AT4G38890 : -
Query Information
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AGICode AT4G38890
Description FMN-linked oxidoreductases superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G38890 FMN-linked oxidoreductases superfamily protein 1 0.32 -0.31
2 AT5G19350 RNA-binding (RRM/RBD/RNP motifs) family protein 0.82 0.33 -0.31
3 AT5G22840 Protein kinase superfamily protein 0.8 0.32 -0.31
4 AT3G63400 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family
protein		 0.79 0.34 -0.32
5 AT2G03820 nonsense-mediated mRNA decay NMD3 family protein 0.79 0.28 -0.33
6 AT4G28480 DNAJ heat shock family protein 0.78 0.29 -0.31
7 AT1G55150 DEA(D/H)-box RNA helicase family protein 0.78 0.31 -0.31
8 AT5G53770 Nucleotidyltransferase family protein 0.77 0.32 -0.32
9 AT5G57280 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 root initiation defective 2 0.77 0.3 -0.31
10 AT4G26430 COP9 signalosome subunit 6B COP9 signalosome subunit 6B 0.77 0.31 -0.3
11 AT1G43860 sequence-specific DNA binding transcription factors 0.76 0.31 -0.31
12 AT1G22730 MA3 domain-containing protein 0.76 0.34 -0.33
13 AT4G22200 potassium transport 2/3 AKT2, potassium transport 2/3,
AKT3, potassium transport 2/3		 -0.75 0.32 -0.32
14 AT3G49990 unknown protein; Has 1524 Blast hits to 1298 proteins in
225 species: Archae - 9; Bacteria - 84; Metazoa - 474;
Fungi - 184; Plants - 98; Viruses - 17; Other Eukaryotes -
658 (source: NCBI BLink).		 0.75 0.31 -0.29
15 AT4G32400 Mitochondrial substrate carrier family protein ARABIDOPSIS THALIANA BRITTLE 1,
EMBRYO DEFECTIVE 104, EMBRYO
DEFECTIVE 42, SODIUM
HYPERSENSITIVE 1		 0.75 0.33 -0.31
16 AT1G31020 thioredoxin O2 thioredoxin O2, thioredoxin O2 0.75 0.32 -0.3
17 AT4G00090 Transducin/WD40 repeat-like superfamily protein 0.75 0.31 -0.31
18 AT5G22330 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 ATTIP49A, RESISTANCE TO
PSEUDOMONAS SYRINGAE PV MACULICOLA
INTERACTOR 1		 0.74 0.3 -0.3
19 AT4G23040 Ubiquitin-like superfamily protein 0.74 0.33 -0.29
20 AT4G34910 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.74 0.3 -0.31
21 AT2G24500 Zinc finger protein 622 FZF 0.74 0.31 -0.29
22 AT1G33230 TMPIT-like protein 0.73 0.3 -0.35
23 AT2G38290 ammonium transporter 2 ammonium transporter 2, AMMONIUM
TRANSPORTER 2;1, ammonium
transporter 2		 0.73 0.3 -0.34
24 AT2G21520 Sec14p-like phosphatidylinositol transfer family protein 0.73 0.32 -0.32
25 AT3G53520 UDP-glucuronic acid decarboxylase 1 ATUXS1, UDP-glucuronic acid
decarboxylase 1		 0.73 0.32 -0.33
26 AT2G47970 Nuclear pore localisation protein NPL4 0.73 0.27 -0.33
27 AT1G19370 unknown protein; LOCATED IN: endoplasmic reticulum;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT1G75140.1); Has 45 Blast hits to 43
proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes -
1 (source: NCBI BLink).		 0.73 0.33 -0.31
28 AT3G19980 flower-specific, phytochrome-associated protein phosphatase
3		 flower-specific,
phytochrome-associated protein
phosphatase 3, EMBRYO DEFECTIVE
2736, flower-specific,
phytochrome-associated protein
phosphatase 3, SERINE/THREONINE
PROTEIN PHOSPHATASE		 0.73 0.3 -0.32
29 AT1G04510 MOS4-associated complex 3A MOS4-associated complex 3A 0.73 0.3 -0.32
30 AT4G37190 LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 20
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Beta tubulin, autoregulation
binding site (InterPro:IPR013838), Misato Segment II,
myosin-like (InterPro:IPR019605), Tubulin/FtsZ, N-terminal
(InterPro:IPR019746); Has 345 Blast hits to 341 proteins in
161 species: Archae - 0; Bacteria - 0; Metazoa - 131; Fungi
- 140; Plants - 55; Viruses - 0; Other Eukaryotes - 19
