AT4G39100 : short life
Query Information
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AGICode AT4G39100
Description PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G39100 PHD finger family protein / bromo-adjacent homology (BAH)
domain-containing protein		 short life 1 0.31 -0.33
2 AT4G10330 glycine-rich protein 0.79 0.31 -0.32
3 AT3G14050 RELA/SPOT homolog 2 RELA-SPOT HOMOLOG 2, RELA/SPOT
HOMOLOG 2, RELA/SPOT homolog 2		 0.79 0.3 -0.3
4 AT1G21760 F-box protein 7 F-BOX PROTEIN 7, F-box protein 7 0.78 0.31 -0.29
5 AT2G19830 SNF7 family protein SNF7.2, VPS32 0.78 0.29 -0.33
6 AT1G05610 ADP-glucose pyrophosphorylase small subunit 2 ADP-glucose pyrophosphorylase
small subunit 2		 0.78 0.31 -0.32
7 AT3G59290 ENTH/VHS family protein 0.77 0.32 -0.32
8 AT3G10210 SEC14 cytosolic factor family protein / phosphoglyceride
transfer family protein		 0.77 0.32 -0.34
9 AT1G17250 receptor like protein 3 receptor like protein 3, receptor
like protein 3		 -0.77 0.32 -0.32
10 AT4G27370 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 MYOSIN VIII B, VIIIB -0.77 0.3 -0.33
11 AT1G04050 homolog of SU(var)3-9 1 SET DOMAIN PROTEIN 13, homolog of
SU(var)3-9 1		 -0.76 0.34 -0.31
12 AT1G73030 SNF7 family protein CHARGED MULTIVESICULAR BODY
PROTEIN/CHROMATIN MODIFYING
PROTEIN1A, VPS46.2		 0.76 0.33 -0.3
13 AT3G06760 Drought-responsive family protein 0.75 0.34 -0.31
14 AT1G64360 unknown protein; Has 6 Blast hits to 6 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.75 0.31 -0.33
15 AT1G02050 Chalcone and stilbene synthase family protein LESS ADHESIVE POLLEN 6 -0.75 0.31 -0.31
16 AT1G16490 myb domain protein 58 MYB DOMAIN PROTEIN 58, myb domain
protein 58		 0.75 0.34 -0.29
17 AT3G12160 RAB GTPase homolog A4D ARABIDOPSIS THALIANA RAB GTPASE
HOMOLOG A4D, RAB GTPase homolog
A4D		 -0.74 0.31 -0.33
18 AT3G17100 sequence-specific DNA binding transcription factors 0.74 0.31 -0.34
19 AT5G49620 myb domain protein 78 myb domain protein 78, myb domain
protein 78		 0.74 0.29 -0.31
20 AT3G42320 transposable element gene -0.74 0.31 -0.32
21 AT3G23280 XB3 ortholog 5 in Arabidopsis thaliana XB3 ortholog 5 in Arabidopsis
thaliana		 0.73 0.32 -0.32
22 AT3G57900 unknown protein; Has 22 Blast hits to 22 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.73 0.34 -0.3
23 AT1G45976 S-ribonuclease binding protein 1 S-ribonuclease binding protein 1 0.73 0.31 -0.32
24 AT1G23260 MMS ZWEI homologue 1 MMS ZWEI homologue 1, UBIQUITIN E2
VARIANT 1A		 0.73 0.31 -0.31
25 AT4G16680 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.73 0.3 -0.32
26 AT1G69470 unknown protein; Has 6 Blast hits to 6 proteins in 3
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.73 0.29 -0.31
27 AT3G27000 actin related protein 2 actin related protein 2, ACTIN
RELATED PROTEIN 2, WURM		 0.73 0.32 -0.31
28 AT2G47790 Transducin/WD40 repeat-like superfamily protein -0.73 0.32 -0.31
29 AT5G28700 transposable element gene -0.73 0.34 -0.31
