AT4G37930 : serine transhydroxymethyltransferase 1
Query Information
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AGICode AT4G37930
Description serine transhydroxymethyltransferase 1
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G37930 serine transhydroxymethyltransferase 1 serine
transhydroxymethyltransferase 1,
SERINE HYDROXYMETHYLTRANSFERASE 1,
SERINE
TRANSHYDROXYMETHYLTRANSFERASE		 1 0.33 -0.31
2 AT1G18060 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 74 Blast hits to 74
proteins in 29 species: Archae - 0; Bacteria - 19; Metazoa
- 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes
- 6 (source: NCBI BLink).		 0.92 0.35 -0.34
3 AT4G01150 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
thylakoid, chloroplast thylakoid membrane, chloroplast,
plastoglobule, chloroplast envelope; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G38100.1); Has 323 Blast hits to 323 proteins in
59 species: Archae - 0; Bacteria - 107; Metazoa - 0; Fungi
- 0; Plants - 206; Viruses - 0; Other Eukaryotes - 10
(source: NCBI BLink).		 0.89 0.31 -0.31
4 AT5G23120 photosystem II stability/assembly factor, chloroplast
(HCF136)		 HIGH CHLOROPHYLL FLUORESCENCE 136 0.89 0.32 -0.3
5 AT5G59250 Major facilitator superfamily protein 0.89 0.29 -0.29
6 AT5G35630 glutamine synthetase 2 GLUTAMINE SYNTHETASE LIKE 1,
GLUTAMINE SYNTHETASE 2, glutamine
synthetase 2		 0.88 0.32 -0.33
7 AT1G51110 Plastid-lipid associated protein PAP / fibrillin family
protein		 0.87 0.34 -0.3
8 AT2G47590 photolyase/blue-light receptor 2 photolyase/blue-light receptor 2 0.87 0.31 -0.32
9 AT1G32080 membrane protein, putative AtLrgB, LrgB 0.87 0.33 -0.29
10 AT1G79040 photosystem II subunit R photosystem II subunit R 0.86 0.31 -0.3
11 AT2G21960 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G56180.1); Has 224 Blast hits to 222 proteins in
59 species: Archae - 0; Bacteria - 65; Metazoa - 0; Fungi -
0; Plants - 134; Viruses - 0; Other Eukaryotes - 25
(source: NCBI BLink).		 0.86 0.32 -0.3
12 AT2G04039 unknown protein; FUNCTIONS IN: molecular_function unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF2996
(InterPro:IPR021374); Has 159 Blast hits to 159 proteins in
52 species: Archae - 0; Bacteria - 76; Metazoa - 0; Fungi -
0; Plants - 38; Viruses - 0; Other Eukaryotes - 45 (source:
NCBI BLink).		 0.86 0.32 -0.31
13 AT5G22620 phosphoglycerate/bisphosphoglycerate mutase family protein 0.86 0.31 -0.33
14 AT1G51110 Plastid-lipid associated protein PAP / fibrillin family
protein		 0.85 0.31 -0.32
15 AT5G09660 peroxisomal NAD-malate dehydrogenase 2 peroxisomal NAD-malate
dehydrogenase 2		 0.85 0.31 -0.3
16 AT5G13410 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 0.85 0.31 -0.31
17 AT3G63140 chloroplast stem-loop binding protein of 41 kDa chloroplast stem-loop binding
protein of 41 kDa		 0.85 0.33 -0.31
18 AT5G43750 NAD(P)H dehydrogenase 18 NAD(P)H dehydrogenase 18,
Photosynthetic NDH subcomplex B 5		 0.84 0.31 -0.32
19 AT5G54290 cytochrome c biogenesis protein family CcdA 0.84 0.34 -0.34
20 AT5G19220 ADP glucose pyrophosphorylase large subunit 1 ADP GLUCOSE PYROPHOSPHORYLASE 2,
ADP glucose pyrophosphorylase
large subunit 1		 0.84 0.31 -0.31
21 AT3G43540 Protein of unknown function (DUF1350) 0.84 0.32 -0.32
22 AT2G39470 PsbP-like protein 2 Photosynthetic NDH subcomplex L
1, PsbP-like protein 2		 0.84 0.3 -0.33
23 AT1G16080 unknown protein; LOCATED IN: apoplast, chloroplast stroma,
chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 14 growth stages; Has 81
