AGICode | AT4G37445 |
Description | BEST Arabidopsis thaliana protein match is: Calcium-binding EF hand family protein (TAIR:AT1G64850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT4G37445 | BEST Arabidopsis thaliana protein match is: Calcium-binding EF hand family protein (TAIR:AT1G64850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
1 | 0.31 | -0.32 | |||
2 | AT1G23220 | Dynein light chain type 1 family protein | 0.8 | 0.33 | -0.29 | |||
3 | AT3G62730 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, LP.02 two leaves visible, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G47980.1); Has 172 Blast hits to 172 proteins in 41 species: Archae - 0; Bacteria - 73; Metazoa - 0; Fungi - 0; Plants - 99; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.79 | 0.3 | -0.32 | |||
4 | AT5G62360 | Plant invertase/pectin methylesterase inhibitor superfamily protein |
0.73 | 0.35 | -0.33 | |||
5 | AT3G16100 | RAB GTPase homolog G3C | ATRAB7D, RAB GTPase homolog G3C, RAB GTPase homolog G3C |
0.72 | 0.31 | -0.32 | ||
6 | AT4G34460 | GTP binding protein beta 1 | GTP binding protein beta 1, ATAGB1, ERECTA-LIKE 4 |
0.72 | 0.32 | -0.3 | ||
7 | AT1G71750 | Hypoxanthine-guanine phosphoribosyltransferase | Hypoxanthine-guanine phosphoribosyltransferase |
0.71 | 0.31 | -0.32 | ||
8 | AT4G01710 | ARP2/3 complex 16 kDa subunit (p16-Arc) | ARPC5, CROOKED | 0.7 | 0.32 | -0.31 | ||
9 | AT4G11260 | phosphatase-related | ATSGT1B, ENHANCED DOWNY MILDEW 1, ENHANCER OF TIR1-1 AUXIN RESISTANCE 3, RPR1, SGT1B |
0.7 | 0.3 | -0.31 | ||
10 | AT3G13520 | arabinogalactan protein 12 | arabinogalactan protein 12, ATAGP12 |
0.7 | 0.31 | -0.33 | ||
11 | AT5G36910 | thionin 2.2 | thionin 2.2 | 0.7 | 0.32 | -0.32 | ||
12 | AT1G31940 | unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G35585.1); Has 67 Blast hits to 67 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.7 | 0.32 | -0.3 | |||
13 | AT5G40960 | Protein of unknown function (DUF 3339) | -0.7 | 0.31 | -0.32 | |||
14 | AT2G25780 | Protein of unknown function (DUF1677) | 0.69 | 0.32 | -0.31 | |||
15 | AT2G22660 | Protein of unknown function (duplicated DUF1399) | -0.69 | 0.32 | -0.31 | |||
16 | AT5G24130 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: petal, leaf whorl, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.68 | 0.31 | -0.33 | |||
17 | AT5G03370 | acylphosphatase family | 0.68 | 0.32 | -0.31 | |||
18 | AT1G15330 | Cystathionine beta-synthase (CBS) protein | -0.68 | 0.31 | -0.31 | |||
19 | AT1G23120 | Polyketide cyclase/dehydrase and lipid transport superfamily protein |
-0.67 | 0.32 | -0.32 | |||
20 | AT3G52220 | CONTAINS InterPro DOMAIN/s: Kinase phosphorylation domain (InterPro:IPR019315); Has 8882 Blast hits to 4920 proteins in 346 species: Archae - 10; Bacteria - 184; Metazoa - 3955; Fungi - 1221; Plants - 712; Viruses - 24; Other Eukaryotes - 2776 (source: NCBI BLink). |
0.67 | 0.32 | -0.34 | |||
21 | AT1G02700 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02140.1); Has 49 Blast hits to 49 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 6; Plants - 29; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). |
