AT4G39220 : ATRER1A
Query Information
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AGICode AT4G39220
Description Rer1 family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G39220 Rer1 family protein ATRER1A 1 0.32 -0.31
2 AT2G36300 Integral membrane Yip1 family protein 0.83 0.34 -0.31
3 AT1G52730 Transducin/WD40 repeat-like superfamily protein 0.83 0.32 -0.32
4 AT4G39820 Tetratricopeptide repeat (TPR)-like superfamily protein 0.82 0.32 -0.29
5 AT5G40770 prohibitin 3 prohibitin 3, prohibitin 3 0.81 0.32 -0.33
6 AT1G05410 Protein of unknown function (DUF1423) 0.8 0.3 -0.3
7 AT4G26210 Mitochondrial ATP synthase subunit G protein 0.8 0.31 -0.29
8 AT2G30260 U2 small nuclear ribonucleoprotein B U2 small nuclear ribonucleoprotein
B		 0.79 0.3 -0.34
9 AT1G30580 GTP binding 0.79 0.32 -0.32
10 AT5G14105 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.79 0.31 -0.31
11 AT2G26990 proteasome family protein ATCSN2, CONSTITUTIVE
PHOTOMORPHOGENIC 12, CSN2, FUSCA
12		 0.79 0.31 -0.32
12 AT3G57360 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G02370.2); Has 122 Blast hits
to 122 proteins in 54 species: Archae - 0; Bacteria - 0;
Metazoa - 74; Fungi - 4; Plants - 41; Viruses - 0; Other
Eukaryotes - 3 (source: NCBI BLink).		 0.78 0.31 -0.32
13 AT3G19630 Radical SAM superfamily protein 0.78 0.33 -0.31
14 AT3G51830 SAC domain-containing protein 8 ATG5, SAC domain-containing
protein 8		 -0.78 0.32 -0.31
15 AT2G35790 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1301 (InterPro:IPR009724); Has 116
Blast hits to 116 proteins in 49 species: Archae - 0;
Bacteria - 0; Metazoa - 53; Fungi - 6; Plants - 49; Viruses
- 0; Other Eukaryotes - 8 (source: NCBI BLink).		 0.78 0.31 -0.33
16 AT3G04780 Protein of unknown function (DUF1000) 0.78 0.33 -0.32
17 AT1G03070 Bax inhibitor-1 family protein -0.78 0.32 -0.31
18 AT5G19680 Leucine-rich repeat (LRR) family protein 0.78 0.29 -0.33
19 AT1G26750 unknown protein; Has 44 Blast hits to 44 proteins in 16
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.78 0.32 -0.29
20 AT4G28540 casein kinase I-like 6 casein kinase I-like 6, PAPK1 0.78 0.32 -0.3
21 AT3G25730 ethylene response DNA binding factor 3 ethylene response DNA binding
factor 3		 0.77 0.35 -0.34
22 AT5G13780 Acyl-CoA N-acyltransferases (NAT) superfamily protein 0.77 0.34 -0.33
23 AT1G20200 PAM domain (PCI/PINT associated module) protein EMBRYO DEFECTIVE 2719, HAPLESS 15 0.77 0.33 -0.3
24 AT4G34450 coatomer gamma-2 subunit, putative / gamma-2 coat protein,
putative / gamma-2 COP, putative		 0.77 0.32 -0.33
25 AT1G62730 Terpenoid synthases superfamily protein 0.76 0.3 -0.31
26 AT1G12650 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF947 (InterPro:IPR009292); Has 700 Blast
hits to 631 proteins in 192 species: Archae - 0; Bacteria -
32; Metazoa - 138; Fungi - 168; Plants - 60; Viruses - 0;
Other Eukaryotes - 302 (source: NCBI BLink).		 0.76 0.3 -0.32
27 AT5G18800 Cox19-like CHCH family protein 0.76 0.3 -0.31
28 AT2G36320 A20/AN1-like zinc finger family protein 0.75 0.32 -0.3
29 AT1G08220 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
mitochondrial proton-transporting ATP synthase complex
assembly; LOCATED IN: mitochondrial inner membrane;
EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7
growth stages; CONTAINS InterPro DOMAIN/s: ATPase assembly
factor ATP10, mitochondria (InterPro:IPR007849); Has 168
Blast hits to 168 proteins in 86 species: Archae - 6;
Bacteria - 0; Metazoa - 2; Fungi - 107; Plants - 30;
Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink).		 0.75 0.34 -0.32
30 AT1G71730 unknown protein; Has 52 Blast hits to 52 proteins in 24
species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0;
Plants - 41; Viruses - 0; Other Eukaryotes - 7 (source:
NCBI BLink).		 0.75 0.31 -0.33