30 AT4G37170 Pentatricopeptide repeat (PPR) superfamily protein -0.72 0.32 -0.3
31 AT1G54210 Ubiquitin-like superfamily protein AUTOPHAGY 12, ATATG12, AUTOPHAGY
12 A		 0.72 0.29 -0.27
32 AT2G30780 Tetratricopeptide repeat (TPR)-like superfamily protein -0.72 0.31 -0.32
33 AT2G17350 unknown protein; Has 119 Blast hits to 93 proteins in 40
species: Archae - 0; Bacteria - 3; Metazoa - 18; Fungi -
12; Plants - 44; Viruses - 0; Other Eukaryotes - 42
(source: NCBI BLink).		 0.72 0.32 -0.31
34 AT1G77770 Protein of unknown function (DUF1644) 0.72 0.31 -0.35
35 AT1G14400 ubiquitin carrier protein 1 ATUBC1, ubiquitin carrier protein
1, UBIQUITIN CONJUGATING ENZYME 1		 0.72 0.31 -0.32
36 AT1G17744 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: stem; Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.72 0.33 -0.34
37 AT1G09080 Heat shock protein 70 (Hsp 70) family protein binding protein 3 0.72 0.32 -0.33
38 AT2G29410 metal tolerance protein B1 ATMTPB1, metal tolerance protein
B1		 0.72 0.35 -0.3
39 AT3G51500 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 23 Blast hits to 23 proteins
in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.72 0.32 -0.31
40 AT2G20740 Tetraspanin family protein 0.72 0.33 -0.29
41 AT5G07270 XB3 ortholog 3 in Arabidopsis thaliana XB3 ortholog 3 in Arabidopsis
thaliana		 0.71 0.31 -0.31
42 AT5G37380 Chaperone DnaJ-domain superfamily protein 0.71 0.3 -0.31
43 AT1G74600 pentatricopeptide (PPR) repeat-containing protein organelle transcript processing 87 -0.71 0.32 -0.29
44 AT1G32630 unknown protein; Has 18 Blast hits to 18 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2;
Plants - 12; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.71 0.33 -0.32
45 AT3G43040 transposable element gene 0.71 0.33 -0.31
46 AT1G20750 RAD3-like DNA-binding helicase protein 0.71 0.31 -0.33
47 AT1G09060 Zinc finger, RING-type;Transcription factor
jumonji/aspartyl beta-hydroxylase		 0.7 0.32 -0.29
48 AT3G25950 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing
protein		 -0.7 0.31 -0.32
49 AT1G77820 transposable element gene -0.7 0.32 -0.33
50 AT2G42410 zinc finger protein 11 ZINC FINGER PROTEIN 11, zinc
finger protein 11		 -0.7 0.32 -0.32
51 AT3G05540 Methionine sulfoxide reductase (MSS4-like) family protein 0.7 0.3 -0.31
52 AT5G66160 receptor homology region transmembrane domain ring H2 motif
protein 1		 ARABIDOPSIS THALIANA RECEPTOR
HOMOLOGY REGION TRANSMEMBRANE
DOMAIN RING H2 MOTIF PROTEIN 1,
receptor homology region
transmembrane domain ring H2 motif
protein 1		 0.7 0.33 -0.32
53 AT1G18340 basal transcription factor complex subunit-related -0.7 0.33 -0.33
54 AT3G59950 Peptidase family C54 protein 0.7 0.29 -0.3
55 AT3G18040 MAP kinase 9 MAP kinase 9 0.7 0.33 -0.29
56 AT3G10590 Duplicated homeodomain-like superfamily protein 0.7 0.31 -0.32
57 AT1G48620 high mobility group A5 high mobility group A5 0.7 0.31 -0.31
58 AT1G26300 BSD domain-containing protein 0.7 0.32 -0.32
59 AT5G61500 autophagy 3 (APG3) ATATG3, ATG3 0.7 0.32 -0.32