-0.67 | 0.31 | -0.31 | |||
22 | AT5G07710 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein |
0.67 | 0.33 | -0.31 | |||
23 | AT4G01790 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.67 | 0.32 | -0.32 | |||
24 | AT1G57850 | Toll-Interleukin-Resistance (TIR) domain family protein | 0.67 | 0.3 | -0.31 | |||
25 | AT1G21920 | Histone H3 K4-specific methyltransferase SET7/9 family protein |
-0.66 | 0.31 | -0.31 | |||
26 | AT5G16320 | FRIGIDA like 1 | FRIGIDA like 1 | 0.66 | 0.31 | -0.31 | ||
27 | AT3G10740 | alpha-L-arabinofuranosidase 1 | ALPHA-L-ARABINOFURANOSIDASE, ALPHA-L-ARABINOFURANOSIDASE 1, alpha-L-arabinofuranosidase 1, ARABIDOPSIS THALIANA ALPHA-L-ARABINOFURANOSIDASE 1 |
-0.66 | 0.33 | -0.3 | ||
28 | AT2G04410 | RPM1-interacting protein 4 (RIN4) family protein | 0.66 | 0.29 | -0.31 | |||
29 | AT2G26940 | C2H2-type zinc finger family protein | 0.65 | 0.33 | -0.32 | |||
30 | AT5G49440 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.65 | 0.3 | -0.33 | |||
31 | AT2G04330 | transposable element gene | -0.65 | 0.3 | -0.31 | |||
32 | AT2G30500 | Kinase interacting (KIP1-like) family protein | -0.65 | 0.31 | -0.31 | |||
33 | AT4G17760 | damaged DNA binding;exodeoxyribonuclease IIIs | 0.64 | 0.3 | -0.31 | |||
34 | AT3G53260 | phenylalanine ammonia-lyase 2 | ATPAL2, phenylalanine ammonia-lyase 2 |
0.64 | 0.32 | -0.32 | ||
35 | AT2G31380 | salt tolerance homologue | salt tolerance homologue | 0.64 | 0.32 | -0.33 | ||
36 | AT1G04800 | glycine-rich protein | 0.64 | 0.32 | -0.33 | |||
37 | AT5G15900 | TRICHOME BIREFRINGENCE-LIKE 19 | TRICHOME BIREFRINGENCE-LIKE 19 | 0.63 | 0.31 | -0.31 | ||
38 | AT2G10760 | transposable element gene | -0.63 | 0.32 | -0.33 | |||
39 | AT1G47250 | 20S proteasome alpha subunit F2 | 20S proteasome alpha subunit F2 | 0.63 | 0.33 | -0.3 | ||
40 | AT3G25850 | Cysteine/Histidine-rich C1 domain family protein | 0.63 | 0.3 | -0.32 | |||
41 | AT1G63170 | Zinc finger, C3HC4 type (RING finger) family protein | 0.63 | 0.32 | -0.3 | |||
42 | AT5G01840 | ovate family protein 1 | ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 1, ovate family protein 1 |
-0.63 | 0.32 | -0.31 | ||
43 | AT1G14940 | Polyketide cyclase/dehydrase and lipid transport superfamily protein |
0.63 | 0.31 | -0.31 | |||
44 | AT5G25360 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32342.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.63 | 0.29 | -0.3 | |||
45 | AT5G14890 | NHL domain-containing protein | 0.63 | 0.3 | -0.32 | |||
46 | AT4G25510 | unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.63 | 0.31 | -0.32 | |||
47 | AT3G63420 | Ggamma-subunit 1 | Ggamma-subunit 1, ATAGG1, Ggamma-subunit 1 |
0.63 | 0.33 | -0.32 | ||
48 | AT2G26830 | Protein kinase superfamily protein | embryo defective 1187 | 0.63 | 0.32 | -0.33 | ||
49 | AT1G58100 | TCP family transcription factor | TCP domain protein 8 | 0.63 | 0.33 | -0.32 | ||
50 | AT1G55450 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
0.62 | 0.32 | -0.3 | |||
51 | AT1G50090 | D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein |
