AT4G38240 : COMPLEX GLYCAN LESS
Query Information
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AGICode AT4G38240
Description alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase, putative
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G38240 alpha-1,3-mannosyl-glycoprotein
beta-1,2-N-acetylglucosaminyltransferase, putative		 COMPLEX GLYCAN LESS, COMPLEX
GLYCAN LESS 1,
N-ACETYLGLUCOSAMINYLTRANSFERASE I		 1 0.31 -0.32
2 AT4G35650 isocitrate dehydrogenase III isocitrate dehydrogenase III 0.67 0.33 -0.33
3 AT3G51490 tonoplast monosaccharide transporter3 tonoplast monosaccharide
transporter3		 -0.66 0.33 -0.3
4 AT3G18380 sequence-specific DNA binding transcription
factors;sequence-specific DNA binding		 SAWADEE homeodomain homolog 2 -0.66 0.31 -0.31
5 AT3G15510 NAC domain containing protein 2 Arabidopsis NAC domain containing
protein 56, NAC domain containing
protein 2, NAC domain containing
protein 2, NAC-REGULATED SEED
MORPHOLOGY 1		 0.64 0.33 -0.31
6 AT2G40540 potassium transporter 2 ATKT2, ATKUP2, potassium
transporter 2, KUP2, SHY3, TRK2		 -0.63 0.31 -0.32
7 AT2G10620 transposable element gene -0.63 0.31 -0.32
8 AT2G09910 transposable element gene -0.63 0.3 -0.32
9 AT2G36010 E2F transcription factor 3 ATE2FA, E2F transcription factor 3 -0.63 0.31 -0.32
10 AT2G33680 Tetratricopeptide repeat (TPR)-like superfamily protein -0.62 0.32 -0.31
11 AT5G40450 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, plasma membrane; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 13 growth stages; Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.61 0.3 -0.29
12 AT4G02600 Seven transmembrane MLO family protein MILDEW RESISTANCE LOCUS O 1, MLO1 0.61 0.29 -0.32
13 AT2G15420 myosin heavy chain-related 0.61 0.32 -0.31
14 AT3G09370 myb domain protein 3r-3 myb domain protein 3R3, myb domain
protein 3r-3		 -0.61 0.33 -0.32
15 AT4G29190 Zinc finger C-x8-C-x5-C-x3-H type family protein Arabidopsis thaliana
oxidation-related zinc finger 2,
oxidation-related zinc finger 2		 -0.61 0.31 -0.33
16 AT2G32590 LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures;
EXPRESSED DURING: 9 growth stages; CONTAINS InterPro
DOMAIN/s: Barren (InterPro:IPR008418); Has 467 Blast hits
to 447 proteins in 202 species: Archae - 0; Bacteria - 4;
Metazoa - 147; Fungi - 168; Plants - 39; Viruses - 1; Other
Eukaryotes - 108 (source: NCBI BLink).		 EMBRYO DEFECTIVE 2795 -0.6 0.3 -0.33
17 AT3G04550 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN:
22 plant structures; EXPRESSED DURING: 13 growth stages;
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G28500.1); Has 110 Blast hits to 110 proteins in
51 species: Archae - 0; Bacteria - 67; Metazoa - 1; Fungi -
0; Plants - 41; Viruses - 0; Other Eukaryotes - 1 (source:
NCBI BLink).		 -0.6 0.3 -0.34
18 AT2G42000 Plant EC metallothionein-like protein, family 15 Arabidopsis thaliana
metallothionein 4a		 -0.6 0.31 -0.35
19 AT1G05710 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.59 0.33 -0.33
20 AT3G03970 ARM repeat superfamily protein -0.59 0.31 -0.32
21 AT1G03410 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 2A6 0.59 0.33 -0.31
22 AT2G46450 cyclic nucleotide-gated channel 12 cyclic nucleotide-gated channel
12, cyclic nucleotide-gated
channel 12		 0.59 0.32 -0.32
23 AT4G16442 Uncharacterised protein family (UPF0497) -0.59 0.31 -0.33
24 AT2G45660 AGAMOUS-like 20 AGAMOUS-like 20, SUPPRESSOR OF
OVEREXPRESSION OF CO 1, SUPPRESSOR
OF OVEREXPRESSION OF CO 1		 -0.58 0.3 -0.33
25 AT1G24390 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.58 0.31 -0.31
26 AT5G44260 Zinc finger C-x8-C-x5-C-x3-H type family protein -0.58 0.33 -0.31
27 AT4G28590 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10
growth stages; BEST Arabidopsis thaliana protein match is:
Thioredoxin superfamily protein (TAIR:AT2G31840.1); Has 114
Blast hits to 112 proteins in 39 species: Archae - 2;
Bacteria - 0; Metazoa - 17; Fungi - 6; Plants - 67; Viruses
- 0; Other Eukaryotes - 22 (source: NCBI BLink).		 Mesophyll-cell RNAi Library line 7 -0.57 0.33 -0.32
28 AT1G51460 ABC-2 type transporter family protein ATP-binding cassette G13 -0.57 0.33 -0.3
29 AT2G39620 Pentatricopeptide repeat (PPR) superfamily protein -0.57 0.3 -0.3
30 AT4G23860 PHD finger protein-related -0.57 0.34 -0.33
