AGICode | AT4G39570 |
Description | Galactose oxidase/kelch repeat superfamily protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT4G39570 | Galactose oxidase/kelch repeat superfamily protein | 1 | 0.33 | -0.33 | |||
2 | AT5G40920 | pseudogene, disease resistance protein (TIR-NBS-LRR class), putative, domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein. |
0.74 | 0.29 | -0.33 | |||
3 | AT3G18710 | plant U-box 29 | ARABIDOPSIS THALIANA PLANT U-BOX 29, plant U-box 29 |
0.72 | 0.32 | -0.33 | ||
4 | AT3G19540 | Protein of unknown function (DUF620) | 0.71 | 0.31 | -0.3 | |||
5 | AT1G53570 | mitogen-activated protein kinase kinase kinase 3 | mitogen-activated protein kinase kinase kinase 3, MAP KINASE KINASE KINASE 3 |
-0.71 | 0.3 | -0.31 | ||
6 | AT5G43560 | TRAF-like superfamily protein | -0.7 | 0.32 | -0.31 | |||
7 | AT3G50060 | myb domain protein 77 | myb domain protein 77 | 0.69 | 0.32 | -0.32 | ||
8 | AT5G23890 | LOCATED IN: mitochondrion, chloroplast thylakoid membrane, chloroplast, plastid, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: S-layer homology domain (InterPro:IPR001119); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G52410.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.68 | 0.3 | -0.3 | |||
9 | AT4G25490 | C-repeat/DRE binding factor 1 | ATCBF1, C-repeat/DRE binding factor 1, DRE BINDING PROTEIN 1B |
0.68 | 0.31 | -0.3 | ||
10 | AT1G58420 | Uncharacterised conserved protein UCP031279 | 0.68 | 0.34 | -0.3 | |||
11 | AT2G41010 | calmodulin (CAM)-binding protein of 25 kDa | calmodulin (CAM)-binding protein of 25 kDa, calmodulin (CAM)-binding protein of 25 kDa |
0.67 | 0.3 | -0.3 | ||
12 | AT1G72950 | Disease resistance protein (TIR-NBS class) | 0.67 | 0.34 | -0.31 | |||
13 | AT1G22190 | Integrase-type DNA-binding superfamily protein | related to AP2 4 | 0.67 | 0.31 | -0.3 | ||
14 | AT5G17350 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03280.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.66 | 0.31 | -0.3 | |||
15 | AT1G49470 | Family of unknown function (DUF716) | -0.66 | 0.34 | -0.32 | |||
16 | AT5G43940 | GroES-like zinc-binding dehydrogenase family protein | ALCOHOL DEHYDROGENASE 2, ATGSNOR1, S-NITROSOGLUTATHIONE REDUCTASE, sensitive to hot temperatures 5, PARAQUAT RESISTANT 2 |
-0.66 | 0.33 | -0.3 | ||
17 | AT2G26190 | calmodulin-binding family protein | 0.65 | 0.32 | -0.32 | |||
18 | AT4G03320 | translocon at the inner envelope membrane of chloroplasts 20-IV |
translocon at the inner envelope membrane of chloroplasts 20-IV, translocon at the inner envelope membrane of chloroplasts 20-IV |
-0.65 | 0.3 | -0.36 | ||
19 | AT3G15530 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
0.65 | 0.3 | -0.31 | |||
20 | AT1G64380 | Integrase-type DNA-binding superfamily protein | 0.65 | 0.32 | -0.3 | |||
21 | AT1G49840 | Protein of unknown function (DUF620) | 0.65 | 0.31 | -0.3 | |||
22 | AT1G53160 | squamosa promoter binding protein-like 4 | squamosa promoter binding protein-like 4 |
0.64 | 0.33 | -0.3 | ||
23 | AT4G03020 | transducin family protein / WD-40 repeat family protein | -0.64 | 0.3 | -0.32 | |||
24 | AT2G35480 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G32260.1); Has 47 Blast hits to 47 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.64 | 0.31 | -0.31 | |||
25 | AT1G79340 | metacaspase 4 | metacaspase 4, metacaspase 2d, metacaspase 4, metacaspase 2d |
-0.64 | 0.32 | -0.32 | ||
26 | AT5G11070 | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.64 | 0.3 | -0.32 | |||
27 | AT5G43745 | Protein of unknown function (DUF1012) | -0.64 | 0.29 | -0.33 | |||
28 | AT4G08170 | Inositol 1,3,4-trisphosphate 5/6-kinase family protein | -0.63 | 0.31 | -0.31 | |||
29 | AT2G32260 | phosphorylcholine cytidylyltransferase | ATCCT1, phosphorylcholine cytidylyltransferase |