(source: NCBI BLink).		 0.72 0.31 -0.3
31 AT3G19630 Radical SAM superfamily protein 0.72 0.32 -0.31
32 AT2G31360 16:0delta9 desaturase 2 16:0delta9 desaturase 2,
16:0delta9 desaturase 2		 0.72 0.3 -0.3
33 AT5G50315 transposable element gene 0.72 0.32 -0.32
34 AT3G01150 polypyrimidine tract-binding protein 1 POLYPYRIMIDINE TRACT-BINDING
PROTEIN 1, polypyrimidine
tract-binding protein 1		 0.72 0.34 -0.32
35 AT1G73920 alpha/beta-Hydrolases superfamily protein -0.72 0.33 -0.3
36 AT2G40780 Nucleic acid-binding, OB-fold-like protein 0.72 0.31 -0.3
37 AT2G47420 Ribosomal RNA adenine dimethylase family protein adenosine dimethyl transferase 1A 0.72 0.32 -0.31
38 AT3G05420 acyl-CoA binding protein 4 acyl-CoA binding protein 4 0.72 0.33 -0.33
39 AT1G73180 Eukaryotic translation initiation factor eIF2A family
protein		 0.71 0.33 -0.32
40 AT2G23070 Protein kinase superfamily protein 0.71 0.3 -0.31
41 AT4G33960 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 20 plant structures;
EXPRESSED DURING: 10 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G15830.1); Has 32 Blast hits to 32 proteins in 4
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.71 0.32 -0.3
42 AT4G02570 cullin 1 cullin 1, AUXIN RESISTANT 6,
cullin 1		 0.71 0.31 -0.3
43 AT4G01320 Peptidase family M48 family protein ATSTE24, STE24 0.71 0.31 -0.31
44 AT1G63240 unknown protein; Has 460 Blast hits to 413 proteins in 106
species: Archae - 5; Bacteria - 12; Metazoa - 152; Fungi -
46; Plants - 43; Viruses - 2; Other Eukaryotes - 200
(source: NCBI BLink).		 -0.71 0.31 -0.32
45 AT1G64350 Transducin/WD40 repeat-like superfamily protein SEH1H 0.71 0.33 -0.3
46 AT1G02330 CONTAINS InterPro DOMAIN/s: Hepatocellular
carcinoma-associated antigen 59 (InterPro:IPR010756); Has
1239 Blast hits to 998 proteins in 204 species: Archae - 4;
Bacteria - 71; Metazoa - 421; Fungi - 109; Plants - 87;
Viruses - 5; Other Eukaryotes - 542 (source: NCBI BLink).		 0.71 0.33 -0.33
47 AT5G20570 RING-box 1 RING-BOX 1, HRT1, RING-box 1,
REGULATOR OF CULLINS-1		 0.71 0.33 -0.29
48 AT5G55610 unknown protein; LOCATED IN: mitochondrion, chloroplast,
plastid, membrane; EXPRESSED IN: 25 plant structures;
EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.71 0.31 -0.32
49 AT2G34970 Trimeric LpxA-like enzyme 0.71 0.3 -0.32
50 AT3G57360 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G02370.2); Has 122 Blast hits
to 122 proteins in 54 species: Archae - 0; Bacteria - 0;
Metazoa - 74; Fungi - 4; Plants - 41; Viruses - 0; Other
Eukaryotes - 3 (source: NCBI BLink).		 0.7 0.31 -0.3
51 AT1G53035 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G15358.1); Has 49 Blast hits to 49 proteins in 9
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.7 0.33 -0.3
52 AT2G25590 Plant Tudor-like protein -0.7 0.33 -0.31
53 AT1G60620 RNA polymerase I subunit 43 RNA polymerase I subunit 43, RNA
polymerase I subunit 43		 0.7 0.32 -0.31
54 AT3G16760 Tetratricopeptide repeat (TPR)-like superfamily protein 0.7 0.3 -0.29
55 AT3G02320 N2,N2-dimethylguanosine tRNA methyltransferase 0.7 0.32 -0.32
56 AT3G09350 Fes1A Fes1A 0.7 0.31 -0.31
57 AT2G02880 mucin-related 0.7 0.3 -0.32
58 AT3G59990 methionine aminopeptidase 2B methionine aminopeptidase 2B 0.7 0.3 -0.31
59 AT3G16910 acyl-activating enzyme 7 acyl-activating enzyme 7, ACETATE
NON-UTILIZING 1		 -0.69 0.29 -0.3
60 AT2G44020 Mitochondrial transcription termination factor family
protein		 0.69 0.3 -0.33
61 AT3G51270 protein serine/threonine kinases;ATP binding;catalytics 0.69 0.32 -0.3
62 AT4G24440 transcription initiation factor IIA gamma chain /
TFIIA-gamma (TFIIA-S)		 0.69 0.31 -0.34
