AT4G35020 : RAC-like 3
Query Information
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AGICode AT4G35020
Description RAC-like 3
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G35020 RAC-like 3 RAC-like 3, ATROP6, RAC-like 3,
RHO1PS, RHO-RELATED PROTEIN FROM
PLANTS 6		 1 0.31 -0.31
2 AT4G32340 Tetratricopeptide repeat (TPR)-like superfamily protein 0.83 0.3 -0.29
3 AT4G15930 Dynein light chain type 1 family protein 0.81 0.31 -0.31
4 AT5G57410 Afadin/alpha-actinin-binding protein 0.81 0.32 -0.31
5 AT3G23790 AMP-dependent synthetase and ligase family protein acyl activating enzyme 16 -0.81 0.32 -0.31
6 AT1G07880 Protein kinase superfamily protein ATMPK13 0.8 0.32 -0.34
7 AT5G16870 Peptidyl-tRNA hydrolase II (PTH2) family protein 0.79 0.32 -0.32
8 AT3G21690 MATE efflux family protein -0.79 0.31 -0.32
9 AT2G41710 Integrase-type DNA-binding superfamily protein 0.79 0.29 -0.31
10 AT5G57440 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 GLYCEROL-3-PHOSPHATASE 2, GS1 0.79 0.32 -0.33
11 AT5G21105 Plant L-ascorbate oxidase -0.78 0.31 -0.3
12 AT2G42120 DNA polymerase delta small subunit DNA polymerase delta small subunit 0.78 0.32 -0.33
13 AT5G65750 2-oxoglutarate dehydrogenase, E1 component -0.78 0.31 -0.32
14 AT1G63010 Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1)
domain-containing protein		 -0.78 0.3 -0.33
15 AT3G47730 ATP-binding cassette A2 ATP-binding cassette A2, A.
THALIANA ABC2 HOMOLOG 1, ABC2
homolog 1		 -0.77 0.32 -0.31
16 AT4G39080 vacuolar proton ATPase A3 vacuolar proton ATPase A3 -0.77 0.3 -0.32
17 AT4G15140 unknown protein; Has 26 Blast hits to 26 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.77 0.32 -0.32
18 AT5G01750 Protein of unknown function (DUF567) 0.77 0.31 -0.29
19 AT1G16520 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G56080.1); Has 243 Blast
hits to 234 proteins in 69 species: Archae - 2; Bacteria -
2; Metazoa - 61; Fungi - 9; Plants - 125; Viruses - 0;
Other Eukaryotes - 44 (source: NCBI BLink).		 0.77 0.32 -0.32
20 AT2G38250 Homeodomain-like superfamily protein -0.77 0.32 -0.33
21 AT3G05360 receptor like protein 30 receptor like protein 30, receptor
like protein 30		 -0.77 0.3 -0.3
22 AT2G05710 aconitase 3 aconitase 3 -0.77 0.32 -0.3
23 AT1G24460 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G31570.1); Has 181008 Blast hits to 85359 proteins
in 3551 species: Archae - 3290; Bacteria - 48304; Metazoa -
70793; Fungi - 13943; Plants - 10118; Viruses - 785; Other
Eukaryotes - 33775 (source: NCBI BLink).		 TGN-localized SYP41 interacting
protein		 -0.77 0.31 -0.32
24 AT3G49210 O-acyltransferase (WSD1-like) family protein -0.76 0.3 -0.32
25 AT5G23550 Got1/Sft2-like vescicle transport protein family 0.76 0.31 -0.3
26 AT5G43130 TBP-associated factor 4 TBP-associated factor 4,
TBP-associated factor 4B		 -0.76 0.31 -0.31
27 AT1G20980 squamosa promoter binding protein-like 14 SQUAMOSA PROMOTER BINDING
PROTEIN-LIKE 14, FBR6, squamosa
promoter binding protein-like 14,
SPL1R2		 -0.76 0.29 -0.32
28 AT2G31060 elongation factor family protein EMBRYO DEFECTIVE 2785 -0.76 0.3 -0.32
29 AT5G58270 ABC transporter of the mitochondrion 3 ATP-binding cassette B25,
ARABIDOPSIS THALIANA ABC
TRANSPORTER OF THE MITOCHONDRION
3, ABC transporter of the
mitochondrion 3, STARIK 1		 -0.75 0.31 -0.31
30 AT3G15980 Coatomer, beta' subunit -0.75 0.31 -0.3
31 AT2G32980 unknown protein; Has 158 Blast hits to 154 proteins in 73
