AT4G35800 : RNA polymerase II large subunit
Query Information
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AGICode AT4G35800
Description RNA polymerase II large subunit
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G35800 RNA polymerase II large subunit RNA polymerase II large subunit,
RNA POLYMERASE II LARGE SUBUNIT,
RNA_POL_II_LSRNA_POL_II_LS, RNA
POLYMERASE II LARGE SUBUNIT		 1 0.34 -0.31
2 AT5G01400 HEAT repeat-containing protein ENHANCED SILENCING PHENOTYPE 4 0.78 0.32 -0.31
3 AT4G34430 DNA-binding family protein SWITCH/SUCROSE NONFERMENTING 3D,
CHB3		 0.77 0.32 -0.31
4 AT5G11040 TRS120 AtTRS120, TRS120 0.73 0.32 -0.31
5 AT5G38560 Protein kinase superfamily protein proline-rich extensin-like
receptor kinase 8, proline-rich
extensin-like receptor kinase 8		 0.72 0.34 -0.33
6 AT3G03320 RNA-binding ASCH domain protein -0.71 0.32 -0.34
7 AT1G10390 Nucleoporin autopeptidase 0.71 0.29 -0.32
8 AT1G01960 SEC7-like guanine nucleotide exchange family protein embryo sac development arrest 10 0.7 0.31 -0.33
9 AT2G39480 P-glycoprotein 6 ATP-binding cassette B6,
P-glycoprotein 6		 0.7 0.3 -0.32
10 AT2G47980 sister-chromatid cohesion protein 3 SISTER-CHROMATID COHESION PROTEIN
3, sister-chromatid cohesion
protein 3		 0.7 0.31 -0.32
11 AT5G53440 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED
DURING: 15 growth stages; Has 1807 Blast hits to 1807
proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa
- 736; Fungi - 347; Plants - 385; Viruses - 0; Other
Eukaryotes - 339 (source: NCBI BLink).		 0.69 0.29 -0.32
12 AT4G17140 pleckstrin homology (PH) domain-containing protein 0.67 0.33 -0.31
13 AT1G05960 ARM repeat superfamily protein 0.67 0.32 -0.31
14 AT3G52890 KCBP-interacting protein kinase KCBP-interacting protein kinase 0.65 0.29 -0.33
15 AT1G73440 calmodulin-related -0.65 0.34 -0.3
16 AT5G64270 splicing factor, putative 0.65 0.31 -0.33
17 AT5G20370 serine-rich protein-related -0.65 0.32 -0.3
18 AT4G02480 AAA-type ATPase family protein 0.64 0.3 -0.31
19 AT3G50590 Transducin/WD40 repeat-like superfamily protein 0.64 0.31 -0.32
20 AT5G24710 Transducin/WD40 repeat-like superfamily protein 0.64 0.34 -0.3
21 AT2G02160 CCCH-type zinc finger family protein 0.64 0.28 -0.33
22 AT4G29620 Cytidine/deoxycytidylate deaminase family protein 0.64 0.33 -0.33
23 AT4G27710 cytochrome P450, family 709, subfamily B, polypeptide 3 cytochrome P450, family 709,
subfamily B, polypeptide 3		 -0.64 0.3 -0.3
24 AT2G36850 glucan synthase-like 8 GLUCAN SYNTHASE-LIKE 8, ATGSL8,
CHORUS, GSL08, glucan
synthase-like 8		 0.64 0.3 -0.29
25 AT4G00660 RNAhelicase-like 8 ATRH8, RNAhelicase-like 8 0.64 0.34 -0.3
26 AT1G21630 Calcium-binding EF hand family protein 0.63 0.32 -0.31
27 AT5G12350 Regulator of chromosome condensation (RCC1) family with
FYVE zinc finger domain		 0.63 0.31 -0.33
28 AT2G32910 DCD (Development and Cell Death) domain protein 0.63 0.33 -0.31
