AT4G38150 : -
Query Information
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AGICode AT4G38150
Description Pentatricopeptide repeat (PPR) superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G38150 Pentatricopeptide repeat (PPR) superfamily protein 1 0.31 -0.31
2 AT3G48250 Pentatricopeptide repeat (PPR) superfamily protein Buthionine sulfoximine-insensitive
roots 6		 0.85 0.3 -0.31
3 AT1G13160 ARM repeat superfamily protein 0.83 0.31 -0.29
4 AT1G71850 Ubiquitin carboxyl-terminal hydrolase family protein 0.82 0.33 -0.33
5 AT5G50315 transposable element gene 0.81 0.3 -0.33
6 AT5G19350 RNA-binding (RRM/RBD/RNP motifs) family protein 0.8 0.28 -0.33
7 AT3G18640 Zinc finger C-x8-C-x5-C-x3-H type family protein 0.8 0.35 -0.3
8 AT5G12220 las1-like family protein 0.79 0.32 -0.33
9 AT3G26782 Tetratricopeptide repeat (TPR)-like superfamily protein 0.79 0.32 -0.33
10 AT2G44020 Mitochondrial transcription termination factor family
protein		 0.78 0.3 -0.34
11 AT5G59980 Polymerase/histidinol phosphatase-like 0.78 0.31 -0.28
12 AT1G55900 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 embryo defective 1860, TIM50 0.78 0.29 -0.34
13 AT2G25430 epsin N-terminal homology (ENTH) domain-containing protein
/ clathrin assembly protein-related		 0.78 0.3 -0.31
14 AT2G02880 mucin-related 0.78 0.32 -0.32
15 AT4G10760 mRNAadenosine methylase EMBRYO DEFECTIVE 1706,
mRNAadenosine methylase		 0.77 0.31 -0.31
16 AT3G04610 RNA-binding KH domain-containing protein flowering locus KH domain 0.77 0.33 -0.32
17 AT1G79490 Pentatricopeptide repeat (PPR) superfamily protein embryo defective 2217 0.77 0.3 -0.32
18 AT5G16930 AAA-type ATPase family protein 0.77 0.31 -0.32
19 AT3G19630 Radical SAM superfamily protein 0.76 0.32 -0.31
20 AT3G15000 cobalt ion binding 0.76 0.32 -0.32
21 AT4G21170 Tetratricopeptide repeat (TPR)-like superfamily protein 0.75 0.3 -0.31
22 AT5G52820 WD-40 repeat family protein / notchless protein, putative 0.75 0.33 -0.31
23 AT3G25545 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 38
Blast hits to 38 proteins in 14 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.75 0.33 -0.33
24 AT4G31120 SHK1 binding protein 1 ATPRMT5, PROTEIN ARGININE
METHYLTRANSFERASE 5, SHK1 binding
protein 1		 0.75 0.3 -0.3
25 AT2G21440 RNA-binding (RRM/RBD/RNP motifs) family protein 0.75 0.31 -0.3
26 AT4G37190 LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 20
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Beta tubulin, autoregulation
binding site (InterPro:IPR013838), Misato Segment II,
myosin-like (InterPro:IPR019605), Tubulin/FtsZ, N-terminal
(InterPro:IPR019746); Has 345 Blast hits to 341 proteins in
161 species: Archae - 0; Bacteria - 0; Metazoa - 131; Fungi
- 140; Plants - 55; Viruses - 0; Other Eukaryotes - 19
(source: NCBI BLink).		 0.74 0.32 -0.31
27 AT3G07750 3'-5'-exoribonuclease family protein 0.74 0.3 -0.33
28 AT5G15750 Alpha-L RNA-binding motif/Ribosomal protein S4 family
protein		 0.74 0.32 -0.32
29 AT5G46920 Intron maturase, type II family protein 0.74 0.29 -0.31
30 AT2G25590 Plant Tudor-like protein -0.73 0.32 -0.29
31 AT1G32440 plastidial pyruvate kinase 3 plastidial pyruvate kinase 3 0.73 0.31 -0.33
32 AT3G01820 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.73 0.31 -0.32
33 AT1G06560 NOL1/NOP2/sun family protein 0.73 0.32 -0.34
34 AT3G61240 DEA(D/H)-box RNA helicase family protein 0.73 0.3 -0.31
35 AT1G04945 HIT-type Zinc finger family protein 0.73 0.32 -0.31
36 AT3G12770 mitochondrial editing factor 22 mitochondrial editing factor 22 0.73 0.31 -0.3
37 AT3G12130 KH domain-containing protein / zinc finger (CCCH type)
family protein		 0.73 0.32 -0.31
38 AT1G24310 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
nucleolus; EXPRESSED IN: 20 plant structures; EXPRESSED
DURING: 13 growth stages; Has 2922 Blast hits to 2454
proteins in 263 species: Archae - 0; Bacteria - 57; Metazoa
- 1043; Fungi - 654; Plants - 388; Viruses - 11; Other
Eukaryotes - 769 (source: NCBI BLink).		 0.73 0.32 -0.3
39 AT2G03820 nonsense-mediated mRNA decay NMD3 family protein 0.73 0.3 -0.3