31 AT3G27960 Tetratricopeptide repeat (TPR)-like superfamily protein 0.56 0.33 -0.32
32 AT2G20950 Arabidopsis phospholipase-like protein (PEARLI 4) family 0.56 0.33 -0.29
33 AT5G27670 histone H2A 7 histone H2A 7 -0.56 0.31 -0.32
34 AT1G34150 Pseudouridine synthase family protein 0.55 0.33 -0.3
35 AT1G53350 Disease resistance protein (CC-NBS-LRR class) family -0.55 0.32 -0.3
36 AT3G20650 mRNA capping enzyme family protein 0.55 0.32 -0.3
37 AT3G12060 Plant protein of unknown function (DUF828) TRICHOME BIREFRINGENCE-LIKE 1 -0.55 0.3 -0.34
38 AT1G73710 Pentatricopeptide repeat (PPR) superfamily protein -0.55 0.3 -0.29
39 AT3G02400 SMAD/FHA domain-containing protein -0.54 0.3 -0.31
40 AT5G48100 Laccase/Diphenol oxidase family protein ATLAC15, LACCASE-LIKE 15,
TRANSPARENT TESTA 10		 0.54 0.33 -0.32
41 AT2G48080 oxidoreductase, 2OG-Fe(II) oxygenase family protein 0.54 0.31 -0.31
42 AT2G20070 FUNCTIONS IN: molecular_function unknown; LOCATED IN:
endomembrane system; BEST Arabidopsis thaliana protein
match is: low-molecular-weight cysteine-rich 81
(TAIR:AT2G25295.1); Has 10 Blast hits to 10 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 10; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.54 0.34 -0.3
43 AT1G55760 BTB/POZ domain-containing protein -0.54 0.29 -0.31
44 AT5G19640 Major facilitator superfamily protein -0.53 0.3 -0.32
45 AT2G16110 pseudogene, similar to putative AP endonuclease/reverse
transcriptase, blastp match of 34% identity and 5.9e-45
P-value to GP|21952510|gb|AAM82604.1|AF525305_2|AF525305
putative AP endonuclease/reverse transcriptase {Brassica
napus}		 -0.53 0.31 -0.31
46 AT1G33580 transposable element gene 0.53 0.31 -0.3
47 AT5G01490 cation exchanger 4 ATCAX4, cation exchanger 4 0.53 0.29 -0.3
48 AT2G41050 PQ-loop repeat family protein / transmembrane family
protein		 -0.53 0.33 -0.33
49 AT1G32040 transposable element gene -0.52 0.32 -0.32
50 AT5G15581 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: leaf apex; Has
30201 Blast hits to 17322 proteins in 780 species: Archae -
12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants
- 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.52 0.33 -0.32
51 AT1G44060 transposable element gene -0.52 0.32 -0.31
52 AT1G48560 unknown protein; Has 75 Blast hits to 71 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0;
Plants - 69; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.52 0.31 -0.32
53 AT5G65610 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.52 0.32 -0.3
54 AT4G02960 transposable element gene retro element 2, retro element 2 -0.52 0.31 -0.32
55 AT2G11830 transposable element gene -0.52 0.31 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
56 C0016 S-Adenosylmethionine S-Adenosyl-L-methionine S-Adenosyl-L-methionine ethylene biosynthesis I (plants),
scopoletin biosynthesis,
quercetinsulphates biosynthesis,
siroheme biosynthesis,
gibberellin inactivation II (methylation),
suberin biosynthesis,
volatile benzenoid biosynthesis I (ester formation),
S-adenosyl-L-methionine cycle II,
methylhalides biosynthesis (plants),
S-methylmethionine cycle,
ubiquinol-9 biosynthesis (eukaryotic),
nicotianamine biosynthesis,
methionine biosynthesis II,
spermine biosynthesis,
choline biosynthesis II,
diphthamide biosynthesis,
homogalacturonan biosynthesis,
phosphatidylcholine biosynthesis II,
methylquercetin biosynthesis,
plastoquinol biosynthesis,
chlorophyllide a biosynthesis I,
ferulate and sinapate biosynthesis,
ubiquinol-10 biosynthesis (eukaryotic),
phenylpropanoid biosynthesis,
free phenylpropanoid acid biosynthesis,
seleno-amino acid detoxification and volatilization I,
plant sterol biosynthesis,
lipoate biosynthesis and incorporation I,
methyl indole-3-acetate interconversion,
cyclopropane and cyclopropene fatty acid biosynthesis,
spermidine biosynthesis I,
thiamine biosynthesis II,
methionine salvage pathway,
spermidine hydroxycinnamic acid conjugates biosynthesis,
simple coumarins biosynthesis,
phosphatidylcholine biosynthesis IV,
glutathione-mediated detoxification II,
S-adenosyl-L-methionine biosynthesis,
methionine degradation I (to homocysteine),
phosphatidylcholine biosynthesis III,
phylloquinol biosynthesis,
choline biosynthesis I,
biotin biosynthesis II,
vitamin E biosynthesis 		-0.74 0.46 -0.44 C0016