29 AT4G32760 ENTH/VHS/GAT family protein 0.62 0.32 -0.32
30 AT3G12680 floral homeotic protein (HUA1) ENHANCER OF AG-4 1 0.62 0.32 -0.31
31 AT2G16485 nucleic acid binding;zinc ion binding;DNA binding 0.62 0.32 -0.32
32 AT5G66740 Protein of unknown function (DUF620) -0.61 0.28 -0.33
33 AT2G44000 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 -0.61 0.34 -0.3
34 AT3G32940 RNA-binding KH domain-containing protein 0.61 0.32 -0.32
35 AT1G28420 homeobox-1 homeobox-1 0.6 0.31 -0.33
36 AT4G02750 Tetratricopeptide repeat (TPR)-like superfamily protein 0.6 0.33 -0.31
37 AT2G27950 Ring/U-Box superfamily protein 0.6 0.31 -0.3
38 AT4G03390 STRUBBELIG-receptor family 3 STRUBBELIG-receptor family 3 0.6 0.32 -0.32
39 AT5G23610 BEST Arabidopsis thaliana protein match is: SWITCH1
(TAIR:AT5G51330.1); Has 170 Blast hits to 162 proteins in
36 species: Archae - 3; Bacteria - 6; Metazoa - 6; Fungi -
4; Plants - 117; Viruses - 0; Other Eukaryotes - 34
(source: NCBI BLink).		 0.59 0.3 -0.32
40 AT5G63950 chromatin remodeling 24 chromatin remodeling 24 0.59 0.32 -0.31
41 AT3G10100 transposable element gene -0.59 0.28 -0.31
42 AT3G06010 Homeotic gene regulator ATCHR12 0.58 0.32 -0.32
43 AT2G15080 receptor like protein 19 receptor like protein 19, receptor
like protein 19		 -0.58 0.33 -0.35
44 AT4G18230 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Oligosaccharide biosynthesis protein Alg14 like
(InterPro:IPR013969); Has 640 Blast hits to 640 proteins in
277 species: Archae - 4; Bacteria - 281; Metazoa - 94;
Fungi - 127; Plants - 57; Viruses - 0; Other Eukaryotes -
77 (source: NCBI BLink).		 -0.58 0.31 -0.3
45 AT4G03550 glucan synthase-like 5 glucan synthase-like 5, ATGSL5,
GSL05, glucan synthase-like 5,
GLUCAN SYNTHASE-LIKE 5, POWDERY
MILDEW RESISTANT 4		 0.58 0.31 -0.33
46 AT1G24210 Paired amphipathic helix (PAH2) superfamily protein -0.58 0.32 -0.31
47 AT4G31880 LOCATED IN: cytosol, chloroplast; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: Tudor/PWWP/MBT
superfamily protein (TAIR:AT1G15940.1); Has 137162 Blast
hits to 70781 proteins in 2973 species: Archae - 289;
Bacteria - 24182; Metazoa - 56725; Fungi - 20130; Plants -
6559; Viruses - 758; Other Eukaryotes - 28519 (source: NCBI
BLink).		 0.58 0.31 -0.31
48 AT2G41250 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.57 0.33 -0.32
49 AT1G33680 KH domain-containing protein 0.57 0.31 -0.33
50 AT1G71800 cleavage stimulating factor 64 cleavage stimulating factor 64 0.57 0.32 -0.32
51 AT5G46620 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G17960.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.57 0.31 -0.33
52 AT3G06160 AP2/B3-like transcriptional factor family protein -0.57 0.31 -0.31
53 AT3G17750 Protein kinase superfamily protein 0.57 0.32 -0.31
54 AT2G20190 CLIP-associated protein CLIP-ASSOCIATED PROTEIN,