-0.63 | 0.32 | -0.32 | ||
30 | AT3G29075 | glycine-rich protein | -0.63 | 0.3 | -0.33 | |||
31 | AT4G16845 | VEFS-Box of polycomb protein | REDUCED VERNALIZATION RESPONSE 2 | -0.63 | 0.33 | -0.32 | ||
32 | AT3G51250 | Senescence/dehydration-associated protein-related | -0.62 | 0.31 | -0.31 | |||
33 | AT5G55370 | MBOAT (membrane bound O-acyl transferase) family protein | 0.62 | 0.3 | -0.3 | |||
34 | AT4G24550 | Clathrin adaptor complexes medium subunit family protein | -0.62 | 0.31 | -0.3 | |||
35 | AT5G64440 | fatty acid amide hydrolase | fatty acid amide hydrolase, fatty acid amide hydrolase |
-0.62 | 0.32 | -0.34 | ||
36 | AT3G03250 | UDP-GLUCOSE PYROPHOSPHORYLASE 1 | UDP-GLUCOSE PYROPHOSPHORYLASE 1, UDP-glucose pyrophosphorylase, UDP-GLUCOSE PYROPHOSPHORYLASE 1 |
-0.62 | 0.3 | -0.3 | ||
37 | AT2G35170 | Histone H3 K4-specific methyltransferase SET7/9 family protein |
0.62 | 0.31 | -0.33 | |||
38 | AT1G10940 | Protein kinase superfamily protein | ARABIDOPSIS SERINE/THREONINE KINASE 1, SUCROSE NONFERMENTING 1-RELATED PROTEIN KINASE 2-4, SNF1-related protein kinase 2.4, SRK2A |
-0.62 | 0.32 | -0.3 | ||
39 | AT1G45000 | AAA-type ATPase family protein | -0.62 | 0.34 | -0.33 | |||
40 | AT4G17530 | RAB GTPase homolog 1C | RAB GTPase homolog 1C, ATRABD2C, RAB1C, RAB GTPase homolog 1C |
-0.62 | 0.3 | -0.32 | ||
41 | AT2G01670 | nudix hydrolase homolog 17 | nudix hydrolase homolog 17, nudix hydrolase homolog 17 |
0.62 | 0.31 | -0.3 | ||
42 | AT3G04860 | Plant protein of unknown function (DUF868) | 0.62 | 0.33 | -0.3 | |||
43 | AT5G02590 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.62 | 0.33 | -0.29 | |||
44 | AT3G49390 | CTC-interacting domain 10 | CTC-interacting domain 10 | -0.61 | 0.31 | -0.33 | ||
45 | AT2G27285 | Coiled-coil domain-containing protein 55 (DUF2040) | -0.61 | 0.33 | -0.32 | |||
46 | AT2G13560 | NAD-dependent malic enzyme 1 | NAD-dependent malic enzyme 1 | -0.61 | 0.29 | -0.33 | ||
47 | AT1G17090 | unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; Has 5 Blast hits to 5 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.61 | 0.32 | -0.31 | |||
48 | AT5G42390 | Insulinase (Peptidase family M16) family protein | stromal processing peptidase | -0.61 | 0.29 | -0.31 | ||
49 | AT5G50915 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
0.61 | 0.32 | -0.33 | |||
50 | AT5G22950 | SNF7 family protein | VPS24.1 | -0.61 | 0.33 | -0.32 | ||
51 | AT5G40460 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27630.1); Has 87 Blast hits to 87 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.6 | 0.33 | -0.34 | |||
52 | AT5G54110 | membrane-associated mannitol-induced | membrane-associated mannitol-induced, membrane-associated mannitol-induced |
-0.6 | 0.33 | -0.33 | ||
53 | AT2G41740 | villin 2 | ATVLN2, villin 2 | -0.6 | 0.33 | -0.32 | ||
54 | AT1G03250 | unknown protein; Has 89 Blast hits to 89 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 31; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). |
-0.6 | 0.31 | -0.32 | |||
55 | AT1G14480 | Ankyrin repeat family protein | 0.6 | 0.3 | -0.32 | |||
56 | AT1G31730 | Adaptin family protein | -0.6 | 0.32 | -0.3 | |||
57 | AT2G16740 | ubiquitin-conjugating enzyme 29 | ubiquitin-conjugating enzyme 29 | -0.6 | 0.32 | -0.29 | ||
58 | AT5G59080 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.6 | 0.3 | -0.3 | |||
59 | AT5G62770 | Protein of unknown function (DUF1645) | 0.6 | 0.3 | -0.32 | |||
60 | AT3G11270 | Mov34/MPN/PAD-1 family protein | maternal effect embryo arrest 34 | -0.59 | 0.33 | -0.32 | ||
61 | AT1G19200 | Protein of unknown function (DUF581) | -0.59 | 0.3 | -0.31 | |||
62 | AT3G54000 | CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP022260 (InterPro:IPR016802); Has 94 Blast hits to 94 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.59 | 0.31 | -0.3 | |||