60 AT1G04880 HMG (high mobility group) box protein with ARID/BRIGHT
DNA-binding domain		 -0.7 0.32 -0.31
61 AT5G62120 response regulator 23 response regulator 23, response
regulator 23		 -0.7 0.31 -0.32
62 AT3G29670 HXXXD-type acyl-transferase family protein phenolic glucoside
malonyltransferase 2		 0.7 0.34 -0.3
63 AT4G18530 Protein of unknown function (DUF707) 0.7 0.32 -0.31
64 AT2G28250 Protein kinase superfamily protein NCRK -0.69 0.32 -0.32
65 AT3G12480 nuclear factor Y, subunit C11 nuclear factor Y, subunit C11 0.69 0.33 -0.31
66 AT3G10620 nudix hydrolase homolog 26 nudix hydrolase homolog 26, nudix
hydrolase homolog 26		 0.69 0.29 -0.32
67 AT1G47765 F-box and associated interaction domains-containing protein 0.69 0.3 -0.33
68 AT1G55280 Lipase/lipooxygenase, PLAT/LH2 family protein 0.69 0.33 -0.33
69 AT3G52820 purple acid phosphatase 22 PURPLE ACID PHOSPHATASE 22, purple
acid phosphatase 22		 0.69 0.32 -0.31
70 AT5G48370 Thioesterase/thiol ester dehydrase-isomerase superfamily
protein		 0.69 0.28 -0.31
71 AT3G49740 Tetratricopeptide repeat (TPR)-like superfamily protein -0.69 0.32 -0.3
72 AT4G24950 unknown protein; Has 4 Blast hits to 4 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.69 0.33 -0.3
73 AT3G21800 UDP-glucosyl transferase 71B8 UDP-glucosyl transferase 71B8 -0.69 0.32 -0.31
74 AT3G61940 Cation efflux family protein ATMTPA1, MTPA1 -0.69 0.32 -0.31
75 AT3G10800 Basic-leucine zipper (bZIP) transcription factor family
protein		 BZIP28 0.69 0.33 -0.33
76 AT1G78470 BEST Arabidopsis thaliana protein match is: F-box family
protein (TAIR:AT1G67390.1); Has 40 Blast hits to 40
proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.69 0.3 -0.31
77 AT1G17930 Aminotransferase-like, plant mobile domain family protein 0.69 0.31 -0.29
78 AT3G14070 cation exchanger 9 CATION CALCIUM EXCHANGER 3, cation
exchanger 9, CATION CALCIUM
EXCHANGER 3		 0.69 0.31 -0.32
79 AT1G02320 unknown protein; Has 0 Blast hits to 0 proteins in 0
species (source: NCBI BLink).		 0.69 0.34 -0.32
80 AT3G45830 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G02290.1); Has 499 Blast hits to 438 proteins in
100 species: Archae - 0; Bacteria - 7; Metazoa - 236; Fungi
- 15; Plants - 108; Viruses - 2; Other Eukaryotes - 131
(source: NCBI BLink).		 0.69 0.33 -0.31
81 AT3G58640 Mitogen activated protein kinase kinase kinase-related 0.69 0.33 -0.33
82 AT3G52120 SWAP (Suppressor-of-White-APricot)/surp domain-containing
protein / D111/G-patch domain-containing protein		 0.69 0.31 -0.32
83 AT3G24280 small acidic protein 2 small acidic protein 2 -0.69 0.28 -0.31
84 AT2G29600 Galactose oxidase/kelch repeat superfamily protein 0.68 0.31 -0.31
85 AT5G65540 unknown protein; Has 6825 Blast hits to 3811 proteins in
289 species: Archae - 0; Bacteria - 184; Metazoa - 2139;
Fungi - 760; Plants - 816; Viruses - 52; Other Eukaryotes -
2874 (source: NCBI BLink).		 0.68 0.32 -0.3
86 AT3G27560 Protein kinase superfamily protein ATN1 0.68 0.32 -0.35