31 AT3G49320 Metal-dependent protein hydrolase 0.75 0.32 -0.33
32 AT5G06410 DNAJ heat shock N-terminal domain-containing protein 0.75 0.34 -0.3
33 AT1G77440 20S proteasome beta subunit C2 20S proteasome beta subunit C2 0.75 0.3 -0.35
34 AT4G34560 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G66440.1); Has 67 Blast hits
to 66 proteins in 11 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.75 0.34 -0.33
35 AT1G43860 sequence-specific DNA binding transcription factors 0.74 0.34 -0.31
36 AT4G31340 myosin heavy chain-related 0.74 0.33 -0.31
37 AT4G01320 Peptidase family M48 family protein ATSTE24, STE24 0.74 0.3 -0.32
38 AT3G51100 unknown protein; Has 48 Blast hits to 48 proteins in 16
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.74 0.31 -0.3
39 AT5G07890 myosin heavy chain-related -0.74 0.34 -0.33
40 AT5G20570 RING-box 1 RING-BOX 1, HRT1, RING-box 1,
REGULATOR OF CULLINS-1		 0.74 0.33 -0.33
41 AT5G62290 nucleotide-sensitive chloride conductance regulator (ICln)
family protein		 0.74 0.31 -0.31
42 AT4G09570 calcium-dependent protein kinase 4 ATCPK4, calcium-dependent protein
kinase 4		 0.74 0.33 -0.3
43 AT1G04750 vesicle-associated membrane protein 721 AT VAMP7B, ATVAMP721,
vesicle-associated membrane
protein 721, VESICLE-ASSOCIATED
MEMBRANE PROTEIN 7B		 0.73 0.3 -0.32
44 AT1G16740 Ribosomal protein L20 0.73 0.32 -0.31
45 AT3G05500 Rubber elongation factor protein (REF) 0.73 0.33 -0.33
46 AT5G20500 Glutaredoxin family protein 0.73 0.28 -0.33
47 AT5G57080 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 13 plant structures;
EXPRESSED DURING: 7 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT4G26055.1); Has 14 Blast hits to 14 proteins in 6
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.73 0.31 -0.29
48 AT2G47970 Nuclear pore localisation protein NPL4 0.73 0.3 -0.32
49 AT3G19980 flower-specific, phytochrome-associated protein phosphatase
3		 flower-specific,
phytochrome-associated protein
phosphatase 3, EMBRYO DEFECTIVE
2736, flower-specific,
phytochrome-associated protein
phosphatase 3, SERINE/THREONINE
PROTEIN PHOSPHATASE		 0.73 0.32 -0.31
50 AT1G28210 DNAJ heat shock family protein ATJ1 0.72 0.32 -0.32
51 AT5G27820 Ribosomal L18p/L5e family protein 0.72 0.31 -0.33
52 AT5G13770 Pentatricopeptide repeat (PPR-like) superfamily protein -0.72 0.3 -0.31
53 AT1G22200 Endoplasmic reticulum vesicle transporter protein 0.72 0.32 -0.32
54 AT3G51580 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 25 plant structures;
EXPRESSED DURING: 15 growth stages; Has 1768 Blast hits to
1607 proteins in 294 species: Archae - 2; Bacteria - 552;
Metazoa - 381; Fungi - 236; Plants - 306; Viruses - 38;
Other Eukaryotes - 253 (source: NCBI BLink).		 0.72 0.32 -0.31
55 AT4G03120 C2H2 and C2HC zinc fingers superfamily protein 0.72 0.3 -0.33
56 AT4G10810 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G24026.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.72 0.31 -0.32
57 AT3G14290 20S proteasome alpha subunit E2 20S proteasome alpha subunit E2 0.72 0.33 -0.32
58 AT3G12130 KH domain-containing protein / zinc finger (CCCH type)
family protein		 0.72 0.29 -0.35
59 AT1G30480 D111/G-patch domain-containing protein DNA-DAMAGE-REPAIR/TOLERATION
PROTEIN 111		 0.72 0.32 -0.33
60 AT3G46060 RAB GTPase homolog 8A ARA-3, ARA3, RAB GTPase homolog
8A, ATRABE1C, RAB GTPase homolog
8A, RABE1c		 0.71 0.31 -0.32
61 AT4G31080 Protein of unknown function (DUF2296) 0.71 0.31 -0.32
62 AT1G80310 sulfate transmembrane transporters molybdate transporter 2 -0.71 0.32 -0.32
63 AT4G39390 nucleotide sugar transporter-KT 1 A. THALIANA NUCLEOTIDE SUGAR
TRANSPORTER-KT 1, nucleotide sugar
transporter-KT 1		 0.71 0.33 -0.32
64 AT3G15940 UDP-Glycosyltransferase superfamily protein -0.71 0.3 -0.3
