AGICode | AT4G36280 |
Description | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT4G36280 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein |
1 | 0.34 | -0.32 | |||
2 | AT3G46060 | RAB GTPase homolog 8A | ARA-3, ARA3, RAB GTPase homolog 8A, ATRABE1C, RAB GTPase homolog 8A, RABE1c |
-0.75 | 0.3 | -0.29 | ||
3 | AT3G12030 | Protein of unknown function DUF106, transmembrane | -0.75 | 0.3 | -0.31 | |||
4 | AT4G27000 | RNA-binding (RRM/RBD/RNP motifs) family protein | ATRBP45C | -0.73 | 0.33 | -0.32 | ||
5 | AT4G01320 | Peptidase family M48 family protein | ATSTE24, STE24 | -0.73 | 0.33 | -0.31 | ||
6 | AT5G19680 | Leucine-rich repeat (LRR) family protein | -0.73 | 0.31 | -0.3 | |||
7 | AT4G31340 | myosin heavy chain-related | -0.72 | 0.31 | -0.32 | |||
8 | AT4G17360 | Formyl transferase | 0.72 | 0.31 | -0.33 | |||
9 | AT1G53460 | BEST Arabidopsis thaliana protein match is: Ran BP2/NZF zinc finger-like superfamily protein (TAIR:AT1G70650.2); Has 485 Blast hits to 413 proteins in 88 species: Archae - 11; Bacteria - 27; Metazoa - 119; Fungi - 17; Plants - 101; Viruses - 2; Other Eukaryotes - 208 (source: NCBI BLink). |
-0.71 | 0.31 | -0.3 | |||
10 | AT5G13780 | Acyl-CoA N-acyltransferases (NAT) superfamily protein | -0.7 | 0.33 | -0.31 | |||
11 | AT5G27730 | Protein of unknown function (DUF1624) | 0.7 | 0.32 | -0.32 | |||
12 | AT3G03950 | evolutionarily conserved C-terminal region 1 | evolutionarily conserved C-terminal region 1 |
-0.7 | 0.32 | -0.32 | ||
13 | AT4G39820 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.7 | 0.31 | -0.32 | |||
14 | AT2G35790 | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1301 (InterPro:IPR009724); Has 116 Blast hits to 116 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 53; Fungi - 6; Plants - 49; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). |
-0.69 | 0.31 | -0.31 | |||
15 | AT4G01850 | S-adenosylmethionine synthetase 2 | AtSAM2, MAT2, S-adenosylmethionine synthetase 2, S-ADENOSYLMETHIONINE SYNTHETASE 2 |
-0.69 | 0.32 | -0.35 | ||
16 | AT2G05270 | unknown protein; Has 3 Blast hits to 3 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.69 | 0.32 | -0.31 | |||
17 | AT4G37190 | LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta tubulin, autoregulation binding site (InterPro:IPR013838), Misato Segment II, myosin-like (InterPro:IPR019605), Tubulin/FtsZ, N-terminal (InterPro:IPR019746); Has 345 Blast hits to 341 proteins in 161 species: Archae - 0; Bacteria - 0; Metazoa - 131; Fungi - 140; Plants - 55; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). |
-0.68 | 0.32 | -0.32 | |||
18 | AT3G57360 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02370.2); Has 122 Blast hits to 122 proteins in 54 species: Archae - 0; Bacteria - 0; Metazoa - 74; Fungi - 4; Plants - 41; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). |
-0.68 | 0.3 | -0.3 | |||
19 | AT1G26150 | proline-rich extensin-like receptor kinase 10 | proline-rich extensin-like receptor kinase 10, proline-rich extensin-like receptor kinase 10 |
0.68 | 0.28 | -0.32 | ||
20 | AT5G45760 | Transducin/WD40 repeat-like superfamily protein | 0.68 | 0.3 | -0.32 | |||
21 | AT2G30260 | U2 small nuclear ribonucleoprotein B | U2 small nuclear ribonucleoprotein B |
-0.68 | 0.33 | -0.3 | ||