40 AT3G27390 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G40640.1); Has 101 Blast
hits to 99 proteins in 12 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 101; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.72 0.32 -0.32
41 AT1G53035 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G15358.1); Has 49 Blast hits to 49 proteins in 9
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.72 0.32 -0.33
42 AT2G40430 CONTAINS InterPro DOMAIN/s: P60-like (InterPro:IPR011687),
Tumour suppressor protein Gltscr2 (InterPro:IPR011211); Has
709 Blast hits to 643 proteins in 201 species: Archae - 0;
Bacteria - 32; Metazoa - 224; Fungi - 154; Plants - 45;
Viruses - 0; Other Eukaryotes - 254 (source: NCBI BLink).		 0.72 0.33 -0.3
43 AT1G22730 MA3 domain-containing protein 0.72 0.31 -0.29
44 AT1G79540 Pentatricopeptide repeat (PPR) superfamily protein 0.72 0.32 -0.3
45 AT4G30990 ARM repeat superfamily protein 0.72 0.3 -0.29
46 AT3G63400 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family
protein		 0.72 0.32 -0.31
47 AT1G31010 organellar single-stranded DNA binding protein 4 organellar single-stranded DNA
binding protein 4		 0.72 0.32 -0.32
48 AT4G36020 cold shock domain protein 1 cold shock domain protein 1 0.72 0.34 -0.3
49 AT1G19370 unknown protein; LOCATED IN: endoplasmic reticulum;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT1G75140.1); Has 45 Blast hits to 43
proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes -
1 (source: NCBI BLink).		 0.72 0.3 -0.33
50 AT5G05920 deoxyhypusine synthase deoxyhypusine synthase, embryo sac
development arrest 22		 0.72 0.3 -0.31
51 AT5G19680 Leucine-rich repeat (LRR) family protein 0.71 0.32 -0.34
52 AT3G04470 Ankyrin repeat family protein 0.71 0.33 -0.31
53 AT1G14650 SWAP (Suppressor-of-White-APricot)/surp domain-containing
protein / ubiquitin family protein		 0.71 0.31 -0.32
54 AT5G09420 translocon at the outer membrane of chloroplasts 64-V AtmtOM64, translocon at the outer
membrane of chloroplasts 64-V,
ARABIDOPSIS THALIANA TRANSLOCON AT
THE OUTER MEMBRANE OF CHLOROPLASTS
64-V, outer membrane 64,
translocon at the outer membrane
of chloroplasts 64-V		 0.71 0.29 -0.3
55 AT1G02960 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G02965.1); Has 83 Blast hits
to 82 proteins in 37 species: Archae - 0; Bacteria - 2;
Metazoa - 20; Fungi - 7; Plants - 29; Viruses - 0; Other
Eukaryotes - 25 (source: NCBI BLink).		 -0.71 0.34 -0.33
56 AT4G28540 casein kinase I-like 6 casein kinase I-like 6, PAPK1 0.71 0.3 -0.32
57 AT3G02490 Pentatricopeptide repeat (PPR) superfamily protein 0.71 0.31 -0.31
58 AT1G20300 Pentatricopeptide repeat (PPR) superfamily protein 0.71 0.3 -0.31
59 AT2G47420 Ribosomal RNA adenine dimethylase family protein adenosine dimethyl transferase 1A 0.71 0.33 -0.35
60 AT2G01860 Tetratricopeptide repeat (TPR)-like superfamily protein EMBRYO DEFECTIVE 975 0.71 0.31 -0.3
61 AT5G47720 Thiolase family protein -0.68 0.31 -0.31
62 AT3G16700 Fumarylacetoacetate (FAA) hydrolase family -0.67 0.33 -0.3
63 AT3G13672 TRAF-like superfamily protein -0.67 0.33 -0.31
64 AT1G48430 Dihydroxyacetone kinase -0.65 0.32 -0.32
65 AT3G59300 Pentatricopeptide repeat (PPR) superfamily protein -0.63 0.31 -0.31
66 AT5G66420 CONTAINS InterPro DOMAIN/s: Uncharacterised conserved
protein UCP033271 (InterPro:IPR008322), TIM-barrel signal
transduction protein, predicted (InterPro:IPR009215); Has
30201 Blast hits to 17322 proteins in 780 species: Archae -
12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants
- 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.61 0.33 -0.3
67 AT4G13985 FBD-associated F-box protein FBD-associated F-box protein -0.59 0.33 -0.32
68 AT2G39435 Phosphatidylinositol N-acetyglucosaminlytransferase subunit
P-related		 -0.58 0.33 -0.32
69 AT2G47120 NAD(P)-binding Rossmann-fold superfamily protein -0.58 0.31 -0.31
70 AT3G24040 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 -0.58 0.34 -0.34
71 AT2G18470 roline-rich extensin-like receptor kinase 4 proline-rich extensin-like
receptor kinase 4, proline-rich
extensin-like receptor kinase 4		 -0.57 0.32 -0.3