CLIP-associated protein		 0.57 0.33 -0.32
55 AT1G66770 Nodulin MtN3 family protein AtSWEET6, SWEET6 0.56 0.31 -0.32
56 AT4G23730 Galactose mutarotase-like superfamily protein -0.56 0.31 -0.33
57 AT5G20700 Protein of unknown function (DUF581) -0.56 0.3 -0.31
58 AT1G32090 early-responsive to dehydration stress protein (ERD4) 0.56 0.31 -0.32
59 AT1G18950 DDT domain superfamily 0.56 0.32 -0.31
60 AT1G09730 Cysteine proteinases superfamily protein 0.56 0.31 -0.32
61 AT2G45040 Matrixin family protein -0.56 0.32 -0.31
62 AT2G01090 Ubiquinol-cytochrome C reductase hinge protein -0.56 0.31 -0.31
63 AT2G39705 ROTUNDIFOLIA like 8 DEVIL 11, ROTUNDIFOLIA like 8 0.56 0.33 -0.32
64 AT2G14170 aldehyde dehydrogenase 6B2 aldehyde dehydrogenase 6B2 -0.56 0.32 -0.3
65 AT1G63930 from the Czech 'roh' meaning 'corner' from the Czech 'roh' meaning
'corner'		 0.55 0.3 -0.33
66 AT3G30710 transposable element gene -0.55 0.32 -0.29
67 AT5G04290 kow domain-containing transcription factor 1 kow domain-containing
transcription factor 1, SPT5-LIKE		 0.54 0.32 -0.29
68 AT3G01780 ARM repeat superfamily protein TPLATE 0.54 0.32 -0.31
69 AT5G05150 autophagy-related gene 18E ARABIDOPSIS THALIANA HOMOLOG OF
YEAST AUTOPHAGY 18E,
autophagy-related gene 18E,
autophagy-related gene 18E		 0.54 0.32 -0.31
70 AT5G11910 alpha/beta-Hydrolases superfamily protein -0.53 0.28 -0.34
71 AT4G02075 RING/FYVE/PHD zinc finger superfamily protein pitchoun 1 -0.53 0.3 -0.3
72 AT1G16560 Per1-like family protein -0.53 0.32 -0.33
73 AT5G18710 Domain of unknown function (DUF3444) -0.52 0.3 -0.33
74 AT4G39180 Sec14p-like phosphatidylinositol transfer family protein ARABIDOPSIS THALIANA SECRETION 14,
SECRETION 14		 -0.52 0.32 -0.31
75 AT2G13680 callose synthase 5 ARABIDOPSIS THALIANA GLUCAN
SYNTHASE-LIKE 2, callose synthase
5, GLUCAN SYNTHASE-LIKE 2		 -0.51 0.3 -0.34
76 AT2G20380 Galactose oxidase/kelch repeat superfamily protein -0.51 0.31 -0.32
77 AT5G15480 C2H2-type zinc finger family protein -0.51 0.31 -0.3
78 AT4G12330 cytochrome P450, family 706, subfamily A, polypeptide 7 cytochrome P450, family 706,
subfamily A, polypeptide 7		 -0.51 0.33 -0.3
79 AT1G34400 unknown protein; Has 5 Blast hits to 5 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.5 0.3 -0.32
80 AT5G55640 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.5 0.33 -0.31
81 AT2G35570 pseudogene, serpin (serine protease inhibitor) family,
similar to phloem serpin-1 (Cucurbita maxima) GI:9937311;
blastp match of 49% identity and 9.9e-85 P-value to
GP|26224736|gb|AAN76362.1||AY158152 serpin-like protein
{Citrus x paradisi}		 -0.5 0.32 -0.3
82 AT3G14820 GDSL-like Lipase/Acylhydrolase superfamily protein -0.5 0.32 -0.32
83 AT2G13430 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.5 0.31 -0.3
84 AT5G39785 Protein of unknown function (DUF1666) -0.5 0.35 -0.32
85 AT4G09390 transposable element gene -0.49 0.27 -0.33