AT4G38130 : ARABIDOPSIS HISTONE DEACETYLASE 1
Query Information
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AGICode AT4G38130
Description histone deacetylase 1
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G38130 histone deacetylase 1 ARABIDOPSIS HISTONE DEACETYLASE 1,
ARABIDOPSIS HISTONE DEACETYLASE
19, histone deacetylase 1, HDA1,
HISTONE DEACETYLASE 19, RPD3A		 1 0.3 -0.31
2 AT2G32600 hydroxyproline-rich glycoprotein family protein 0.73 0.3 -0.31
3 AT5G58760 damaged DNA binding 2 damaged DNA binding 2 0.72 0.31 -0.31
4 AT5G46840 RNA-binding (RRM/RBD/RNP motifs) family protein 0.71 0.3 -0.34
5 AT2G34490 cytochrome P450, family 710, subfamily A, polypeptide 2 cytochrome P450, family 710,
subfamily A, polypeptide 2		 -0.69 0.32 -0.3
6 AT2G36930 zinc finger (C2H2 type) family protein 0.67 0.31 -0.3
7 AT1G16780 Inorganic H pyrophosphatase family protein AtVHP2;2, VHP2;2 -0.67 0.34 -0.31
8 AT3G50440 methyl esterase 10 ARABIDOPSIS THALIANA METHYL
ESTERASE 10, methyl esterase 10		 -0.66 0.3 -0.3
9 AT3G53990 Adenine nucleotide alpha hydrolases-like superfamily
protein		 0.66 0.31 -0.29
10 AT1G30160 Protein of unknown function (DUF295) -0.65 0.3 -0.3
11 AT1G15170 MATE efflux family protein 0.65 0.32 -0.3
12 AT1G02090 Proteasome component (PCI) domain protein ARABIDOPSIS THALIANA COP9
SIGNALOSOME SUBUNIT 7,
CONSTITUTIVE PHOTOMORPHOGENIC 15,
COP9 SIGNALOSOME SUBUNIT 7, FUSCA
5		 0.64 0.32 -0.31
13 AT5G40200 DegP protease 9 DegP protease 9 0.64 0.33 -0.31
14 AT4G26950 Protein of unknown function, DUF584 -0.64 0.3 -0.32
15 AT1G22540 Major facilitator superfamily protein -0.63 0.33 -0.3
16 AT2G06990 RNA helicase, ATP-dependent, SK12/DOB1 protein hua enhancer 2 0.63 0.33 -0.3
17 AT5G28640 SSXT family protein ANGUSTIFOLIA 3, ARABIDOPSIS
GRF1-INTERACTING FACTOR 1,
GRF1-INTERACTING FACTOR,
GRF1-INTERACTING FACTOR 1		 0.63 0.31 -0.3
18 AT1G09440 Protein kinase superfamily protein -0.63 0.3 -0.31
19 AT3G02500 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G16030.1); Has 49 Blast hits
to 49 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.62 0.31 -0.3
20 AT1G03905 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 ATP-binding cassette I19 0.62 0.31 -0.31
21 AT5G23800 DOMAIN OF UNKNOWN FUNCTION 724 10 DOMAIN OF UNKNOWN FUNCTION 724 10,
DOMAIN OF UNKNOWN FUNCTION 724 10		 -0.62 0.29 -0.29
22 AT4G28020 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0066
(InterPro:IPR001378); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.61 0.31 -0.3
23 AT1G12370 photolyase 1 photolyase 1, UV RESISTANCE 2 0.61 0.3 -0.31
24 AT5G49400 zinc knuckle (CCHC-type) family protein 0.61 0.31 -0.34
25 AT2G27100 C2H2 zinc-finger protein SERRATE (SE) SERRATE 0.61 0.33 -0.31
26 AT3G25900 Homocysteine S-methyltransferase family protein ATHMT-1, HMT-1 0.61 0.31 -0.34
27 AT4G22753 sterol 4-alpha methyl oxidase 1-3 ATSMO1-3, sterol 4-alpha methyl
oxidase 1-3		 -0.6 0.32 -0.32
28 AT5G17210 Protein of unknown function (DUF1218) 0.6 0.34 -0.32
29 AT4G18465 RNA helicase family protein 0.59 0.33 -0.32
30 AT2G06040 CONTAINS InterPro DOMAIN/s: Leucine-rich repeat,
cysteine-containing subtype (InterPro:IPR006553); BEST
Arabidopsis thaliana protein match is: RNI-like superfamily