species: Archae - 0; Bacteria - 61; Metazoa - 0; Fungi - 0;
Plants - 55; Viruses - 28; Other Eukaryotes - 14 (source:
NCBI BLink).		 0.75 0.34 -0.31
32 AT3G11650 NDR1/HIN1-like 2 NDR1/HIN1-like 2 0.75 0.3 -0.3
33 AT4G24120 YELLOW STRIPE like 1 YELLOW STRIPE LIKE 1, YELLOW
STRIPE like 1		 -0.75 0.31 -0.33
34 AT3G08590 Phosphoglycerate mutase,
2,3-bisphosphoglycerate-independent		 2,3-biphosphoglycerate-independent
phosphoglycerate mutase 2		 -0.75 0.29 -0.31
35 AT1G10170 NF-X-like 1 NF-X-like 1, NF-X-like 1 -0.75 0.31 -0.33
36 AT3G13330 proteasome activating protein 200 proteasome activating protein 200 -0.75 0.33 -0.29
37 AT4G10040 cytochrome c-2 cytochrome c-2 -0.75 0.33 -0.31
38 AT4G11160 Translation initiation factor 2, small GTP-binding protein -0.74 0.3 -0.31
39 AT5G67080 mitogen-activated protein kinase kinase kinase 19 mitogen-activated protein kinase
kinase kinase 19		 -0.74 0.32 -0.33
40 AT4G11380 Adaptin family protein -0.74 0.31 -0.3
41 AT4G00755 F-box family protein 0.74 0.31 -0.3
42 AT1G66370 myb domain protein 113 myb domain protein 113, myb domain
protein 113		 -0.74 0.32 -0.31
43 AT4G30330 Small nuclear ribonucleoprotein family protein 0.74 0.33 -0.32
44 AT1G08560 syntaxin of plants 111 ATSYP111, KNOLLE, syntaxin of
plants 111		 0.74 0.31 -0.33
45 AT5G20030 Plant Tudor-like RNA-binding protein 0.74 0.32 -0.31
46 AT4G23010 UDP-galactose transporter 2 ATUTR2, UDP-galactose transporter
2		 -0.74 0.31 -0.29
47 AT1G07510 FTSH protease 10 FTSH protease 10 -0.73 0.32 -0.31
48 AT4G28950 RHO-related protein from plants 9 Arabidopsis RAC-like 7, ATRAC7,
ATROP9, RAC7, RHO-related protein
from plants 9		 0.73 0.31 -0.31
49 AT5G25090 early nodulin-like protein 13 AtENODL13, early nodulin-like
protein 13		 0.73 0.32 -0.3
50 AT1G08620 Transcription factor jumonji (jmj) family protein / zinc
finger (C5HC2 type) family protein		 PKDM7D -0.73 0.3 -0.31
51 AT3G10370 FAD-dependent oxidoreductase family protein SUGAR-DEPENDENT 6 -0.73 0.31 -0.34
52 AT3G01040 galacturonosyltransferase 13 galacturonosyltransferase 13 -0.73 0.32 -0.34
53 AT3G02260 auxin transport protein (BIG) ATTENUATED SHADE AVOIDANCE 1, BIG,
CORYMBOSA1, DARK OVER-EXPRESSION
OF CAB 1, LOW PHOSPHATE-RESISTANT
ROOT 1, TRANSPORT INHIBITOR
RESPONSE 3, UMBRELLA 1		 -0.73 0.33 -0.31
54 AT3G18860 transducin family protein / WD-40 repeat family protein -0.73 0.33 -0.31
55 AT3G16330 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G52140.1); Has 109 Blast hits
to 109 proteins in 16 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 109; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.73 0.3 -0.33
56 AT5G62550 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 9 growth stages; Has 14949 Blast hits to 9947
proteins in 971 species: Archae - 43; Bacteria - 3248;
Metazoa - 4424; Fungi - 1542; Plants - 562; Viruses - 55;
Other Eukaryotes - 5075 (source: NCBI BLink).		 0.73 0.31 -0.31
57 AT1G69400 Transducin/WD40 repeat-like superfamily protein 0.73 0.3 -0.32
58 AT5G15400 U-box domain-containing protein -0.73 0.31 -0.33
59 AT3G02740 Eukaryotic aspartyl protease family protein -0.73 0.3 -0.3
60 AT3G05910 Pectinacetylesterase family protein -0.73 0.31 -0.32
61 AT3G16270 ENTH/VHS family protein -0.72 0.31 -0.29
62 AT4G39630 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.72 0.34 -0.34
63 AT5G24860 flowering promoting factor 1 ARABIDOPSIS FLOWERING PROMOTING
FACTOR 1, FLOWERING PROMOTING
FACTOR 1		 -0.72 0.35 -0.3
