G12580 unknown protein; Has 24 Blast hits to 18 proteins in 5
species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 15 (source:
NCBI BLink).		 0.8 0.31 -0.31
30 AT5G38530 tryptophan synthase beta type 2 tryptophan synthase beta type 2 0.8 0.3 -0.32
31 AT1G13730 Nuclear transport factor 2 (NTF2) family protein with RNA
binding (RRM-RBD-RNP motifs) domain		 -0.8 0.31 -0.31
32 AT1G23410 Ribosomal protein S27a / Ubiquitin family protein -0.79 0.32 -0.3
33 AT5G57815 Cytochrome c oxidase, subunit Vib family protein 0.79 0.34 -0.3
34 AT4G22260 Alternative oxidase family protein IMMUTANS, IM1 0.79 0.32 -0.31
35 AT2G34810 FAD-binding Berberine family protein 0.79 0.31 -0.31
36 AT2G35490 Plastid-lipid associated protein PAP / fibrillin family
protein		 0.79 0.32 -0.3
37 AT5G20900 jasmonate-zim-domain protein 12 jasmonate-zim-domain protein 12,
TIFY3B		 0.79 0.33 -0.31
38 AT3G47960 Major facilitator superfamily protein 0.79 0.31 -0.32
39 AT2G40435 BEST Arabidopsis thaliana protein match is: transcription
regulators (TAIR:AT3G56220.1); Has 289 Blast hits to 289
proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 289; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.79 0.31 -0.3
40 AT3G63200 PATATIN-like protein 9 PLA IIIB, PATATIN-like protein 9 -0.78 0.3 -0.31
41 AT3G59670 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G37440.2); Has 77 Blast hits
to 77 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other
Eukaryotes - 4 (source: NCBI BLink).		 -0.78 0.3 -0.29
42 AT2G27820 prephenate dehydratase 1 arogenate dehydratase 3,
prephenate dehydratase 1		 0.78 0.32 -0.31
43 AT3G02150 plastid transcription factor 1 plastid transcription factor 1,
TEOSINTE BRANCHED1, CYCLOIDEA AND
PCF TRANSCRIPTION FACTOR 13, TFPD		 0.78 0.31 -0.31
44 AT3G44880 Pheophorbide a oxygenase family protein with Rieske
[2Fe-2S] domain		 ACCELERATED CELL DEATH 1, LETHAL
LEAF-SPOT 1 HOMOLOG, PHEOPHORBIDE
A OXYGENASE		 0.78 0.31 -0.33
45 AT5G14700 NAD(P)-binding Rossmann-fold superfamily protein 0.78 0.31 -0.31
46 AT1G24070 cellulose synthase-like A10 cellulose synthase-like A10,
CELLULOSE SYNTHASE LIKE A10,
cellulose synthase-like A10		 0.78 0.3 -0.32
47 AT1G18720 Protein of unknown function (DUF962) 0.78 0.31 -0.33
48 AT5G56040 Leucine-rich receptor-like protein kinase family protein -0.77 0.31 -0.3
49 AT4G34555 Ribosomal protein S25 family protein -0.77 0.29 -0.33
50 AT1G60390 polygalacturonase 1 polygalacturonase 1 -0.77 0.31 -0.31
51 AT5G52450 MATE efflux family protein 0.77 0.31 -0.32
52 AT3G01200 PPDK regulatory protein 2 PPDK regulatory protein 2, PPDK
regulatory protein 2		 0.77 0.3 -0.34
53 AT3G26380 Melibiase family protein 0.77 0.31 -0.3
54 AT5G19920 Transducin/WD40 repeat-like superfamily protein -0.77 0.33 -0.31
55 AT5G56180 actin-related protein 8 ARP8, actin-related protein 8,
actin-related protein 8		 0.77 0.34 -0.31
56 AT3G21750 UDP-glucosyl transferase 71B1 UDP-glucosyl transferase 71B1 0.77 0.32 -0.31
57 AT1G12050 fumarylacetoacetase, putative 0.76 0.32 -0.3
58 AT2G31820 Ankyrin repeat family protein 0.76 0.34 -0.3
59 AT4G30810 serine carboxypeptidase-like 29 serine carboxypeptidase-like 29 0.76 0.32 -0.3
60 AT5G42740 Sugar isomerase (SIS) family protein 0.76 0.33 -0.31
61 AT2G39330 jacalin-related lectin 23 jacalin-related lectin 23 0.76 0.32 -0.34
62 AT1G49600 RNA-binding protein 47A RNA-binding protein 47A,
RNA-binding protein 47A		 -0.76 0.31 -0.32
63 AT1G28290 arabinogalactan protein 31 arabinogalactan protein 31 -0.76 0.32 -0.32
64 AT4G18140 SCP1-like small phosphatase 4b SCP1-like small phosphatase 4b 0.76 0.31 -0.29
