AT4G38780 : -
Query Information
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AGICode AT4G38780
Description Pre-mRNA-processing-splicing factor
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G38780 Pre-mRNA-processing-splicing factor 1 0.31 -0.34
2 AT3G04340 FtsH extracellular protease family embryo defective 2458 0.77 0.3 -0.34
3 AT4G32040 KNOTTED1-like homeobox gene 5 KNOTTED1-like homeobox gene 5 -0.77 0.3 -0.31
4 AT3G06760 Drought-responsive family protein -0.76 0.32 -0.32
5 AT1G71810 Protein kinase superfamily protein 0.76 0.33 -0.28
6 AT1G30610 pentatricopeptide (PPR) repeat-containing protein EMBRYO DEFECTIVE 2279, EMBRYO
DEFECTIVE 88		 0.75 0.29 -0.3
7 AT4G35110 Arabidopsis phospholipase-like protein (PEARLI 4) family -0.74 0.31 -0.29
8 AT2G29890 villin-like 1 ATVLN1, villin 1 0.73 0.33 -0.36
9 AT1G25280 tubby like protein 10 tubby like protein 10, tubby like
protein 10		 -0.73 0.3 -0.32
10 AT3G61980 serine protease inhibitor, Kazal-type family protein -0.73 0.32 -0.34
11 AT2G39560 Putative membrane lipoprotein 0.72 0.3 -0.31
12 AT2G31530 SecY protein transport family protein EMBRYO DEFECTIVE 2289, SECY
HOMOLOG 2		 0.72 0.34 -0.32
13 AT3G13430 RING/U-box superfamily protein -0.72 0.32 -0.31
14 AT3G54300 vesicle-associated membrane protein 727 vesicle-associated membrane
protein 727, VAMP727,
vesicle-associated membrane
protein 727		 -0.72 0.3 -0.31
15 AT5G63920 topoisomerase 3alpha AtTOP3alpha, topoisomerase 3alpha 0.72 0.33 -0.31
16 AT3G50900 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G66490.1); Has 45 Blast hits
to 45 proteins in 7 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.71 0.32 -0.3
17 AT1G14370 protein kinase 2A protein kinase 2A, kinase 1,
PBS1-like 2		 -0.71 0.3 -0.34
18 AT1G28280 VQ motif-containing protein -0.71 0.32 -0.33
19 AT1G53840 pectin methylesterase 1 pectin methylesterase 1, pectin
methylesterase 1		 -0.71 0.32 -0.32
20 AT2G36330 Uncharacterised protein family (UPF0497) -0.71 0.29 -0.34
21 AT3G56160 Sodium Bile acid symporter family 0.71 0.31 -0.33
22 AT5G59140 BTB/POZ domain-containing protein -0.7 0.31 -0.3
23 AT5G16050 general regulatory factor 5 GF14 UPSILON, general regulatory
factor 5		 -0.7 0.31 -0.32
24 AT2G35600 BREVIS RADIX-like 1 ARABIDOPSIS THALIANA BREVIS RADIX
LIKE 1, BREVIS RADIX-like 1		 0.7 0.32 -0.33
25 AT3G55600 Membrane fusion protein Use1 -0.7 0.3 -0.31
26 ATCG00630 PSAJ PSAJ 0.69 0.3 -0.31
27 AT5G07470 peptidemethionine sulfoxide reductase 3 ARABIDOPSIS THALIANA METHIONINE
SULFOXIDE REDUCTASE 3,
peptidemethionine sulfoxide
reductase 3		 -0.69 0.31 -0.34
28 AT3G20770 Ethylene insensitive 3 family protein AtEIN3, ETHYLENE-INSENSITIVE3 -0.69 0.33 -0.34
29 AT3G54850 plant U-box 14 ATPUB14, plant U-box 14 -0.69 0.32 -0.32
30 AT1G01730 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; Has 42 Blast hits to 42 proteins