64 AT5G09590 mitochondrial HSO70 2 HEAT SHOCK COGNATE, mitochondrial
HSO70 2		 -0.72 0.3 -0.32
65 AT1G06960 RNA-binding (RRM/RBD/RNP motifs) family protein 0.72 0.32 -0.32
66 AT2G38160 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G40070.2); Has 972 Blast hits
to 731 proteins in 211 species: Archae - 0; Bacteria - 236;
Metazoa - 194; Fungi - 201; Plants - 218; Viruses - 32;
Other Eukaryotes - 91 (source: NCBI BLink).		 0.72 0.3 -0.32
67 AT5G56350 Pyruvate kinase family protein -0.72 0.28 -0.31
68 AT3G57040 response regulator 9 response regulator 9, RESPONSE
REGULATOR 4		 0.72 0.33 -0.32
69 AT4G16800 ATP-dependent caseinolytic (Clp) protease/crotonase family
protein		 0.72 0.32 -0.32
70 AT5G33290 xylogalacturonan deficient 1 xylogalacturonan deficient 1 -0.72 0.32 -0.28
71 AT5G55070 Dihydrolipoamide succinyltransferase -0.72 0.33 -0.29
72 AT2G11520 calmodulin-binding receptor-like cytoplasmic kinase 3 calmodulin-binding receptor-like
cytoplasmic kinase 3		 -0.72 0.31 -0.31
73 AT1G04780 Ankyrin repeat family protein -0.72 0.34 -0.33
74 AT1G32530 RING/U-box superfamily protein -0.72 0.28 -0.33
75 AT5G63905 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 20 plant
structures; EXPRESSED DURING: 12 growth stages; Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.72 0.33 -0.31
76 AT5G47710 Calcium-dependent lipid-binding (CaLB domain) family
protein		 0.71 0.32 -0.32
77 AT2G17790 VPS35 homolog A VPS35 homolog A, ZIG suppressor 3 -0.71 0.31 -0.29
78 AT2G20010 Protein of unknown function (DUF810) -0.71 0.29 -0.3
79 AT1G60010 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G10530.1); Has 185 Blast hits to 185 proteins in
18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
3; Plants - 180; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.71 0.31 -0.33
80 AT4G14220 RING-H2 group F1A RING-H2 group F1A -0.71 0.32 -0.32
81 AT4G16660 heat shock protein 70 (Hsp 70) family protein -0.71 0.29 -0.33
82 AT1G61800 glucose-6-phosphate/phosphate translocator 2 ARABIDOPSIS
GLUCOSE-6-PHOSPHATE/PHOSPHATE
TRANSLOCATOR 2,
glucose-6-phosphate/phosphate
translocator 2		 -0.71 0.32 -0.33
83 AT4G26970 aconitase 2 aconitase 2 -0.71 0.3 -0.29
84 AT5G09470 dicarboxylate carrier 3 dicarboxylate carrier 3 -0.71 0.33 -0.3
85 AT2G22010 related to KPC1 related to KPC1 -0.71 0.32 -0.31
86 AT1G53790 F-box and associated interaction domains-containing protein -0.71 0.3 -0.31
87 AT5G13840 FIZZY-related 3 FIZZY-related 3 0.71 0.32 -0.33
88 AT5G26860 lon protease 1 lon protease 1, LON_ARA_ARA -0.71 0.29 -0.31
89 AT3G14270 phosphatidylinositol-4-phosphate 5-kinase family protein FORMS APLOID AND BINUCLEATE CELLS
1B		 -0.71 0.31 -0.33
90 AT2G33810 squamosa promoter binding protein-like 3 squamosa promoter binding
protein-like 3		 0.71 0.31 -0.31
91 AT4G34500 Protein kinase superfamily protein 0.7 0.31 -0.3
92 AT2G43000 NAC domain containing protein 42 NAC domain containing protein 42,
NAC domain containing protein 42		 -0.7 0.33 -0.32
93 AT5G08580 Calcium-binding EF hand family protein 0.7 0.3 -0.31
94 AT5G18950 Tetratricopeptide repeat (TPR)-like superfamily protein -0.7 0.32 -0.31
95 AT1G11380 PLAC8 family protein 0.7 0.31 -0.3
96 AT5G23630 phosphate deficiency response 2 MALE GAMETOGENESIS IMPAIRED
ANTHERS, phosphate deficiency
response 2, PI DEFICIENCY RESPONSE
2		 -0.7 0.32 -0.31
97 AT5G43870 Plant protein of unknown function (DUF828) with plant