65 AT4G22200 potassium transport 2/3 AKT2, potassium transport 2/3,
AKT3, potassium transport 2/3		 -0.71 0.31 -0.3
66 AT3G28200 Peroxidase superfamily protein 0.71 0.3 -0.31
67 AT3G15060 RAB GTPase homolog A1G RAB GTPase homolog A1G, RAB GTPase
homolog A1G		 0.71 0.32 -0.32
68 AT5G04870 calcium dependent protein kinase 1 ATCPK1, calcium dependent protein
kinase 1		 0.71 0.32 -0.31
69 AT1G05270 TraB family protein 0.71 0.31 -0.31
70 AT3G46440 UDP-XYL synthase 5 UDP-XYL synthase 5 0.71 0.32 -0.31
71 AT1G17890 NAD(P)-binding Rossmann-fold superfamily protein GER2 0.71 0.31 -0.29
72 AT1G50950 Thioredoxin protein with domain of unknown function
(DUF1692)		 -0.71 0.32 -0.3
73 AT4G37190 LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 20
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Beta tubulin, autoregulation
binding site (InterPro:IPR013838), Misato Segment II,
myosin-like (InterPro:IPR019605), Tubulin/FtsZ, N-terminal
(InterPro:IPR019746); Has 345 Blast hits to 341 proteins in
161 species: Archae - 0; Bacteria - 0; Metazoa - 131; Fungi
- 140; Plants - 55; Viruses - 0; Other Eukaryotes - 19
(source: NCBI BLink).		 0.7 0.32 -0.33
74 AT2G37550 ARF-GAP domain 7 ARF-GAP domain 7, yeast pde1
suppressor 1		 0.7 0.31 -0.31
75 AT3G43510 transposable element gene 0.7 0.31 -0.33
76 AT1G59830 protein phosphatase 2A-2 protein phosphatase 2A-2 0.7 0.32 -0.33
77 AT5G03340 ATPase, AAA-type, CDC48 protein 0.7 0.29 -0.32
78 AT3G01210 RNA-binding (RRM/RBD/RNP motifs) family protein -0.7 0.34 -0.32
79 AT5G25800 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 0.7 0.3 -0.31
80 AT1G73170 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.7 0.31 -0.32
81 AT5G18400 Cytokine-induced anti-apoptosis inhibitor 1, Fe-S
biogenesis		 0.7 0.3 -0.3
82 AT1G26580 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: ELM2 domain-containing protein
(TAIR:AT2G03470.1); Has 161 Blast hits to 161 proteins in
17 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi -
4; Plants - 156; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.7 0.32 -0.32
83 AT3G05530 regulatory particle triple-A ATPase 5A ATS6A.2, regulatory particle
triple-A ATPase 5A		 0.7 0.3 -0.3
84 AT2G22980 serine carboxypeptidase-like 13 serine carboxypeptidase-like 13 -0.69 0.3 -0.32
85 AT5G16490 ROP-interactive CRIB motif-containing protein 4 ROP-interactive CRIB
motif-containing protein 4		 -0.69 0.31 -0.33
86 AT1G57943 purine permease 17 purine permease 17, purine
permease 17		 -0.69 0.31 -0.32
87 AT4G18395 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.69 0.28 -0.32
88 AT4G13810 receptor like protein 47 receptor like protein 47, receptor
like protein 47		 -0.69 0.32 -0.33
89 AT5G43840 heat shock transcription factor A6A heat shock transcription factor
A6A, heat shock transcription
factor A6A		 -0.68 0.3 -0.31
90 AT2G19550 alpha/beta-Hydrolases superfamily protein -0.68 0.31 -0.31
91 AT2G35310 Transcriptional factor B3 family protein -0.68 0.32 -0.28
92 AT1G47280 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 9 plant structures;
EXPRESSED DURING: L mature pollen stage, M germinated
pollen stage, 4 anthesis, C globular stage, petal
differentiation and expansion stage; Has 6 Blast hits to 6
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.68 0.32 -0.32
93 AT2G25690 Protein of unknown function (DUF581) -0.67 0.33 -0.33
94 AT5G22700 F-box/RNI-like/FBD-like domains-containing protein -0.67 0.31 -0.32
95 AT2G15080 receptor like protein 19 receptor like protein 19, receptor
like protein 19		 -0.67 0.29 -0.31
96 AT4G10060 Beta-glucosidase, GBA2 type family protein -0.67 0.3 -0.32
97 AT4G30993 Calcineurin-like metallo-phosphoesterase superfamily
protein		 -0.67 0.3 -0.3
98 AT1G16710 histone acetyltransferase of the CBP family 12 histone acetyltransferase of the