22 | AT1G11410 | S-locus lectin protein kinase family protein | 0.68 | 0.32 | -0.31 | |||
23 | AT1G71780 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 34 Blast hits to 34 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.68 | 0.31 | -0.31 | |||
24 | AT3G01210 | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.68 | 0.31 | -0.32 | |||
25 | AT3G11770 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein |
-0.68 | 0.31 | -0.33 | |||
26 | AT1G62250 | unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; Has 30 Blast hits to 30 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.68 | 0.33 | -0.3 | |||
27 | AT3G17090 | Protein phosphatase 2C family protein | -0.68 | 0.32 | -0.31 | |||
28 | AT5G16930 | AAA-type ATPase family protein | -0.67 | 0.31 | -0.32 | |||
29 | AT2G47970 | Nuclear pore localisation protein NPL4 | -0.67 | 0.28 | -0.33 | |||
30 | AT1G07210 | Ribosomal protein S18 | -0.67 | 0.31 | -0.3 | |||
31 | AT2G46900 | CONTAINS InterPro DOMAIN/s: Basic helix-loop-helix, Nulp1-type (InterPro:IPR006994); Has 2929 Blast hits to 2464 proteins in 333 species: Archae - 2; Bacteria - 151; Metazoa - 913; Fungi - 372; Plants - 141; Viruses - 47; Other Eukaryotes - 1303 (source: NCBI BLink). |
-0.66 | 0.33 | -0.31 | |||
32 | AT5G59090 | subtilase 4.12 | subtilase 4.12, subtilase 4.12 | -0.66 | 0.3 | -0.33 | ||
33 | AT1G20200 | PAM domain (PCI/PINT associated module) protein | EMBRYO DEFECTIVE 2719, HAPLESS 15 | -0.66 | 0.31 | -0.33 | ||
34 | AT1G36050 | Endoplasmic reticulum vesicle transporter protein | -0.66 | 0.33 | -0.31 | |||
35 | AT1G30580 | GTP binding | -0.66 | 0.34 | -0.31 | |||
36 | AT1G19520 | pentatricopeptide (PPR) repeat-containing protein | NUCLEAR FUSION DEFECTIVE 5 | -0.66 | 0.31 | -0.31 | ||
37 | AT1G17870 | ethylene-dependent gravitropism-deficient and yellow-green-like 3 |
ETHYLENE-DEPENDENT GRAVITROPISM-DEFICIENT AND YELLOW-GREEN-LIKE 3, ETHYLENE-DEPENDENT GRAVITROPISM-DEFICIENT AND YELLOW-GREEN-LIKE 3 |
0.65 | 0.33 | -0.32 | ||
38 | AT2G34140 | Dof-type zinc finger DNA-binding family protein | -0.65 | 0.3 | -0.32 | |||
39 | AT1G18480 | Calcineurin-like metallo-phosphoesterase superfamily protein |
AtSLP2, Shewenella-like protein phosphatase 2 |
-0.65 | 0.32 | -0.33 | ||
40 | AT1G41900 | transposable element gene | 0.65 | 0.33 | -0.33 | |||
41 | AT1G23830 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23840.1); Has 57 Blast hits to 52 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.65 | 0.34 | -0.31 | |||
42 | AT4G17060 | FRIGIDA interacting protein 2 | FRIGIDA interacting protein 2 | -0.64 | 0.31 | -0.32 | ||
43 | AT3G04780 | Protein of unknown function (DUF1000) | -0.64 | 0.3 | -0.31 | |||
44 | AT5G16490 | ROP-interactive CRIB motif-containing protein 4 | ROP-interactive CRIB motif-containing protein 4 |
0.64 | 0.34 | -0.31 | ||
45 | AT3G46200 | nudix hydrolase homolog 9 | nudix hydrolase homolog 9, nudix hydrolase homolog 9 |
0.64 | 0.32 | -0.32 | ||
46 | AT3G17465 | ribosomal protein L3 plastid | ribosomal protein L3 plastid | -0.64 | 0.31 | -0.31 | ||
47 | AT5G11250 | Disease resistance protein (TIR-NBS-LRR class) | 0.64 | 0.31 | -0.33 | |||
48 | AT4G02930 | GTP binding Elongation factor Tu family protein | -0.64 | 0.31 | -0.29 | |||
49 | AT4G34480 | O-Glycosyl hydrolases family 17 protein | 0.63 | 0.3 | -0.33 | |||