Blast hits to 81 proteins in 28 species: Archae - 0;
Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 62; Viruses
- 0; Other Eukaryotes - 17 (source: NCBI BLink).		 0.83 0.31 -0.33
24 AT5G04140 glutamate synthase 1 FERREDOXIN-DEPENDENT GLUTAMATE
SYNTHASE, FERREDOXIN-DEPENDENT
GLUTAMATE SYNTHASE 1, glutamate
synthase 1, GLUS		 0.83 0.32 -0.33
25 AT2G35370 glycine decarboxylase complex H glycine decarboxylase complex H 0.83 0.33 -0.3
26 AT5G08650 Small GTP-binding protein 0.83 0.33 -0.32
27 AT1G23740 Oxidoreductase, zinc-binding dehydrogenase family protein alkenal/one oxidoreductase 0.83 0.33 -0.31
28 AT3G27925 DegP protease 1 DegP protease 1, DegP protease 1 0.82 0.3 -0.29
29 AT4G35250 NAD(P)-binding Rossmann-fold superfamily protein 0.82 0.32 -0.33
30 AT3G48420 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 0.82 0.32 -0.3
31 AT4G33500 Protein phosphatase 2C family protein 0.82 0.32 -0.31
32 AT3G26060 Thioredoxin superfamily protein ATPRX Q, peroxiredoxin Q 0.82 0.29 -0.32
33 AT3G61080 Protein kinase superfamily protein 0.82 0.29 -0.33
34 AT2G21370 xylulose kinase-1 xylulose kinase-1, XYLULOSE KINASE
1		 0.82 0.32 -0.31
35 AT1G50450 Saccharopine dehydrogenase 0.82 0.33 -0.31
36 AT5G27560 Domain of unknown function (DUF1995) 0.82 0.32 -0.31
37 AT3G10230 lycopene cyclase AtLCY, lycopene cyclase 0.81 0.32 -0.32
38 AT5G65685 UDP-Glycosyltransferase superfamily protein 0.81 0.3 -0.3
39 AT1G18730 NDH dependent flow 6 NDH dependent flow 6,
Photosynthetic NDH subcomplex B 4		 0.81 0.33 -0.32
40 AT5G61410 D-ribulose-5-phosphate-3-epimerase EMBRYO DEFECTIVE 2728,
D-ribulose-5-phosphate-3-epimerase		 0.81 0.31 -0.31
41 AT5G16710 dehydroascorbate reductase 1 dehydroascorbate reductase 1 0.8 0.3 -0.34
42 AT2G28800 63 kDa inner membrane family protein ALBINO 3 0.8 0.33 -0.31
43 AT4G33470 histone deacetylase 14 ATHDA14, histone deacetylase 14 0.8 0.3 -0.31
44 AT1G79790 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 Arabidopsis thaliana chloroplast
FMN hydrolase 1, flavin
mononucleotide hydrolase 1		 0.8 0.32 -0.33
45 AT1G80030 Molecular chaperone Hsp40/DnaJ family protein 0.8 0.33 -0.3
46 AT5G28750 Bacterial sec-independent translocation protein mttA/Hcf106 0.8 0.29 -0.34
47 AT1G22850 SNARE associated Golgi protein family 0.8 0.31 -0.31
48 AT1G56500 haloacid dehalogenase-like hydrolase family protein 0.79 0.31 -0.29
49 AT1G73060 Low PSII Accumulation 3 Low PSII Accumulation 3 0.79 0.31 -0.32
50 AT5G57960 GTP-binding protein, HflX 0.79 0.32 -0.3
51 AT4G31500 cytochrome P450, family 83, subfamily B, polypeptide 1 ALTERED TRYPTOPHAN REGULATION 4,
cytochrome P450, family 83,
subfamily B, polypeptide 1, RED
ELONGATED 1, RUNT 1, SUPERROOT 2		 -0.66 0.32 -0.31
52 AT3G46440 UDP-XYL synthase 5 UDP-XYL synthase 5 -0.66 0.34 -0.3
53 AT4G32680 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G52343.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.64 0.33 -0.3
54 AT1G17860 Kunitz family trypsin and protease inhibitor protein -0.62 0.3 -0.32
55 AT4G15230 pleiotropic drug resistance 2 ATP-binding cassette G30, ATPDR2,
pleiotropic drug resistance 2		 -0.59 0.33 -0.31
56 AT2G26510 Xanthine/uracil permease family protein pigment defective embryo 135 -0.59 0.32 -0.32
57 AT5G05960 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.59 0.32 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
58 C0253 Threonic acid-1,4-lactone D,L-Threonic acid-1,4-lactone - - 0.8 0.46 -0.41
59 C0059 Arginine amide - - - 0.79 0.44 -0.47