63 | AT4G36550 | ARM repeat superfamily protein | 0.59 | 0.33 | -0.31 | |||
64 | AT3G05170 | Phosphoglycerate mutase family protein | -0.59 | 0.31 | -0.31 | |||
65 | AT4G03820 | Protein of unknown function (DUF3537) | -0.58 | 0.32 | -0.33 | |||
66 | AT4G28710 | Myosin family protein with Dil domain | MYOSIN XI H, XIH | -0.58 | 0.31 | -0.32 | ||
67 | AT1G70330 | equilibrative nucleotide transporter 1 | equilibrative nucleotide transporter 1, equilibrative nucleotide transporter 1 |
-0.58 | 0.3 | -0.29 | ||
68 | AT3G57020 | Calcium-dependent phosphotriesterase superfamily protein | -0.58 | 0.31 | -0.3 | |||
69 | AT3G06080 | Plant protein of unknown function (DUF828) | TRICHOME BIREFRINGENCE-LIKE 10 | 0.58 | 0.3 | -0.32 | ||
70 | AT5G40930 | translocase of outer membrane 20-4 | translocase of outer membrane 20-4 | -0.58 | 0.32 | -0.33 | ||
71 | AT5G41170 | Pentatricopeptide repeat (PPR-like) superfamily protein | -0.58 | 0.31 | -0.3 | |||
72 | AT1G31350 | KAR-UP F-box 1 | KAR-UP F-box 1 | 0.58 | 0.32 | -0.37 | ||
73 | AT1G56510 | Disease resistance protein (TIR-NBS-LRR class) | ACTIVATED DISEASE RESISTANCE 2, WHITE RUST RESISTANCE 4 |
0.58 | 0.31 | -0.31 | ||
74 | AT1G73670 | MAP kinase 15 | MAP kinase 15, MAP kinase 15 | -0.57 | 0.31 | -0.33 | ||
75 | AT1G03620 | ELMO/CED-12 family protein | 0.57 | 0.31 | -0.3 | |||
76 | AT1G79640 | Protein kinase superfamily protein | 0.57 | 0.32 | -0.3 | |||
77 | AT5G58120 | Disease resistance protein (TIR-NBS-LRR class) family | 0.57 | 0.32 | -0.29 | |||
78 | AT5G60230 | splicing endonuclease 2 | SPLICING ENDONUCLEASE 2, splicing endonuclease 2 |
0.57 | 0.31 | -0.31 | ||
79 | AT4G35985 | Senescence/dehydration-associated protein-related | 0.56 | 0.33 | -0.33 | |||
80 | AT2G44830 | Protein kinase superfamily protein | 0.55 | 0.3 | -0.3 | |||
81 | AT3G57930 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G42190.1); Has 1519 Blast hits to 1241 proteins in 182 species: Archae - 0; Bacteria - 60; Metazoa - 576; Fungi - 133; Plants - 127; Viruses - 30; Other Eukaryotes - 593 (source: NCBI BLink). |
0.54 | 0.3 | -0.32 | |||
82 | AT4G38940 | Galactose oxidase/kelch repeat superfamily protein | 0.54 | 0.34 | -0.31 | |||
83 | AT4G04630 | Protein of unknown function, DUF584 | 0.54 | 0.31 | -0.34 | |||
84 | AT4G03940 | unknown protein; Has 8 Blast hits to 8 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
0.53 | 0.31 | -0.32 | |||
85 | AT3G49370 | Calcium-dependent protein kinase (CDPK) family protein | 0.53 | 0.31 | -0.32 | |||
86 | AT2G01660 | plasmodesmata-located protein 6 | plasmodesmata-located protein 6 | 0.53 | 0.3 | -0.3 | ||
87 | AT2G29660 | zinc finger (C2H2 type) family protein | 0.53 | 0.29 | -0.31 | |||
88 | AT4G19660 | NPR1-like protein 4 | ATNPR4, NPR1-like protein 4 | 0.52 | 0.32 | -0.3 | ||
89 | AT2G30280 | RNA-directed DNA methylation 4 | DEFECTIVE IN MERISTEM SILENCING 4, RNA-directed DNA methylation 4 |
0.52 | 0.33 | -0.3 | ||
90 | AT4G23496 | SPIRAL1-like5 | SPIRAL1-like5 | 0.52 | 0.32 | -0.33 | ||
91 | AT4G27350 | Protein of unknown function (DUF1223) | 0.52 | 0.29 | -0.33 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
92 | C0149 | Mevalonolactone | D,L-Mevalonolactone | - | terpenoid biosynthesis | -0.65 | 0.42 | -0.45 | ||
93 | C0233 | Sinapinic acid | - | cis-Sinapinate; Sinapate | ferulate and sinapate biosynthesis, sinapate ester biosynthesis, free phenylpropanoid acid biosynthesis |
-0.63 | 0.45 | -0.46 | ||
94 | C0091 | Fructose-1,6-bisphosphate | D-Fructose-1,6-bisphosphate | Fructose-1,6-bisphosphate | gluconeogenesis I, Calvin-Benson-Bassham cycle, glycolysis IV (plant cytosol), glycolysis I, CA1P biosynthesis, sucrose biosynthesis I |
-0.62 | 0.44 | -0.45 | ||
95 | C0187 | Neoeriocitrin | - | - | - | 0.53 | 0.44 | -0.45 |