pleckstrin homology-like region		 0.7 0.31 -0.34
98 AT5G67270 end binding protein 1C MICROTUBULE END BINDING PROTEIN 1,
ATEB1-HOMOLOG1, end binding
protein 1C		 0.7 0.31 -0.3
99 AT1G15130 Endosomal targeting BRO1-like domain-containing protein -0.7 0.33 -0.31
100 AT1G07160 Protein phosphatase 2C family protein -0.7 0.34 -0.33
101 AT3G63150 MIRO-related GTP-ase 2 CALCIUM BINDING GTP-ASE,
MIRO-related GTP-ase 2		 -0.7 0.31 -0.3
102 AT5G13490 ADP/ATP carrier 2 ADP/ATP carrier 2 -0.7 0.3 -0.31
103 AT1G56220 Dormancy/auxin associated family protein 0.7 0.34 -0.36
104 AT5G03050 unknown protein; Has 33 Blast hits to 33 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.7 0.32 -0.3
105 AT5G43700 AUX/IAA transcriptional regulator family protein AUXIN INDUCIBLE 2-11,
indole-3-acetic acid inducible 4		 0.69 0.31 -0.31
106 AT5G44560 SNF7 family protein VPS2.2 0.69 0.33 -0.31
107 AT3G25980 DNA-binding HORMA family protein MITOTIC ARREST-DEFICIENT 2 0.69 0.3 -0.34
108 AT5G04930 aminophospholipid ATPase 1 aminophospholipid ATPase 1 -0.69 0.32 -0.33
109 AT4G23460 Adaptin family protein -0.69 0.31 -0.34
110 AT2G40090 ABC2 homolog 9 ABC2 homolog 9, ABC2 homolog 9 -0.69 0.31 -0.29
111 AT1G74250 DNAJ heat shock N-terminal domain-containing protein -0.69 0.3 -0.3
112 AT1G23230 CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med23
(InterPro:IPR021629); Has 187 Blast hits to 184 proteins in
67 species: Archae - 0; Bacteria - 0; Metazoa - 135; Fungi
- 0; Plants - 43; Viruses - 0; Other Eukaryotes - 9
(source: NCBI BLink).		 -0.69 0.33 -0.33
113 AT5G65720 nitrogen fixation S (NIFS)-like 1 ARABIDOPSIS THALIANA NITROGEN
FIXATION S (NIFS)-LIKE 1, NITROGEN
FIXATION S HOMOLOG 1, nitrogen
fixation S (NIFS)-like 1, NITROGEN
FIXATION S HOMOLOG 1		 -0.69 0.31 -0.34
114 AT4G39850 peroxisomal ABC transporter 1 ATP-binding cassette D1, acetate
non-utilizing 2, Arabidopsis
thaliana ATP-binding cassette D1,
COMATOSE, PEROXISOME DEFECTIVE 3,
peroxisomal ABC transporter 1		 -0.69 0.31 -0.32
115 AT5G03610 GDSL-like Lipase/Acylhydrolase superfamily protein -0.69 0.32 -0.31
116 AT4G19865 Galactose oxidase/kelch repeat superfamily protein 0.69 0.31 -0.3
117 AT5G15510 TPX2 (targeting protein for Xklp2) protein family 0.69 0.33 -0.31
118 AT5G27740 ATPase family associated with various cellular activities
(AAA) 		EMBRYO DEFECTIVE 161, EMBRYO
DEFECTIVE 251, EMBRYO DEFECTIVE
2775, replication factor C 3		 0.69 0.33 -0.28
119 AT1G61140 SNF2 domain-containing protein / helicase domain-containing
protein / zinc finger protein-related		 embryo sac development arrest 16 -0.69 0.34 -0.32
120 AT2G39020 Acyl-CoA N-acyltransferases (NAT) superfamily protein -0.69 0.31 -0.3
121 AT3G10380 subunit of exocyst complex 8 SUBUNIT OF EXOCYST COMPLEX 8,
subunit of exocyst complex 8		 -0.69 0.31 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
122 C0067 Citramalic acid (S)-(+)-, (R)-(-)-Citramalate (S)-Citramalate; (R)-Citramalate - -0.82 0.43 -0.44 C0067
123 C0228 Ribose-5-phosphate D-Ribose-5-phosphate D-Ribose-5-phosphate PRPP biosynthesis I,
Calvin-Benson-Bassham cycle,
trans-zeatin biosynthesis,
pentose phosphate pathway (non-oxidative branch),
pyridine nucleotide cycling (plants),
Rubisco shunt,
ribose degradation,
pyridoxal 5'-phosphate biosynthesis II 		0.76 0.41 -0.45 C0228
124 C0074 Cystine L-Cystine L-Cystine protein precursor -0.75 0.44 -0.42 C0074
125 C0144 Maltose D-Maltose α-Maltose starch degradation II -0.7 0.45 -0.45 C0144