CBP family 12		 -0.67 0.32 -0.29
99 AT1G26150 proline-rich extensin-like receptor kinase 10 proline-rich extensin-like
receptor kinase 10, proline-rich
extensin-like receptor kinase 10		 -0.66 0.33 -0.32
100 AT1G49180 protein kinase family protein -0.66 0.33 -0.32
101 AT1G03270 CBS domain-containing protein with a domain of unknown
function (DUF21)		 -0.66 0.31 -0.31
102 AT1G71050 Heavy metal transport/detoxification superfamily protein heavy metal associated
isoprenylated plant protein 20		 -0.66 0.33 -0.31
103 AT2G24280 alpha/beta-Hydrolases superfamily protein -0.66 0.3 -0.33
104 AT5G53710 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 8 plant structures;
EXPRESSED DURING: 4 anthesis, C globular stage, petal
differentiation and expansion stage; Has 30201 Blast hits
to 17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.65 0.32 -0.34
105 AT5G33280 Voltage-gated chloride channel family protein -0.65 0.32 -0.32
106 AT5G24080 Protein kinase superfamily protein -0.65 0.34 -0.32
107 AT1G76620 Protein of unknown function, DUF547 -0.65 0.33 -0.32
108 AT1G18810 phytochrome kinase substrate-related -0.65 0.32 -0.31
109 AT1G67080 abscisic acid (aba)-deficient 4 abscisic acid (ABA)-deficient 4 -0.64 0.28 -0.33
110 AT5G62800 Protein with RING/U-box and TRAF-like domains -0.64 0.32 -0.32
111 AT4G04970 glucan synthase-like 1 GLUCAN SYNTHASE LIKE 1, GLUCAN
SYNTHASE LIKE-1, GSL01, glucan
synthase-like 1		 -0.64 0.31 -0.31
112 AT3G22490 Seed maturation protein -0.64 0.34 -0.33
113 AT4G17360 Formyl transferase -0.64 0.34 -0.31
114 AT5G47800 Phototropic-responsive NPH3 family protein -0.64 0.29 -0.32
115 AT3G43100 transposable element gene -0.63 0.3 -0.32
116 AT5G46400 Tetratricopeptide repeat (TPR)-like superfamily protein AT PRP39-2, PRP39-2 -0.63 0.31 -0.34
117 AT4G13150 unknown protein; Has 83 Blast hits to 82 proteins in 37
species: Archae - 0; Bacteria - 51; Metazoa - 0; Fungi - 0;
Plants - 30; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.63 0.32 -0.31
118 AT4G01280 Homeodomain-like superfamily protein -0.63 0.31 -0.32
119 AT1G34480 Cysteine/Histidine-rich C1 domain family protein -0.63 0.33 -0.31
120 AT2G40210 AGAMOUS-like 48 AGAMOUS-like 48 -0.63 0.31 -0.33
121 AT2G42560 late embryogenesis abundant domain-containing protein / LEA
domain-containing protein		 -0.63 0.33 -0.3
122 AT3G58450 Adenine nucleotide alpha hydrolases-like superfamily
protein		 -0.63 0.32 -0.31
123 AT3G01370 CRM family member 2 Arabidopsis thaliana CRM family
member 2, CRM family member 2		 -0.62 0.3 -0.33
124 AT5G05220 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.62 0.32 -0.32
125 AT3G11620 alpha/beta-Hydrolases superfamily protein -0.62 0.33 -0.32
126 AT3G09410 Pectinacetylesterase family protein -0.62 0.32 -0.34
127 AT1G77680 Ribonuclease II/R family protein -0.62 0.33 -0.33
128 AT1G19485 Transducin/WD40 repeat-like superfamily protein -0.62 0.32 -0.28
129 AT1G01310 CAP (Cysteine-rich secretory proteins, Antigen 5, and
Pathogenesis-related 1 protein) superfamily protein		 -0.62 0.31 -0.31
130 AT2G37880 Protein of unknown function, DUF617 -0.62 0.33 -0.32
131 AT5G26190 Cysteine/Histidine-rich C1 domain family protein -0.62 0.31 -0.34
132 AT2G07110 BEST Arabidopsis thaliana protein match is: Ribosomal
protein S5 domain 2-like superfamily protein
(TAIR:AT3G46210.6); Has 82 Blast hits to 82 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2;
Plants - 75; Viruses - 0; Other Eukaryotes - 5 (source:
NCBI BLink).		 -0.62 0.31 -0.34
133 AT4G32270 Ubiquitin-like superfamily protein -0.62 0.3 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
134 C0177 MST_2429.6 - - - -0.7 0.45 -0.44
135 C0030 3-Methylsulfinyl-n-propylglucosinolate - 3-Methylsulfinylpropyl-glucosinolate glucosinolate biosynthesis from homomethionine -0.67 0.45 -0.44 C0030