50 | AT1G01510 | NAD(P)-binding Rossmann-fold superfamily protein | ANGUSTIFOLIA | -0.63 | 0.3 | -0.32 | ||
51 | AT2G47550 | Plant invertase/pectin methylesterase inhibitor superfamily | -0.63 | 0.33 | -0.32 | |||
52 | AT1G10920 | NB-ARC domain-containing disease resistance protein | LOV1 | 0.63 | 0.31 | -0.32 | ||
53 | AT5G63400 | adenylate kinase 1 | adenylate kinase 1 | -0.63 | 0.32 | -0.32 | ||
54 | AT5G07890 | myosin heavy chain-related | 0.63 | 0.29 | -0.33 | |||
55 | AT5G21110 | unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.63 | 0.3 | -0.3 | |||
56 | AT3G05530 | regulatory particle triple-A ATPase 5A | ATS6A.2, regulatory particle triple-A ATPase 5A |
-0.63 | 0.31 | -0.32 | ||
57 | AT3G19630 | Radical SAM superfamily protein | -0.62 | 0.31 | -0.31 | |||
58 | AT3G16310 | mitotic phosphoprotein N' end (MPPN) family protein | -0.62 | 0.32 | -0.32 | |||
59 | AT4G03205 | Coproporphyrinogen III oxidase | hemf2 | 0.62 | 0.31 | -0.32 | ||
60 | AT2G14835 | RING/U-box superfamily protein | -0.62 | 0.33 | -0.3 | |||
61 | AT5G44710 | CONTAINS InterPro DOMAIN/s: Ribosomal protein S27/S33, mitochondrial (InterPro:IPR013219); Has 101 Blast hits to 101 proteins in 55 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 59; Plants - 26; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). |
-0.62 | 0.31 | -0.31 | |||
62 | AT5G62400 | unknown protein; Has 7 Blast hits to 7 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.62 | 0.31 | -0.32 | |||
63 | AT2G13335 | transposable element gene | -0.62 | 0.31 | -0.32 | |||
64 | AT3G59920 | RAB GDP dissociation inhibitor 2 | RAB GDP dissociation inhibitor 2, RAB GDP dissociation inhibitor 2 |
-0.62 | 0.31 | -0.31 | ||
65 | AT1G52070 | Mannose-binding lectin superfamily protein | -0.61 | 0.32 | -0.34 | |||
66 | AT4G02570 | cullin 1 | cullin 1, AUXIN RESISTANT 6, cullin 1 |
-0.61 | 0.3 | -0.3 | ||
67 | AT1G51590 | alpha-mannosidase 1 | ALPHA-MANNOSIDASE IB, alpha-mannosidase 1 |
-0.61 | 0.32 | -0.29 | ||
68 | AT3G03380 | DegP protease 7 | degradation of periplasmic proteins 7, DegP protease 7 |
-0.61 | 0.31 | -0.31 | ||
69 | AT1G76620 | Protein of unknown function, DUF547 | 0.61 | 0.32 | -0.31 | |||
70 | AT5G51130 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
-0.61 | 0.31 | -0.3 | |||
71 | AT1G14080 | fucosyltransferase 6 | ATFUT6, fucosyltransferase 6 | -0.6 | 0.3 | -0.31 | ||
72 | AT2G03220 | fucosyltransferase 1 | ARABIDOPSIS THALIANA FUCOSYLTRANSFERASE 1, ARABIDOPSIS THALIANA FUCOSYLTRANSFERASE 1, fucosyltransferase 1, MURUS 2 |
-0.6 | 0.32 | -0.33 | ||
73 | AT4G21170 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.6 | 0.3 | -0.32 | |||
74 | AT2G42350 | RING/U-box superfamily protein | -0.6 | 0.33 | -0.32 | |||
75 | AT1G75540 | salt tolerance homolog2 | B BOX 21, B-box domain protein 21, long hypocotyl under shade, salt tolerance homolog2 |
-0.6 | 0.31 | -0.3 | ||
76 | AT5G14400 | cytochrome P450, family 724, subfamily A, polypeptide 1 | cytochrome P450, family 724, subfamily A, polypeptide 1 |
0.6 | 0.3 | -0.34 | ||
77 | AT1G26270 | Phosphatidylinositol 3- and 4-kinase family protein | -0.6 | 0.33 | -0.3 | |||
78 | AT1G80800 | pseudogene, 40S ribosomal protein S12 (RPS12B), similar to ribosomal protein S12 GB:AAD39838 GI:5106775 from (Hordeum vulgare); blastp match of 65% identity and 4.7e-12 P-value to GP|23617253|dbj|BAC20920.1||AP005764 putative 40S ribosomal protein S12 {Oryza sativa (japonica cultivar-group)} |
