AT4G38560 : -
Query Information
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AGICode AT4G38560
Description Arabidopsis phospholipase-like protein (PEARLI 4) family
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G38560 Arabidopsis phospholipase-like protein (PEARLI 4) family 1 0.29 -0.32
2 AT5G52750 Heavy metal transport/detoxification superfamily protein 0.78 0.29 -0.3
3 AT1G10340 Ankyrin repeat family protein 0.78 0.32 -0.31
4 AT2G14560 Protein of unknown function (DUF567) LATE UPREGULATED IN RESPONSE TO
HYALOPERONOSPORA PARASITICA		 0.78 0.32 -0.32
5 AT3G48650 pseudogene, At14a-related protein, similar to At14a
(GI:11994571 and GI:11994573) (Arabidopsis thaliana)		 0.76 0.31 -0.31
6 AT4G14365 XB3 ortholog 4 in Arabidopsis thaliana XB3 ortholog 4 in Arabidopsis
thaliana		 0.76 0.3 -0.32
7 AT2G32680 receptor like protein 23 receptor like protein 23, receptor
like protein 23		 0.76 0.34 -0.32
8 AT3G47480 Calcium-binding EF-hand family protein 0.76 0.33 -0.31
9 AT5G10380 RING/U-box superfamily protein ATRING1, RING1 0.74 0.32 -0.32
10 AT5G39020 Malectin/receptor-like protein kinase family protein 0.74 0.33 -0.32
11 AT1G35230 arabinogalactan protein 5 arabinogalactan protein 5 0.72 0.33 -0.32
12 AT5G60900 receptor-like protein kinase 1 receptor-like protein kinase 1 0.72 0.31 -0.32
13 AT2G20142 Toll-Interleukin-Resistance (TIR) domain family protein 0.71 0.32 -0.33
14 AT3G24490 Alcohol dehydrogenase transcription factor Myb/SANT-like
family protein		 -0.7 0.33 -0.3
15 AT1G73805 Calmodulin binding protein-like SAR Deficient 1 0.7 0.31 -0.31
16 AT4G23780 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G23770.1); Has 51 Blast hits
to 49 proteins in 22 species: Archae - 0; Bacteria - 9;
Metazoa - 12; Fungi - 0; Plants - 14; Viruses - 2; Other
Eukaryotes - 14 (source: NCBI BLink).		 0.7 0.33 -0.32
17 AT1G69840 SPFH/Band 7/PHB domain-containing membrane-associated
protein family		 0.7 0.32 -0.32
18 AT1G13470 Protein of unknown function (DUF1262) 0.69 0.27 -0.32
19 AT1G35710 Protein kinase family protein with leucine-rich repeat
domain		 0.69 0.31 -0.31
20 AT1G73805 Calmodulin binding protein-like SAR Deficient 1 0.68 0.29 -0.32
21 AT1G08450 calreticulin 3 A. thaliana calreticulin 3,
calreticulin 3, EMS-MUTAGENIZED
BRI1 SUPPRESSOR 2, PRIORITY IN
SWEET LIFE 1		 0.68 0.3 -0.31
22 AT5G52760 Copper transport protein family 0.68 0.32 -0.3
23 AT4G23610 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 0.68 0.31 -0.31
24 AT1G15790 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G15780.1); Has 170 Blast hits
to 94 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 170; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.67 0.3 -0.3
25 AT1G23840 unknown protein; LOCATED IN: endomembrane system; EXPRESSED
IN: 18 plant structures; EXPRESSED DURING: 12 growth
stages; BEST Arabidopsis thaliana protein match is: unknown
protein (TAIR:AT1G23850.1); Has 53 Blast hits to 48
proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.66 0.31 -0.28
26 AT1G15890 Disease resistance protein (CC-NBS-LRR class) family 0.66 0.3 -0.3
27 AT3G60420 Phosphoglycerate mutase family protein 0.66 0.32 -0.31
28 AT1G01560 MAP kinase 11 MAP kinase 11, MAP kinase 11 0.66 0.29 -0.32
29 AT5G39670 Calcium-binding EF-hand family protein 0.65 0.3 -0.3
30 AT2G24600 Ankyrin repeat family protein 0.65 0.31 -0.3
31 AT5G54610 ankyrin ankyrin 0.65 0.33 -0.32
32 AT2G14610 pathogenesis-related gene 1 PATHOGENESIS-RELATED GENE 1,
PATHOGENESIS-RELATED GENE 1,
pathogenesis-related gene 1		 0.65 0.31 -0.27
33 AT2G18660 plant natriuretic peptide A AtPNP-A, plant natriuretic peptide
A		 0.64 0.31 -0.29
34 AT4G12640 RNA recognition motif (RRM)-containing protein -0.64 0.32 -0.31
35 AT5G24530 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 DOWNY MILDEW RESISTANT 6 0.63 0.32 -0.3
36 AT1G51700 DOF zinc finger protein 1 DOF zinc finger protein 1, DOF
zinc finger protein 1		 0.63 0.29 -0.33
37 AT3G26030 serine/threonine protein phosphatase 2A 55 kDa regulatory
subunit B prime delta		 serine/threonine protein
phosphatase 2A 55 kDa regulatory
subunit B prime delta		 -0.62 0.32 -0.34
38 AT4G38550 Arabidopsis phospholipase-like protein (PEARLI 4) family 0.62 0.32 -0.33
39 AT3G51920 calmodulin 9 ATCML9, calmodulin 9, CALMODULIN
LIKE PROTEIN 9		 0.62 0.28 -0.34
40 AT2G24160 pseudogene, leucine rich repeat protein family, contains
leucine rich-repeat domains Pfam:PF00560,
INTERPRO:IPR001611; contains some similarity to Cf-4
(Lycopersicon hirsutum) gi|2808683|emb|CAA05268; blastp
match of 37% identity and 8.4e-98 P-value to
GP|2808683|emb|CAA05268.1||AJ002235 Cf-4 {Lycopersicon
hirsutum}		 0.62 0.31 -0.3
41 AT4G11000 Ankyrin repeat family protein 0.62 0.31 -0.3
42 AT4G23220 cysteine-rich RLK (RECEPTOR-like protein kinase) 14 cysteine-rich RLK (RECEPTOR-like
protein kinase) 14		 0.62 0.3 -0.3
43 AT1G72060 serine-type endopeptidase inhibitors 0.61 0.31 -0.32
44 AT5G03350 Legume lectin family protein 0.61 0.31 -0.33
45 AT4G31330 Protein of unknown function, DUF599 0.61 0.32 -0.31
46 AT1G64290 F-box protein-related 0.61 0.31 -0.32
47 AT4G11140 cytokinin response factor 1 cytokinin response factor 1 -0.61 0.32 -0.32
48 AT3G26210 cytochrome P450, family 71, subfamily B, polypeptide 23 cytochrome P450, family 71,
subfamily B, polypeptide 23		 0.61 0.31 -0.3
49 AT5G24550 beta glucosidase 32 beta glucosidase 32 0.61 0.31 -0.32
50 AT2G43220 Cysteine/Histidine-rich C1 domain family protein -0.61 0.32 -0.35
51 AT3G22231 pathogen and circadian controlled 1 PATHOGEN AND CIRCADIAN CONTROLLED
1		 0.61 0.32 -0.32
52 AT1G70520 cysteine-rich RLK (RECEPTOR-like protein kinase) 2 ALTERED SEED GERMINATION 6,
cysteine-rich RLK (RECEPTOR-like
protein kinase) 2		 0.6 0.32 -0.31
53 AT1G15920 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 -0.6 0.31 -0.32
54 AT5G53370 pectin methylesterase PCR fragment F PECTIN METHYLESTERASE PCR FRAGMENT
F, pectin methylesterase PCR