63 AT4G25500 arginine/serine-rich splicing factor 35 arginine/serine-rich splicing
factor 40, AT-SRP40, ARABIDOPSIS
THALIANA ARGININE/SERINE-RICH
SPLICING FACTOR 35, ATRSP40,
arginine/serine-rich splicing
factor 40, arginine/serine-rich
splicing factor 35		 0.69 0.3 -0.31
64 AT3G05850 transposable element gene 0.69 0.31 -0.3
65 AT1G50370 Calcineurin-like metallo-phosphoesterase superfamily
protein		 AtFYPP1, flower- specific,
phytochrome-associated protein
phosphatase 1		 0.69 0.32 -0.32
66 AT3G53500 RNA-binding (RRM/RBD/RNP motifs) family protein with
retrovirus zinc finger-like domain		 arginine/serine-rich zinc
knuckle-containing protein 32,
arginine/serine-rich zinc
knuckle-containing protein 32,
arginine/serine-rich zinc
knuckle-containing protein 32		 0.69 0.33 -0.31
67 AT1G48430 Dihydroxyacetone kinase -0.68 0.3 -0.32
68 AT1G14790 RNA-dependent RNA polymerase 1 ATRDRP1, RNA-dependent RNA
polymerase 1		 -0.68 0.31 -0.32
69 AT3G10940 dual specificity protein phosphatase (DsPTP1) family
protein		 LIKE SEX4 2 -0.67 0.32 -0.3
70 AT3G16700 Fumarylacetoacetate (FAA) hydrolase family -0.67 0.33 -0.28
71 AT5G14450 GDSL-like Lipase/Acylhydrolase superfamily protein -0.66 0.33 -0.31
72 AT5G24150 FAD/NAD(P)-binding oxidoreductase family protein SQUALENE MONOOXYGENASE 5, SQP1 -0.66 0.29 -0.31
73 AT4G08160 glycosyl hydrolase family 10 protein / carbohydrate-binding
domain-containing protein		 -0.65 0.31 -0.32
74 AT1G63740 Disease resistance protein (TIR-NBS-LRR class) family -0.65 0.3 -0.33
75 AT5G22460 alpha/beta-Hydrolases superfamily protein -0.65 0.32 -0.35
76 AT2G15440 Protein of unknown function (DUF579) -0.65 0.34 -0.31
77 AT2G26170 cytochrome P450, family 711, subfamily A, polypeptide 1 cytochrome P450, family 711,
subfamily A, polypeptide 1, MORE
AXILLARY BRANCHES 1		 -0.64 0.32 -0.32
78 AT5G47720 Thiolase family protein -0.64 0.34 -0.32
79 AT5G51290 Diacylglycerol kinase family protein -0.63 0.32 -0.31
80 AT1G64620 Dof-type zinc finger DNA-binding family protein -0.62 0.32 -0.33
81 AT5G23800 DOMAIN OF UNKNOWN FUNCTION 724 10 DOMAIN OF UNKNOWN FUNCTION 724 10,
DOMAIN OF UNKNOWN FUNCTION 724 10		 -0.62 0.33 -0.31
82 AT5G27710 unknown protein; Has 49 Blast hits to 49 proteins in 17
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 48; Viruses - 0; Other Eukaryotes - 1 (source:
NCBI BLink).		 -0.61 0.32 -0.3
83 AT4G31330 Protein of unknown function, DUF599 -0.61 0.3 -0.33
84 AT5G06280 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G52520.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.61 0.32 -0.29
85 AT2G02780 Leucine-rich repeat protein kinase family protein -0.6 0.32 -0.31
86 AT3G20420 RNAse THREE-like protein 2 RNASEIII-LIKE 2, RNAse THREE-like
protein 2		 -0.6 0.34 -0.32
87 AT4G33740 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G37820.1); Has 138210 Blast
hits to 73191 proteins in 2959 species: Archae - 732;
Bacteria - 18006; Metazoa - 48521; Fungi - 16820; Plants -
7078; Viruses - 1046; Other Eukaryotes - 46007 (source:
NCBI BLink).		 -0.6 0.32 -0.32
88 AT2G39435 Phosphatidylinositol N-acetyglucosaminlytransferase subunit
P-related		 -0.59 0.31 -0.31
89 AT2G01680 Ankyrin repeat family protein -0.59 0.29 -0.31
90 AT1G30160 Protein of unknown function (DUF295) -0.58 0.32 -0.31
91 AT3G24010 RING/FYVE/PHD zinc finger superfamily protein ARABIDOPSIS THALIANA INHIBITOR OF
GROWTH 1, INHIBITOR OF GROWTH 1		 -0.57 0.31 -0.31
92 AT2G34490 cytochrome P450, family 710, subfamily A, polypeptide 2 cytochrome P450, family 710,
subfamily A, polypeptide 2		 -0.57 0.32 -0.3
93 AT1G12730 GPI transamidase subunit PIG-U -0.57 0.33 -0.3
94 AT4G22840 Sodium Bile acid symporter family -0.56 0.32 -0.34