0.6 | 0.31 | -0.32 | |||
79 | AT2G15700 | transposable element gene | 0.6 | 0.31 | -0.31 | |||
80 | AT3G55850 | Amidohydrolase family | LONG AFTER FAR-RED 3, LONG AFTER FAR-RED 3 ISOFORM 1, LAF3 ISOFORM 2 |
0.6 | 0.31 | -0.33 | ||
81 | AT2G20780 | Major facilitator superfamily protein | -0.59 | 0.31 | -0.3 | |||
82 | AT3G02420 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0121 (InterPro:IPR005344); Has 72 Blast hits to 71 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 60; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). |
-0.59 | 0.31 | -0.34 | |||
83 | AT4G09830 | Uncharacterised conserved protein UCP009193 | -0.59 | 0.29 | -0.31 | |||
84 | AT5G10540 | Zincin-like metalloproteases family protein | -0.59 | 0.31 | -0.31 | |||
85 | AT2G39580 | CONTAINS InterPro DOMAIN/s: Putative zinc-finger domain (InterPro:IPR019607); Has 249 Blast hits to 219 proteins in 85 species: Archae - 0; Bacteria - 144; Metazoa - 29; Fungi - 8; Plants - 50; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). |
0.59 | 0.32 | -0.33 | |||
86 | AT4G22930 | pyrimidin 4 | DIHYDROOROTASE, pyrimidin 4 | -0.59 | 0.32 | -0.32 | ||
87 | AT5G64710 | Putative endonuclease or glycosyl hydrolase | -0.59 | 0.32 | -0.32 | |||
88 | AT3G26350 | LOCATED IN: chloroplast; EXPRESSED IN: root, pedicel, carpel, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13050.1); Has 3534 Blast hits to 2704 proteins in 342 species: Archae - 6; Bacteria - 192; Metazoa - 1076; Fungi - 505; Plants - 1162; Viruses - 224; Other Eukaryotes - 369 (source: NCBI BLink). |
0.59 | 0.33 | -0.31 | |||
89 | AT1G64040 | type one serine/threonine protein phosphatase 3 | type one serine/threonine protein phosphatase 3 |
-0.58 | 0.31 | -0.31 | ||
90 | AT3G53680 | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain |
0.58 | 0.33 | -0.34 | |||
91 | AT1G75360 | unknown protein; Has 74 Blast hits to 71 proteins in 15 species: Archae - 0; Bacteria - 4; Metazoa - 4; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). |
0.58 | 0.32 | -0.31 | |||
92 | AT2G44880 | Pentatricopeptide repeat (PPR-like) superfamily protein | -0.58 | 0.31 | -0.33 | |||
93 | AT1G57540 | unknown protein; Has 29 Blast hits to 29 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.58 | 0.33 | -0.31 | |||
94 | AT1G19370 | unknown protein; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G75140.1); Has 45 Blast hits to 43 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
-0.58 | 0.32 | -0.3 | |||
95 | AT3G63480 | ATP binding microtubule motor family protein | 0.58 | 0.32 | -0.31 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
96 | C0009 | myo-Inositol | - | myo-Inositol | stachyose biosynthesis, UDP-D-glucuronate biosynthesis (from myo-inositol), 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza), D-myo-inositol (1,4,5)-trisphosphate degradation, galactosylcyclitol biosynthesis, D-myo-inositol (1,4,5)-trisphosphate biosynthesis, phytate degradation I, myo-inositol biosynthesis, ajugose biosynthesis I (galactinol-dependent), phospholipid biosynthesis II |
0.69 | 0.45 | -0.49 | ||
97 | C0193 | Pantothenic acid | D,L-Pantothenic acid | Pantothenate | pantothenate biosynthesis | 0.66 | 0.49 | -0.44 |