fragment F		 0.6 0.32 -0.32
55 AT1G65500 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 14 plant structures;
EXPRESSED DURING: 9 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G65486.1); Has 23 Blast hits to 23 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.6 0.32 -0.31
56 AT1G02450 NIM1-interacting 1 NIMIN-1, NIM1-interacting 1 0.59 0.32 -0.31
57 AT1G30455 transcription regulators;translation initiation
factors;zinc ion binding;transcription activators		 0.59 0.32 -0.3
58 AT3G01290 SPFH/Band 7/PHB domain-containing membrane-associated
protein family		 AtHIR2, hypersensitive induced
reaction 2		 0.59 0.33 -0.31
59 AT4G26200 1-amino-cyclopropane-1-carboxylate synthase 7 1-amino-cyclopropane-1-carboxylate
synthase 7, ATACS7		 0.59 0.32 -0.31
60 AT5G58450 Tetratricopeptide repeat (TPR)-like superfamily protein -0.59 0.32 -0.34
61 AT1G76960 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 9 plant structures;
EXPRESSED DURING: 8 growth stages; Has 8 Blast hits to 8
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 8; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.58 0.32 -0.31
62 AT4G19520 disease resistance protein (TIR-NBS-LRR class) family 0.58 0.33 -0.31
63 AT4G23810 WRKY family transcription factor ATWRKY53, WRKY53 0.58 0.32 -0.31
64 AT4G09430 Disease resistance protein (TIR-NBS-LRR class) family -0.58 0.27 -0.31
65 AT2G14570 transposable element gene -0.58 0.31 -0.32
66 AT1G64170 cation/H+ exchanger 16 cation/H+ exchanger 16, cation/H+
exchanger 16		 0.58 0.32 -0.33
67 AT5G18880 RNA-directed DNA polymerase (reverse transcriptase)-related
family protein		 0.58 0.3 -0.32
68 AT1G19250 flavin-dependent monooxygenase 1 flavin-dependent monooxygenase 1 0.58 0.3 -0.31
69 AT3G52160 3-ketoacyl-CoA synthase 15 3-ketoacyl-CoA synthase 15 0.58 0.32 -0.32
70 AT4G23330 BEST Arabidopsis thaliana protein match is: eukaryotic
translation initiation factor 3A (TAIR:AT4G11420.1); Has 63
Blast hits to 55 proteins in 14 species: Archae - 0;
Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 62; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.58 0.31 -0.29
71 AT4G08850 Leucine-rich repeat receptor-like protein kinase family
protein		 0.57 0.3 -0.31
72 AT4G32910 CONTAINS InterPro DOMAIN/s: Nuclear pore complex protein,
Nucleoporin Nup85-like (InterPro:IPR011502); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.57 0.3 -0.32
73 AT5G64870 SPFH/Band 7/PHB domain-containing membrane-associated
protein family		 0.57 0.32 -0.33
74 AT4G23180 cysteine-rich RLK (RECEPTOR-like protein kinase) 10 cysteine-rich RLK (RECEPTOR-like
protein kinase) 10, RLK4		 0.57 0.33 -0.32
75 AT4G13510 ammonium transporter 1;1 ammonium transporter 1;1,
ARABIDOPSIS THALIANA AMMONIUM
TRANSPORT 1, ATAMT1;1		 0.57 0.29 -0.33
76 AT4G23310 cysteine-rich RLK (RECEPTOR-like protein kinase) 23 cysteine-rich RLK (RECEPTOR-like
protein kinase) 23		 0.56 0.33 -0.3
