AT4G39140 : -
Query Information
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AGICode AT4G39140
Description RING/U-box superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G39140 RING/U-box superfamily protein 1 0.34 -0.33
2 AT3G06500 Plant neutral invertase family protein alkaline/neutral invertase C 0.77 0.32 -0.32
3 AT1G18250 Pathogenesis-related thaumatin superfamily protein ATLP-1 -0.77 0.32 -0.33
4 AT4G13730 Ypt/Rab-GAP domain of gyp1p superfamily protein 0.77 0.3 -0.32
5 AT1G29060 Target SNARE coiled-coil domain protein 0.76 0.35 -0.32
6 AT5G48310 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G24610.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.75 0.32 -0.33
7 AT2G31350 glyoxalase 2-5 glyoxalase 2-5 0.75 0.3 -0.29
8 AT1G67960 CONTAINS InterPro DOMAIN/s: Membrane protein,Tapt1/CMV
receptor (InterPro:IPR008010); Has 447 Blast hits to 428
proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa
- 190; Fungi - 133; Plants - 49; Viruses - 0; Other
Eukaryotes - 75 (source: NCBI BLink).		 POLLEN DEFECTIVE IN GUIDANCE 1 0.74 0.32 -0.33
9 AT4G39630 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.74 0.27 -0.32
10 AT2G21620 Adenine nucleotide alpha hydrolases-like superfamily
protein		 RD2 0.74 0.3 -0.3
11 AT1G54115 cation calcium exchanger 4 CATION CALCIUM EXCHANGER 4, cation
calcium exchanger 4		 0.74 0.3 -0.33
12 AT1G65580 Endonuclease/exonuclease/phosphatase family protein FRAGILE FIBER3 0.74 0.31 -0.33
13 AT5G11600 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED
DURING: 11 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G19990.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.74 0.33 -0.33
14 AT5G23450 long-chain base (LCB) kinase 1 long-chain base (LCB) kinase 1,
long-chain base (LCB) kinase 1		 0.74 0.35 -0.32
15 AT3G22260 Cysteine proteinases superfamily protein 0.74 0.34 -0.33
16 AT4G05400 copper ion binding -0.73 0.31 -0.32
17 AT2G31820 Ankyrin repeat family protein 0.73 0.35 -0.31
18 AT2G35190 novel plant snare 11 ATNPSN11, novel plant snare 11,
NSPN11		 -0.73 0.34 -0.32
19 AT5G01850 Protein kinase superfamily protein 0.73 0.32 -0.34
20 AT2G01600 ENTH/ANTH/VHS superfamily protein 0.72 0.31 -0.31
21 AT3G54260 TRICHOME BIREFRINGENCE-LIKE 36 TRICHOME BIREFRINGENCE-LIKE 36 -0.72 0.31 -0.32
22 AT1G54150 E3 Ubiquitin ligase family protein 0.72 0.31 -0.31
23 AT2G42110 unknown protein; Has 27 Blast hits to 27 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 25; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.72 0.28 -0.29
24 AT3G58640 Mitogen activated protein kinase kinase kinase-related 0.72 0.33 -0.31
25 AT5G18190 Protein kinase family protein 0.71 0.33 -0.32
26 AT2G15320 Leucine-rich repeat (LRR) family protein 0.71 0.34 -0.32
27 AT1G50490 ubiquitin-conjugating enzyme 20 ubiquitin-conjugating enzyme 20 -0.71 0.33 -0.31
28 AT3G28220 TRAF-like family protein 0.71 0.3 -0.3
29 AT4G37490 CYCLIN B1;1 CYCLIN 1, CYCB1, CYCLIN B1;1 -0.7 0.34 -0.3
30 AT2G37520 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc
finger domain		 0.7 0.3 -0.31
31 AT5G40320 Cysteine/Histidine-rich C1 domain family protein -0.7 0.34 -0.31
32 AT1G30510 root FNR 2 root FNR 2, root FNR 2 -0.7 0.32 -0.33
33 AT3G61710 AUTOPHAGY 6 ATATG6, AtBECLIN1, AUTOPHAGY 6,
BECLIN1		 0.7 0.33 -0.32
34 AT1G01650 SIGNAL PEPTIDE PEPTIDASE-LIKE 4 ARABIDOPSIS THALIANA SIGNAL
PEPTIDE PEPTIDASE-LIKE 4, SIGNAL