in 17 species: Archae - 0; Bacteria - 2; Metazoa - 5; Fungi
- 1; Plants - 34; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.69 0.3 -0.32
31 AT4G39090 Papain family cysteine protease RESPONSIVE TO DEHYDRATION 19,
RESPONSIVE TO DEHYDRATION 19A		 -0.69 0.31 -0.33
32 AT1G22280 phytochrome-associated protein phosphatase type 2C phytochrome-associated protein
phosphatase type 2C		 -0.69 0.32 -0.32
33 AT3G09085 Protein of unknown function (DUF962) -0.69 0.31 -0.32
34 AT2G29960 cyclophilin 5 ARABIDOPSIS THALIANA CYCLOPHILIN
5, CYCLOPHILIN 19-4, cyclophilin 5		 -0.69 0.31 -0.34
35 AT5G20360 Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein
/ tetratricopeptide repeat (TPR)-containing protein		 Phox3 0.69 0.3 -0.31
36 AT3G52090 DNA-directed RNA polymerase, RBP11-like ATRPB13.6, NRPB11, NRPD11, NRPE11 -0.69 0.31 -0.35
37 AT1G67690 Zincin-like metalloproteases family protein 0.69 0.32 -0.31
38 AT5G07630 lipid transporters 0.68 0.33 -0.33
39 AT2G47520 Integrase-type DNA-binding superfamily protein Arabidopsis thaliana ethylene
response factor 71, ethylene
response factor 71, HYPOXIA
RESPONSIVE ERF (ETHYLENE RESPONSE
FACTOR) 2		 -0.68 0.31 -0.31
40 AT3G48680 gamma carbonic anhydrase-like 2 AtCAL2, gamma carbonic
anhydrase-like 2		 -0.68 0.33 -0.31
41 AT3G49600 ubiquitin-specific protease 26 ATUBP26, SUP32, ubiquitin-specific
protease 26		 0.68 0.3 -0.33
42 AT5G44800 chromatin remodeling 4 chromatin remodeling 4, PICKLE
RELATED 1		 0.68 0.31 -0.32
43 AT1G76630 Tetratricopeptide repeat (TPR)-like superfamily protein 0.68 0.31 -0.31
44 AT2G34470 urease accessory protein G PSKF109, urease accessory protein
G		 -0.68 0.31 -0.31
45 AT1G45976 S-ribonuclease binding protein 1 S-ribonuclease binding protein 1 -0.68 0.32 -0.3
46 AT1G53090 SPA1-related 4 SPA1-related 4 0.68 0.31 -0.3
47 AT3G54840 Ras-related small GTP-binding family protein ARA-6, ARA6, ATRAB5C, ATRABF1,
RABF1		 -0.68 0.32 -0.32
48 AT1G17080 Ribosomal protein L18ae family -0.68 0.32 -0.31
49 AT1G03320 unknown protein; Has 1038 Blast hits to 683 proteins in 112
species: Archae - 4; Bacteria - 14; Metazoa - 318; Fungi -
117; Plants - 86; Viruses - 8; Other Eukaryotes - 491
(source: NCBI BLink).		 0.67 0.31 -0.32
50 AT5G27910 nuclear factor Y, subunit C8 nuclear factor Y, subunit C8 0.67 0.31 -0.31
51 AT3G17710 F-box and associated interaction domains-containing protein -0.67 0.33 -0.29
52 AT4G21450 PapD-like superfamily protein -0.67 0.31 -0.33
53 AT5G62670 H(+)-ATPase 11 H(+)-ATPase 11, H(+)-ATPase 11 0.67 0.31 -0.32
54 AT1G79590 syntaxin of plants 52 ATSYP52, syntaxin of plants 52 -0.67 0.32 -0.32
55 AT1G55540 Nuclear pore complex protein 0.67 0.3 -0.32
56 AT5G54390 HAL2-like HAL2-like, ATAHL, HAL2-like -0.66 0.32 -0.32
57 AT1G10700 phosphoribosyl pyrophosphate (PRPP) synthase 3 phosphoribosyl pyrophosphate
(PRPP) synthase 3		 -0.66 0.3 -0.29