77 AT3G12920 SBP (S-ribonuclease binding protein) family protein BOI-related gene 3 -0.56 0.31 -0.33
78 AT4G02075 RING/FYVE/PHD zinc finger superfamily protein pitchoun 1 0.56 0.32 -0.31
79 AT3G50850 Putative methyltransferase family protein -0.55 0.31 -0.31
80 AT5G32470 Haem oxygenase-like, multi-helical -0.55 0.32 -0.3
81 AT5G11250 Disease resistance protein (TIR-NBS-LRR class) 0.55 0.31 -0.3
82 AT3G07040 NB-ARC domain-containing disease resistance protein RESISTANCE TO P. SYRINGAE PV
MACULICOLA 1, RESISTANCE TO
PSEUDOMONAS SYRINGAE 3		 0.55 0.33 -0.32
83 AT1G32930 Galactosyltransferase family protein -0.54 0.31 -0.32
84 AT5G15250 FTSH protease 6 ATFTSH6, FTSH protease 6 0.54 0.3 -0.3
85 AT3G60100 citrate synthase 5 citrate synthase 5 0.54 0.33 -0.32
86 AT1G03370 C2 calcium/lipid-binding and GRAM domain containing protein 0.54 0.31 -0.3
87 AT3G12380 actin-related protein 5 actin-related protein 5,
ACTIN-RELATED PROTEIN 5		 -0.54 0.31 -0.32
88 AT4G09140 MUTL-homologue 1 ARABIDOPSIS THALIANA
MUTL-HOMOLOGUE 1, MUTL-homologue 1		 -0.54 0.29 -0.32
89 AT1G52790 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.54 0.31 -0.33
90 AT1G63150 Tetratricopeptide repeat (TPR)-like superfamily protein -0.54 0.32 -0.32
91 AT3G60030 squamosa promoter-binding protein-like 12 squamosa promoter-binding
protein-like 12		 -0.54 0.33 -0.32
92 AT1G35880 unknown protein; Has 251 Blast hits to 234 proteins in 66
species: Archae - 2; Bacteria - 48; Metazoa - 87; Fungi -
9; Plants - 70; Viruses - 0; Other Eukaryotes - 35 (source:
NCBI BLink).		 0.54 0.34 -0.33
93 AT1G08210 Eukaryotic aspartyl protease family protein -0.54 0.28 -0.31
94 AT2G39710 Eukaryotic aspartyl protease family protein 0.54 0.29 -0.32
95 AT3G02890 RING/FYVE/PHD zinc finger superfamily protein -0.54 0.31 -0.29
96 AT5G18840 Major facilitator superfamily protein 0.54 0.33 -0.31
97 AT5G51760 Protein phosphatase 2C family protein ABA-hypersensitive germination 1 -0.53 0.31 -0.31
98 AT5G50200 nitrate transmembrane transporters ATNRT3.1, NITRATE TRANSPORTER 3.1,
WOUND-RESPONSIVE 3		 0.53 0.32 -0.31
99 AT4G14660 RNA polymerase Rpb7-like, N-terminal domain NRPE7 -0.53 0.32 -0.31
100 AT2G48160 Tudor/PWWP/MBT domain-containing protein -0.53 0.31 -0.31
101 AT4G34430 DNA-binding family protein SWITCH/SUCROSE NONFERMENTING 3D,
CHB3		 -0.53 0.32 -0.29
102 AT2G27920 serine carboxypeptidase-like 51 serine carboxypeptidase-like 51 0.53 0.32 -0.32
103 AT2G27460 sec23/sec24 transport family protein -0.53 0.32 -0.33
104 AT3G07340 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.53 0.32 -0.31
105 AT2G26135 RING/U-box protein with C6HC-type zinc finger 0.53 0.31 -0.31
106 AT2G17950 Homeodomain-like superfamily protein PGA6, WUSCHEL, WUSCHEL 1 0.53 0.31 -0.32
107 AT4G26390 Pyruvate kinase family protein 0.53 0.31 -0.32
108 AT1G66720 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.53 0.31 -0.32
109 AT4G16890 disease resistance protein (TIR-NBS-LRR class), putative BALL, SUPPRESSOR OF NPR1-1,
CONSTITUTIVE 1		 0.53 0.3 -0.31