0.62 | 0.3 | -0.33 | |||
52 | AT5G25840 | Protein of unknown function (DUF1677) | 0.62 | 0.35 | -0.3 | |||
53 | AT2G11140 | transposable element gene | 0.62 | 0.29 | -0.32 | |||
54 | AT2G27410 | Domain of unknown function (DUF313) | 0.62 | 0.3 | -0.31 | |||
55 | AT5G51690 | 1-amino-cyclopropane-1-carboxylate synthase 12 | 1-amino-cyclopropane-1-carboxylate synthase 12 |
-0.62 | 0.31 | -0.32 | ||
56 | AT5G43360 | phosphate transporter 1;3 | ATPT4, phosphate transporter 1;3, PHOSPHATE TRANSPORTER 3 |
0.62 | 0.31 | -0.3 | ||
57 | ATMG00060 | NADH dehydrogenase subunit 5C | NADH DEHYDROGENASE SUBUNIT 5, NADH DEHYDROGENASE SUBUNIT 5.3, NADH dehydrogenase subunit 5C |
-0.62 | 0.32 | -0.29 | ||
58 | AT3G54320 | Integrase-type DNA-binding superfamily protein | ACTIVATOR OF SPO(MIN)::LUC1, ATWRI1, WRINKLED, WRINKLED 1 |
-0.62 | 0.3 | -0.34 | ||
59 | AT1G10310 | NAD(P)-binding Rossmann-fold superfamily protein | 0.62 | 0.3 | -0.35 | |||
60 | AT3G51040 | RTE1-homolog | RTE1-homolog | 0.62 | 0.31 | -0.32 | ||
61 | AT5G09920 | RNA polymerase II, Rpb4, core protein | ATRPB15.9, NRPB4, RPB15.9, RPB15.9.9 |
0.62 | 0.33 | -0.32 | ||
62 | AT1G48310 | chromatin remodeling factor18 | CHA18, chromatin remodeling factor18 |
-0.61 | 0.32 | -0.33 | ||
63 | AT4G11100 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G03060.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.61 | 0.31 | -0.31 | |||
64 | AT5G06520 | SWAP (Suppressor-of-White-APricot)/surp domain-containing protein |
0.61 | 0.32 | -0.3 | |||
65 | AT1G69430 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G26650.1); Has 216 Blast hits to 215 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 216; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.61 | 0.3 | -0.32 | |||
66 | AT2G28970 | Leucine-rich repeat protein kinase family protein | 0.61 | 0.34 | -0.31 | |||
67 | AT5G25370 | phospholipase D alpha 3 | phospholipase D alpha 3 | 0.61 | 0.33 | -0.32 | ||
68 | AT4G17720 | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.61 | 0.3 | -0.3 | |||
69 | AT1G04290 | Thioesterase superfamily protein | 0.61 | 0.32 | -0.31 | |||
70 | AT1G68750 | phosphoenolpyruvate carboxylase 4 | phosphoenolpyruvate carboxylase 4, phosphoenolpyruvate carboxylase 4 |
-0.6 | 0.32 | -0.3 | ||
71 | AT3G61340 | F-box and associated interaction domains-containing protein | 0.6 | 0.32 | -0.32 | |||
72 | AT4G07480 | transposable element gene | 0.6 | 0.31 | -0.31 | |||
73 | AT1G48130 | 1-cysteine peroxiredoxin 1 | 1-cysteine peroxiredoxin 1, 1-cysteine peroxiredoxin 1 |
-0.6 | 0.3 | -0.3 | ||
74 | AT5G47310 | PPPDE putative thiol peptidase family protein | 0.6 | 0.3 | -0.33 | |||
75 | AT5G20580 | BEST Arabidopsis thaliana protein match is: FRIGIDA interacting protein 1 (TAIR:AT2G06005.1); Has 167 Blast hits to 167 proteins in 73 species: Archae - 0; Bacteria - 25; Metazoa - 58; Fungi - 25; Plants - 43; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). |
0.6 | 0.33 | -0.32 | |||
76 | AT2G26970 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein |
0.6 | 0.31 | -0.32 | |||