87 AT1G04050 homolog of SU(var)3-9 1 SET DOMAIN PROTEIN 13, homolog of
SU(var)3-9 1		 -0.68 0.3 -0.33
88 AT5G10950 Tudor/PWWP/MBT superfamily protein 0.68 0.32 -0.33
89 AT5G13570 decapping 2 ATDCP2, decapping 2, TRIDENT 0.68 0.32 -0.3
90 AT1G73640 RAB GTPase homolog A6A RAB GTPase homolog A6A, RAB GTPase
homolog A6A		 -0.68 0.3 -0.28
91 AT3G43670 Copper amine oxidase family protein -0.68 0.29 -0.31
92 AT5G19480 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G12230.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.68 0.32 -0.33
93 AT1G14020 O-fucosyltransferase family protein -0.68 0.32 -0.31
94 AT1G61390 S-locus lectin protein kinase family protein -0.68 0.34 -0.3
95 AT3G61350 SKP1 interacting partner 4 SKP1 interacting partner 4 0.68 0.33 -0.3
96 AT2G21910 cytochrome P450, family 96, subfamily A, polypeptide 5 cytochrome P450, family 96,
subfamily A, polypeptide 5		 0.68 0.32 -0.33
97 AT2G11590 transposable element gene -0.68 0.34 -0.32
98 AT5G48300 ADP glucose pyrophosphorylase 1 ADP glucose pyrophosphorylase 1,
ADP-GLUCOSE PYROPHOSPHORYLASE
SMALL SUBUNIT 1		 0.68 0.32 -0.34
99 AT3G01400 ARM repeat superfamily protein 0.68 0.3 -0.31
100 AT2G33700 Protein phosphatase 2C family protein 0.68 0.36 -0.31
101 AT5G23000 myb domain protein 37 ATMYB37, myb domain protein 37,
REGULATOR OF AXILLARY MERISTEMS 1		 -0.67 0.3 -0.31
102 AT1G04030 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G44040.1); Has 1835 Blast hits
to 1511 proteins in 238 species: Archae - 7; Bacteria -
164; Metazoa - 377; Fungi - 135; Plants - 187; Viruses -
22; Other Eukaryotes - 943 (source: NCBI BLink).		 -0.67 0.31 -0.32
103 AT3G01610 cell division cycle 48C cell division cycle 48C, embryo
defective 1354		 -0.66 0.33 -0.32
104 AT3G53240 receptor like protein 45 receptor like protein 45, receptor
like protein 45		 -0.66 0.31 -0.31
105 AT5G40940 putative fasciclin-like arabinogalactan protein 20 putative fasciclin-like
arabinogalactan protein 20		 -0.66 0.31 -0.3
106 AT4G22120 ERD (early-responsive to dehydration stress) family protein -0.66 0.31 -0.34
107 AT4G04410 transposable element gene -0.66 0.29 -0.31
108 AT5G59600 Tetratricopeptide repeat (TPR)-like superfamily protein -0.66 0.3 -0.31
109 AT4G31760 Peroxidase superfamily protein -0.66 0.32 -0.3
110 AT3G20730 Tetratricopeptide repeat (TPR)-like superfamily protein -0.66 0.33 -0.29
111 AT5G66240 Transducin/WD40 repeat-like superfamily protein -0.66 0.3 -0.32
112 AT1G32610 hydroxyproline-rich glycoprotein family protein -0.66 0.33 -0.3
113 AT5G07820 Plant calmodulin-binding protein-related -0.66 0.32 -0.31
114 AT1G76870 BEST Arabidopsis thaliana protein match is:
sequence-specific DNA binding transcription factors
(TAIR:AT1G21200.1); Has 406 Blast hits to 351 proteins in
76 species: Archae - 0; Bacteria - 2; Metazoa - 137; Fungi
- 14; Plants - 127; Viruses - 0; Other Eukaryotes - 126
(source: NCBI BLink).		 -0.66 0.31 -0.28
115 AT2G38590 F-box and associated interaction domains-containing protein -0.66 0.31 -0.34