65 AT2G25950 Protein of unknown function (DUF1000) 0.76 0.34 -0.31
66 AT1G31550 GDSL-like Lipase/Acylhydrolase superfamily protein 0.76 0.33 -0.31
67 AT3G03990 alpha/beta-Hydrolases superfamily protein 0.76 0.31 -0.32
68 AT5G10020 Leucine-rich receptor-like protein kinase family protein -0.76 0.31 -0.33
69 AT1G26910 Ribosomal protein L16p/L10e family protein ribosomal protein L10 B -0.76 0.31 -0.34
70 AT1G48630 receptor for activated C kinase 1B receptor for activated C kinase
1B, receptor for activated C
kinase 1B		 -0.76 0.31 -0.31
71 AT2G41510 cytokinin oxidase/dehydrogenase 1 CYTOKININ OXIDASE/DEHYDROGENASE 1,
cytokinin oxidase/dehydrogenase 1		 -0.75 0.31 -0.31
72 AT3G57150 homologue of NAP57 AtCBF5, AtNAP57, CBF5, homologue
of NAP57		 -0.75 0.3 -0.31
73 AT3G11880 Protein of unknown function DUF2359, transmembrane 0.75 0.32 -0.34
74 AT1G56650 production of anthocyanin pigment 1 MYB DOMAIN PROTEIN 75,
MYELOBLASTOSIS PROTEIN 75,
production of anthocyanin pigment
1, SUC-INDUCED ANTHOCYANIN
ACCUMULATION 1		 0.75 0.31 -0.3
75 AT1G78120 Tetratricopeptide repeat (TPR)-like superfamily protein tetratricopeptide repeat 12 -0.75 0.31 -0.32
76 AT5G24420 6-phosphogluconolactonase 5 6-phosphogluconolactonase 5 0.75 0.29 -0.29
77 AT4G11960 PGR5-like B PGR5-like B 0.75 0.33 -0.34
78 AT1G08360 Ribosomal protein L1p/L10e family -0.75 0.3 -0.31
79 AT1G26770 expansin A10 ARABIDOPSIS THALIANA EXPANSIN 10,
ARABIDOPSIS THALIANA EXPANSIN 10,
expansin A10, ARABIDOPSIS THALIANA
EXPANSIN ALPHA 1.1, EXPANSIN 10,
expansin A10		 0.75 0.32 -0.32
80 AT2G20490 nucleolar RNA-binding Nop10p family protein EMBRYO SAC DEVELOPMENT ARREST 27,
NOP10		 -0.75 0.32 -0.31
81 AT1G30220 inositol transporter 2 ARABIDOPSIS THALIANA INOSITOL
TRANSPORTER 2, inositol
transporter 2		 0.75 0.32 -0.31
82 AT3G03960 TCP-1/cpn60 chaperonin family protein -0.75 0.32 -0.32
83 AT2G20920 Protein of unknown function (DUF3353) 0.75 0.27 -0.32
84 AT1G06130 glyoxalase 2-4 glyoxalase 2-4 0.75 0.31 -0.32
85 AT1G64810 Arabidopsis thaliana protein of unknown function (DUF794) ACCUMULATION OF PHOTOSYSTEM ONE 1 0.75 0.32 -0.31
86 AT3G46110 Domain of unknown function (DUF966) 0.75 0.3 -0.33
87 AT3G02530 TCP-1/cpn60 chaperonin family protein -0.74 0.34 -0.3
88 AT2G11910 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast envelope; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 92883 Blast hits to
31060 proteins in 1576 species: Archae - 765; Bacteria -
32670; Metazoa - 21164; Fungi - 12252; Plants - 4238;
Viruses - 1282; Other Eukaryotes - 20512 (source: NCBI
BLink).		 -0.74 0.31 -0.31
89 AT1G30570 hercules receptor kinase 2 hercules receptor kinase 2 -0.74 0.32 -0.34
90 AT1G18250 Pathogenesis-related thaumatin superfamily protein ATLP-1 -0.73 0.28 -0.33
91 AT2G19670 protein arginine methyltransferase 1A ARABIDOPSIS THALIANA PROTEIN
ARGININE METHYLTRANSFERASE 1A,
protein arginine methyltransferase
1A		 -0.73 0.32 -0.3
92 AT5G41670 6-phosphogluconate dehydrogenase family protein -0.73 0.3 -0.32
93 AT1G10030 homolog of yeast ergosterol28 homolog of yeast ergosterol28 -0.73 0.32 -0.33
94 AT1G22880 cellulase 5 ARABIDOPSIS THALIANA CELLULASE 5,
ARABIDOPSIS THALIANA GLYCOSYL
HYDROLASE 9B4, cellulase 5		 -0.73 0.31 -0.31
95 AT5G64100 Peroxidase superfamily protein -0.73 0.31 -0.33
96 AT5G25810 Integrase-type DNA-binding superfamily protein TINY -0.73 0.31 -0.3
97 AT1G75780 tubulin beta-1 chain tubulin beta-1 chain -0.72 0.3 -0.32
98 AT5G13870 xyloglucan endotransglucosylase/hydrolase 5 endoxyloglucan transferase A4,
xyloglucan
endotransglucosylase/hydrolase 5		 -0.72 0.3 -0.31
99 AT4G32720 La protein 1 La protein 1, La protein 1 -0.72 0.32 -0.34