PEPTIDE PEPTIDASE-LIKE 4		 0.7 0.33 -0.31
35 AT2G38410 ENTH/VHS/GAT family protein 0.7 0.33 -0.32
36 AT5G62150 peptidoglycan-binding LysM domain-containing protein 0.7 0.33 -0.31
37 AT1G27200 Domain of unknown function (DUF23) 0.7 0.31 -0.31
38 AT5G52580 RabGAP/TBC domain-containing protein 0.69 0.32 -0.32
39 AT5G58670 phospholipase C1 ARABIDOPSIS THALIANA PHOSPHOLIPASE
C, phospholipase C1, phospholipase
C 1, phospholipase C1		 0.69 0.32 -0.33
40 AT1G29400 MEI2-like protein 5 MEI2-like protein 5, MEI2-like
protein 5		 0.68 0.34 -0.34
41 AT1G53050 Protein kinase superfamily protein 0.68 0.31 -0.33
42 AT1G74430 myb domain protein 95 ARABIDOPSIS THALIANA MYB DOMAIN
PROTEIN 95, ARABIDOPSIS THALIANA
MYB DOMAIN CONTAINING PROTEIN 66,
myb domain protein 95		 0.68 0.32 -0.3
43 AT1G70710 glycosyl hydrolase 9B1 glycosyl hydrolase 9B1, CELLULASE
1, glycosyl hydrolase 9B1		 -0.68 0.33 -0.31
44 AT1G31790 Tetratricopeptide repeat (TPR)-like superfamily protein 0.68 0.31 -0.31
45 AT5G23150 Tudor/PWWP/MBT domain-containing protein ENHANCER OF AG-4 2 0.68 0.3 -0.31
46 AT4G28330 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G28340.1); Has 48 Blast hits
to 48 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.68 0.32 -0.33
47 AT1G12080 Vacuolar calcium-binding protein-related -0.68 0.31 -0.31
48 AT2G31955 cofactor of nitrate reductase and xanthine dehydrogenase 2 cofactor of nitrate reductase and
xanthine dehydrogenase 2		 0.68 0.31 -0.33
49 AT2G01120 origin recognition complex subunit 4 ORIGIN RECOGNITION COMPLEX SUBUNIT
4, origin recognition complex
subunit 4		 -0.68 0.31 -0.31
50 AT4G17340 tonoplast intrinsic protein 2;2 DELTA-TIP2, tonoplast intrinsic
protein 2;2		 -0.68 0.31 -0.33
51 AT1G50110 D-aminoacid aminotransferase-like PLP-dependent enzymes
superfamily protein		 -0.68 0.32 -0.32
52 AT1G53300 tetratricopetide-repeat thioredoxin-like 1 tetratricopetide-repeat
thioredoxin-like 1		 -0.68 0.33 -0.33
53 AT1G18160 Protein kinase superfamily protein 0.68 0.31 -0.3
54 AT1G15780 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast
hits to 43153 proteins in 1828 species: Archae - 30;
Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants -
7727; Viruses - 307; Other Eukaryotes - 38082 (source: NCBI
BLink).		 0.68 0.33 -0.29
55 AT5G04410 NAC domain containing protein 2 Arabidopsis NAC domain containing
protein 78, NAC domain containing
protein 2		 0.68 0.31 -0.33
56 AT3G01560 Protein of unknown function (DUF1421) 0.68 0.32 -0.3
57 AT1G73620 Pathogenesis-related thaumatin superfamily protein -0.67 0.33 -0.29
58 AT3G63130 RAN GTPase activating protein 1 RAN GTPASE-ACTIVATING PROTEIN 1,
RAN GTPase activating protein 1		 -0.66 0.31 -0.32
59 AT3G27330 zinc finger (C3HC4-type RING finger) family protein -0.65 0.33 -0.32
60 AT5G28630 glycine-rich protein -0.64 0.31 -0.31
61 AT5G43070 WPP domain protein 1 WPP domain protein 1 -0.64 0.31 -0.31
62 AT4G24710 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.64 0.32 -0.32
63 AT2G22260 oxidoreductase, 2OG-Fe(II) oxygenase family protein -0.64 0.37 -0.32
64 AT3G12110 actin-11 actin-11 -0.64 0.31 -0.28
65 AT1G78750 F-box/RNI-like superfamily protein -0.64 0.32 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
66 C0257 Tryptophan L-Tryptophan L-Tryptophan glucosinolate biosynthesis from tryptophan,
IAA biosynthesis I,
tryptophan biosynthesis,
camalexin biosynthesis,
tRNA charging 		0.68 0.31 -0.33 C0257