77 | AT1G73970 | unknown protein; Has 34 Blast hits to 33 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
-0.6 | 0.32 | -0.33 | |||
78 | AT5G25900 | GA requiring 3 | ARABIDOPSIS THALIANA ENT-KAURENE OXIDASE 1, CYTOCHROME P450 701 A3, GA requiring 3 |
-0.6 | 0.32 | -0.32 | ||
79 | AT3G62330 | Zinc knuckle (CCHC-type) family protein | -0.6 | 0.3 | -0.31 | |||
80 | AT4G18920 | Protein of unknown function (DUF1264) | 0.6 | 0.31 | -0.32 | |||
81 | AT1G09930 | oligopeptide transporter 2 | oligopeptide transporter 2, oligopeptide transporter 2 |
0.6 | 0.32 | -0.32 | ||
82 | AT5G25990 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT5G25970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.6 | 0.32 | -0.31 | |||
83 | AT1G31030 | transposable element gene | -0.59 | 0.31 | -0.31 | |||
84 | AT4G18395 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.59 | 0.3 | -0.33 | |||
85 | AT2G12720 | transposable element gene | -0.59 | 0.28 | -0.31 | |||
86 | AT3G32080 | transposable element gene | -0.59 | 0.34 | -0.3 | |||
87 | AT5G54350 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT5G54360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.58 | 0.32 | -0.34 | |||
88 | AT1G60140 | trehalose phosphate synthase | trehalose phosphate synthase, trehalose phosphate synthase, TREHALOSE PHOSPHATE SYNTHASE 10 |
-0.58 | 0.3 | -0.3 | ||
89 | AT4G15460 | glycine-rich protein | -0.58 | 0.31 | -0.31 | |||
90 | AT5G15070 | Phosphoglycerate mutase-like family protein | -0.57 | 0.28 | -0.33 | |||
91 | AT4G14840 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G22520.1); Has 1681 Blast hits to 1532 proteins in 283 species: Archae - 19; Bacteria - 179; Metazoa - 579; Fungi - 131; Plants - 223; Viruses - 5; Other Eukaryotes - 545 (source: NCBI BLink). |
-0.57 | 0.32 | -0.32 | |||
92 | AT3G49820 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65925.1); Has 23 Blast hits to 23 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.57 | 0.32 | -0.33 | |||
93 | AT2G23240 | Plant EC metallothionein-like protein, family 15 | Arabidopsis thaliana metallothionein 4b |
-0.57 | 0.31 | -0.3 | ||
94 | AT2G41620 | Nucleoporin interacting component (Nup93/Nic96-like) family protein |
-0.56 | 0.32 | -0.32 | |||
95 | AT2G13270 | transposable element gene | -0.56 | 0.31 | -0.3 | |||
96 | AT4G22400 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G18320.2); Has 44 Blast hits to 44 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.55 | 0.33 | -0.29 | |||
97 | AT4G15040 | Subtilisin-like serine endopeptidase family protein | -0.54 | 0.31 | -0.31 | |||
98 | AT2G07728 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.54 | 0.31 | -0.31 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
99 | C0052 | Adenosine | - | Adenosine | adenine and adenosine salvage VI, S-adenosyl-L-methionine cycle II, cytokinins degradation, methionine degradation I (to homocysteine), adenine and adenosine salvage II |
-0.62 | 0.31 | -0.3 | ||
100 | C0140 | Lysine | L-Lysine | L-Lysine | lysine degradation II, tRNA charging, lysine biosynthesis VI, lysine degradation I |
-0.55 | 0.3 | -0.33 |