protein (TAIR:AT5G21900.1); Has 5028 Blast hits to 2547
proteins in 240 species: Archae - 0; Bacteria - 125;
Metazoa - 2326; Fungi - 765; Plants - 1373; Viruses - 0;
Other Eukaryotes - 439 (source: NCBI BLink).		 0.59 0.33 -0.33
31 AT5G54250 cyclic nucleotide-gated cation channel 4 cyclic nucleotide-gated cation
channel 4, cyclic nucleotide-gated
cation channel 4, DEFENSE, NO
DEATH 2, HLM1		 -0.59 0.31 -0.31
32 AT5G63990 Inositol monophosphatase family protein 0.59 0.34 -0.32
33 AT5G27360 Major facilitator superfamily protein SFP2 -0.59 0.33 -0.31
34 AT3G59800 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G43795.2); Has 15361 Blast
hits to 8061 proteins in 537 species: Archae - 2; Bacteria
- 622; Metazoa - 7561; Fungi - 1246; Plants - 920; Viruses
- 49; Other Eukaryotes - 4961 (source: NCBI BLink).		 0.58 0.32 -0.31
35 AT1G05030 Major facilitator superfamily protein -0.57 0.32 -0.34
36 AT2G21660 cold, circadian rhythm, and rna binding 2 GLYCINE RICH PROTEIN 7, cold,
circadian rhythm, and rna binding
2, GLYCINE-RICH RNA-BINDING
PROTEIN 7, GLYCINE-RICH
RNA-BINDING PROTEIN 7		 0.57 0.31 -0.29
37 AT4G16745 Exostosin family protein -0.57 0.32 -0.29
38 AT5G53320 Leucine-rich repeat protein kinase family protein 0.57 0.31 -0.32
39 AT2G23830 PapD-like superfamily protein -0.57 0.33 -0.33
40 AT5G51290 Diacylglycerol kinase family protein -0.56 0.33 -0.32
41 AT4G31330 Protein of unknown function, DUF599 -0.56 0.34 -0.32
42 AT3G62380 CONTAINS InterPro DOMAIN/s: F-box associated interaction
domain (InterPro:IPR017451); BEST Arabidopsis thaliana
protein match is: F-box family protein (TAIR:AT1G71320.1);
Has 422 Blast hits to 419 proteins in 26 species: Archae -
0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 420;
Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).		 -0.56 0.3 -0.32
43 AT1G16900 Alg9-like mannosyltransferase family 0.56 0.29 -0.3
44 AT4G24660 homeobox protein 22 HOMEOBOX PROTEIN 22, homeobox
protein 22, MATERNAL EFFECT EMBRYO
ARREST 68, ZINC FINGER HOMEODOMAIN
2		 -0.55 0.36 -0.29
45 AT5G23610 BEST Arabidopsis thaliana protein match is: SWITCH1
(TAIR:AT5G51330.1); Has 170 Blast hits to 162 proteins in
36 species: Archae - 3; Bacteria - 6; Metazoa - 6; Fungi -
4; Plants - 117; Viruses - 0; Other Eukaryotes - 34
(source: NCBI BLink).		 0.55 0.33 -0.32
46 AT5G06280 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G52520.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.55 0.31 -0.3
47 AT2G26810 Putative methyltransferase family protein 0.55 0.33 -0.32
48 AT2G28580 Plant protein of unknown function (DUF247) -0.55 0.31 -0.32
49 AT5G14880 Potassium transporter family protein -0.54 0.31 -0.3
50 AT3G17380 TRAF-like family protein -0.53 0.32 -0.34
51 AT5G21120 ETHYLENE-INSENSITIVE3-like 2 ETHYLENE-INSENSITIVE3-like 2 -0.53 0.3 -0.3
52 AT4G24540 AGAMOUS-like 24 AGAMOUS-like 24 -0.53 0.3 -0.32
53 AT3G08810 Galactose oxidase/kelch repeat superfamily protein -0.51 0.32 -0.32
54 AT5G03000 Galactose oxidase/kelch repeat superfamily protein -0.51 0.32 -0.34
55 AT1G43650 nodulin MtN21 /EamA-like transporter family protein -0.5 0.3 -0.32
56 AT5G61520 Major facilitator superfamily protein -0.5 0.3 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
57 C0103 Glutaric acid - - - 0.75 0.48 -0.48