58 AT3G44740 Class II aaRS and biotin synthetases superfamily protein 0.66 0.33 -0.3
59 AT1G76870 BEST Arabidopsis thaliana protein match is:
sequence-specific DNA binding transcription factors
(TAIR:AT1G21200.1); Has 406 Blast hits to 351 proteins in
76 species: Archae - 0; Bacteria - 2; Metazoa - 137; Fungi
- 14; Plants - 127; Viruses - 0; Other Eukaryotes - 126
(source: NCBI BLink).		 0.66 0.29 -0.31
60 AT2G34880 Transcription factor jumonji (jmj) family protein / zinc
finger (C5HC2 type) family protein		 maternal effect embryo arrest 27,
PKDM7C		 0.66 0.32 -0.32
61 AT3G46440 UDP-XYL synthase 5 UDP-XYL synthase 5 -0.66 0.31 -0.31
62 AT5G50820 NAC domain containing protein 97 NAC domain containing protein 97,
NAC domain containing protein 97		 0.66 0.31 -0.32
63 AT5G22030 ubiquitin-specific protease 8 ubiquitin-specific protease 8 0.66 0.32 -0.31
64 AT4G22780 ACT domain repeat 7 ACT domain repeat 7 -0.66 0.29 -0.31
65 AT5G26990 Drought-responsive family protein -0.65 0.31 -0.31
66 AT4G02080 secretion-associated RAS super family 2 ASAR1, secretion-associated RAS
super family 2, ATSARA1C,
secretion-associated RAS super
family 2		 -0.65 0.32 -0.3
67 AT3G17880 tetraticopeptide domain-containing thioredoxin ARABIDOPSIS THALIANA
HSP70-INTERACTING PROTEIN 2,
tetraticopeptide domain-containing
thioredoxin, HSC-70 INTERACTING
PROTEIN, tetraticopeptide
domain-containing thioredoxin		 -0.65 0.32 -0.3
68 AT2G20420 ATP citrate lyase (ACL) family protein -0.65 0.32 -0.32
69 AT2G43060 ILI1 binding bHLH 1 ILI1 binding bHLH 1 -0.65 0.32 -0.32
70 AT5G18110 novel cap-binding protein novel cap-binding protein -0.65 0.33 -0.31
71 AT2G03730 ACT domain repeat 5 ACT domain repeat 5 -0.65 0.33 -0.3
72 AT2G27260 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 -0.65 0.31 -0.32
73 AT2G46900 CONTAINS InterPro DOMAIN/s: Basic helix-loop-helix,
Nulp1-type (InterPro:IPR006994); Has 2929 Blast hits to
2464 proteins in 333 species: Archae - 2; Bacteria - 151;
Metazoa - 913; Fungi - 372; Plants - 141; Viruses - 47;
Other Eukaryotes - 1303 (source: NCBI BLink).		 -0.64 0.31 -0.31
74 AT3G13050 Major facilitator superfamily protein AtNiaP, nicotinate transporter -0.64 0.35 -0.29
75 AT1G26830 cullin 3 cullin 3, cullin 3A, cullin 3,
cullin 3A		 -0.64 0.31 -0.32
76 AT1G13280 allene oxide cyclase 4 allene oxide cyclase 4 -0.64 0.31 -0.32
77 AT3G13620 Amino acid permease family protein -0.64 0.32 -0.32
78 AT1G72540 Protein kinase superfamily protein -0.64 0.34 -0.3
79 AT2G24360 Protein kinase superfamily protein -0.64 0.32 -0.33
80 AT1G56090 Tetratricopeptide repeat (TPR)-like superfamily protein -0.64 0.31 -0.31
81 AT2G19350 Eukaryotic protein of unknown function (DUF872) -0.63 0.31 -0.31
82 AT1G26770 expansin A10 ARABIDOPSIS THALIANA EXPANSIN 10,
ARABIDOPSIS THALIANA EXPANSIN 10,
expansin A10, ARABIDOPSIS THALIANA
EXPANSIN ALPHA 1.1, EXPANSIN 10,
expansin A10		 -0.63 0.31 -0.32