110 AT1G03850 Glutaredoxin family protein glutaredoxin 13, glutaredoxin 13 0.53 0.3 -0.32
111 AT4G09510 cytosolic invertase 2 alkaline/neutral invertase I,
cytosolic invertase 2		 -0.52 0.32 -0.33
112 AT4G04550 transposable element gene -0.52 0.35 -0.31
113 AT1G01990 unknown protein; Has 32 Blast hits to 32 proteins in 6
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.52 0.33 -0.32
114 AT5G60100 pseudo-response regulator 3 pseudo-response regulator 3,
pseudo-response regulator 3		 -0.52 0.32 -0.32
115 AT5G46620 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G17960.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.52 0.32 -0.33
116 AT2G41020 WW domain-containing protein -0.52 0.34 -0.32
117 AT1G50640 ethylene responsive element binding factor 3 ATERF3, ethylene responsive
element binding factor 3		 -0.51 0.29 -0.3
118 AT4G11790 Pleckstrin homology (PH) domain superfamily protein -0.5 0.33 -0.32
119 AT3G06940 transposable element gene -0.5 0.33 -0.33
120 AT1G66110 Family of unknown function (DUF577) -0.5 0.32 -0.31
121 AT4G30200 vernalization5/VIN3-like vernalization5/VIN3-like 1,
VIN3-Like 2		 -0.5 0.33 -0.32
122 AT3G57220 Glycosyl transferase family 4 protein -0.5 0.33 -0.31
123 AT3G24800 proteolysis 1 proteolysis 1 -0.5 0.3 -0.3
124 AT3G09470 Major facilitator superfamily protein -0.5 0.3 -0.3
125 AT5G64970 Mitochondrial substrate carrier family protein -0.5 0.32 -0.29
126 AT1G17120 cationic amino acid transporter 8 cationic amino acid transporter 8 -0.49 0.31 -0.31
127 AT1G50380 Prolyl oligopeptidase family protein -0.49 0.31 -0.3
128 AT2G43190 ribonuclease P family protein -0.49 0.31 -0.29
129 AT2G06630 transposable element gene -0.48 0.33 -0.32
130 AT5G63950 chromatin remodeling 24 chromatin remodeling 24 -0.48 0.32 -0.29
131 AT5G37110 transposable element gene -0.48 0.31 -0.3
132 AT1G71410 ARM repeat superfamily protein -0.48 0.31 -0.33
133 AT2G06990 RNA helicase, ATP-dependent, SK12/DOB1 protein hua enhancer 2 -0.48 0.29 -0.32
134 AT3G47010 Glycosyl hydrolase family protein -0.48 0.32 -0.32
135 AT1G58470 RNA-binding protein 1 RNA-binding protein 1, RNA-binding
protein 1		 -0.48 0.3 -0.33
136 AT4G21710 DNA-directed RNA polymerase family protein EMBRYO DEFECTIVE 1989, NRPB2, RPB2 -0.48 0.31 -0.31
137 AT5G17410 Spc97 / Spc98 family of spindle pole body (SBP) component -0.47 0.31 -0.31
138 AT5G48990 Galactose oxidase/kelch repeat superfamily protein -0.47 0.32 -0.31
139 AT2G25370 RING/U-box superfamily protein -0.47 0.31 -0.31
140 AT3G10390 Flavin containing amine oxidoreductase family protein FLOWERING LOCUS D -0.47 0.29 -0.31
141 AT4G21730 pseudogene of N-ethylmaleimide sensitive factor (NSF) -0.47 0.32 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
142 C0020 1-Aminocyclopropane-1-carboxylic acid - 1-Aminocyclopropane-1-carboxylate jasmonoyl-amino acid conjugates biosynthesis I,
ethylene biosynthesis I (plants),
methionine salvage pathway 		-0.54 0.43 -0.44 C0020