116 AT1G43040 SAUR-like auxin-responsive protein family -0.66 0.32 -0.32
117 AT2G11650 transposable element gene -0.65 0.32 -0.3
118 AT3G60730 Plant invertase/pectin methylesterase inhibitor superfamily -0.65 0.32 -0.31
119 AT2G14020 transposable element gene -0.65 0.32 -0.3
120 AT2G19010 GDSL-like Lipase/Acylhydrolase superfamily protein -0.65 0.34 -0.32
121 AT2G29820 Galactose oxidase/kelch repeat superfamily protein -0.65 0.31 -0.32
122 AT2G21480 Malectin/receptor-like protein kinase family protein -0.65 0.32 -0.29
123 AT1G71420 Tetratricopeptide repeat (TPR)-like superfamily protein -0.64 0.31 -0.29
124 AT2G40680 transposable element gene -0.64 0.33 -0.31
125 AT1G04670 unknown protein; Has 40 Blast hits to 40 proteins in 14
species: Archae - 2; Bacteria - 5; Metazoa - 1; Fungi - 2;
Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.64 0.32 -0.33
126 AT1G53660 nodulin MtN21 /EamA-like transporter family protein -0.64 0.31 -0.33
127 AT4G03570 Cystatin/monellin superfamily protein -0.64 0.3 -0.33
128 AT2G40440 BTB/POZ domain-containing protein -0.64 0.3 -0.31
129 AT1G49190 response regulator 19 response regulator 19, response
regulator 19		 -0.64 0.31 -0.32
130 AT3G19870 unknown protein; Has 84 Blast hits to 64 proteins in 35
species: Archae - 0; Bacteria - 0; Metazoa - 31; Fungi - 0;
Plants - 24; Viruses - 0; Other Eukaryotes - 29 (source:
NCBI BLink).		 -0.64 0.35 -0.33
131 AT2G24320 alpha/beta-Hydrolases superfamily protein -0.64 0.32 -0.3
132 AT5G39700 myb domain protein 89 myb domain protein 89, myb domain
protein 89		 -0.63 0.33 -0.32
133 AT5G29070 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: mitochondrion; BEST
Arabidopsis thaliana protein match is: zinc ion
binding;nucleic acid binding (TAIR:AT4G06479.1); Has 5
Blast hits to 5 proteins in 1 species: Archae - 0; Bacteria
- 0; Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.63 0.33 -0.32
134 AT2G45080 cyclin p3;1 cyclin p3;1 -0.63 0.33 -0.29
135 AT3G26320 cytochrome P450, family 71, subfamily B, polypeptide 36 cytochrome P450, family 71,
subfamily B, polypeptide 36		 -0.63 0.32 -0.34
136 AT1G39430 transposable element gene -0.63 0.32 -0.33
137 AT1G33000 transposable element gene -0.63 0.33 -0.29
138 AT2G19070 spermidine hydroxycinnamoyl transferase spermidine hydroxycinnamoyl
transferase		 -0.63 0.32 -0.31
139 AT4G19620 unknown protein; Has 4 Blast hits to 4 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.63 0.32 -0.31
140 AT1G69210 Uncharacterised protein family UPF0090 -0.63 0.32 -0.29
141 AT4G27980 Domain of unknown function (DUF3444) -0.63 0.32 -0.3
142 AT5G27190 transposable element gene -0.63 0.31 -0.31
143 AT3G11640 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G52480.1); Has 36 Blast
hits to 36 proteins in 7 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.63 0.31 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
144 C0028 3-Aminopiperidin-2-one (R,S)-3-Aminopiperidin-2-one - - -0.63 0.29 -0.31