100 AT3G45090 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.72 0.33 -0.29
101 AT1G18040 cyclin-dependent kinase D1;3 CYCLIN-DEPENDENT KINASE D1;3,
CAK2AT, cyclin-dependent kinase
D1;3		 -0.71 0.31 -0.34
102 AT5G19040 isopentenyltransferase 5 Arabidopsis thaliana
ISOPENTENYLTRANSFERASE 5,
isopentenyltransferase 5		 -0.71 0.3 -0.33
103 AT5G20890 TCP-1/cpn60 chaperonin family protein -0.71 0.33 -0.33
104 AT1G71790 Subunits of heterodimeric actin filament capping protein
Capz superfamily		 -0.71 0.3 -0.31
105 AT5G57120 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: nucleolus;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: LisH
dimerisation motif (InterPro:IPR006594), SRP40, C-terminal
(InterPro:IPR007718); Has 101969 Blast hits to 55488
proteins in 2506 species: Archae - 424; Bacteria - 13843;
Metazoa - 37674; Fungi - 9726; Plants - 4941; Viruses -
569; Other Eukaryotes - 34792 (source: NCBI BLink).		 -0.71 0.3 -0.33
106 AT2G19970 CAP (Cysteine-rich secretory proteins, Antigen 5, and
Pathogenesis-related 1 protein) superfamily protein		 -0.71 0.34 -0.33
107 AT3G28860 ATP binding cassette subfamily B19 ATP-binding cassette B19,
Arabidopsis thaliana ATP-binding
cassette B19, ATMDR1, MULTIDRUG
RESISTANCE PROTEIN 11, ATPGP19,
MDR1, MDR11, P-GLYCOPROTEIN 19		 -0.7 0.31 -0.32
108 AT3G54260 TRICHOME BIREFRINGENCE-LIKE 36 TRICHOME BIREFRINGENCE-LIKE 36 -0.7 0.31 -0.31
109 AT5G50310 Galactose oxidase/kelch repeat superfamily protein -0.7 0.31 -0.3
110 AT3G05900 neurofilament protein-related -0.7 0.3 -0.31
111 AT1G80270 PENTATRICOPEPTIDE REPEAT 596 PENTATRICOPEPTIDE REPEAT 596 -0.7 0.32 -0.31
112 AT1G49760 poly(A) binding protein 8 poly(A) binding protein 8, POLY(A)
BINDING PROTEIN 8		 -0.69 0.31 -0.33
113 AT1G30840 purine permease 4 purine permease 4, purine permease
4		 -0.69 0.32 -0.32
114 AT1G77550 tubulin-tyrosine ligases;tubulin-tyrosine ligases -0.69 0.32 -0.32
115 AT3G25790 myb-like transcription factor family protein -0.69 0.3 -0.31
116 AT4G27590 Heavy metal transport/detoxification superfamily protein -0.69 0.33 -0.32
117 AT3G18200 nodulin MtN21 /EamA-like transporter family protein -0.69 0.33 -0.31
118 AT4G30800 Nucleic acid-binding, OB-fold-like protein -0.69 0.33 -0.31
119 AT2G24300 Calmodulin-binding protein -0.68 0.32 -0.33
120 AT4G19030 NOD26-like major intrinsic protein 1 AT-NLM1, NOD26-LIKE MAJOR
INTRINSIC PROTEIN 1, NOD26-LIKE
INTRINSIC PROTEIN 1;1, NOD26-like
major intrinsic protein 1		 -0.68 0.33 -0.31
121 AT4G26760 microtubule-associated protein 65-2 microtubule-associated protein
65-2		 -0.68 0.31 -0.31
122 AT1G01050 pyrophosphorylase 1 pyrophosphorylase 1,
pyrophosphorylase 1		 -0.68 0.31 -0.32
123 AT3G18190 TCP-1/cpn60 chaperonin family protein -0.68 0.32 -0.34
124 AT3G63130 RAN GTPase activating protein 1 RAN GTPASE-ACTIVATING PROTEIN 1,
RAN GTPase activating protein 1		 -0.68 0.31 -0.32
125 AT2G13820 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 AtXYP2, xylogen protein 2 -0.68 0.32 -0.32
126 AT5G03960 IQ-domain 12 IQ-domain 12 -0.68 0.32 -0.32
127 AT5G17960 Cysteine/Histidine-rich C1 domain family protein -0.68 0.33 -0.31
128 AT1G50110 D-aminoacid aminotransferase-like PLP-dependent enzymes
superfamily protein		 -0.68 0.32 -0.3
129 AT5G54670 kinesin 3 kinesin 3, KINESIN-LIKE PROTEIN IN
ARABIDOPSIS THALIANA C		 -0.68 0.31 -0.34
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
130 C0050 8-Methylthio-n-octylglucosinolate - 8-Methylthiooctyl glucosinolate glucosinolate biosynthesis from hexahomomethionine -0.78 0.45 -0.42 C0050
131 C0125 isorhamnetin-3-O-glucoside - - - -0.69 0.47 -0.42