AT4G34700 : AtCIB22
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT4G34700
Description LYR family of Fe/S cluster biogenesis protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G34700 LYR family of Fe/S cluster biogenesis protein AtCIB22, B22 subunit of eukaryotic
mitochondrial Complex I		 1 0.32 -0.32
2 AT1G14450 NADH dehydrogenase (ubiquinone)s 0.89 0.31 -0.33
3 AT4G37830 cytochrome c oxidase-related 0.87 0.32 -0.32
4 AT4G20150 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, plasma membrane, mitochondrial respiratory
chain complex I, respiratory chain complex I; EXPRESSED IN:
24 plant structures; EXPRESSED DURING: 15 growth stages;
Has 30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996
(source: NCBI BLink).		 0.86 0.31 -0.31
5 AT3G10920 manganese superoxide dismutase 1 ARABIDOPSIS MANGANESE SUPEROXIDE
DISMUTASE 1, MATERNAL EFFECT
EMBRYO ARREST 33, manganese
superoxide dismutase 1		 0.86 0.32 -0.32
6 AT5G08060 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 16 growth stages; Has 42 Blast hits to 42 proteins
in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 41; Viruses - 0; Other Eukaryotes - 1
(source: NCBI BLink).		 0.86 0.32 -0.31
7 AT4G02620 vacuolar ATPase subunit F family protein 0.84 0.31 -0.31
8 AT5G52840 NADH-ubiquinone oxidoreductase-related 0.84 0.32 -0.3
9 AT2G21870 copper ion binding;cobalt ion binding;zinc ion binding MALE GAMETOPHYTE DEFECTIVE 1 0.84 0.33 -0.29
10 AT2G33040 gamma subunit of Mt ATP synthase gamma subunit of Mt ATP synthase 0.83 0.31 -0.32
11 AT3G10860 Cytochrome b-c1 complex, subunit 8 protein 0.83 0.32 -0.33
12 AT3G07480 2Fe-2S ferredoxin-like superfamily protein 0.83 0.32 -0.32
13 AT3G02780 isopentenyl pyrophosphate:dimethylallyl pyrophosphate
isomerase 2		 ATISOPENTENYL DIPHOSPHE ISOMERASE
2, IPIAT1, isopentenyl
pyrophosphate:dimethylallyl
pyrophosphate isomerase 2		 0.83 0.33 -0.31
14 AT3G52730 ubiquinol-cytochrome C reductase UQCRX/QCR9-like family
protein		 0.83 0.32 -0.3
15 AT5G66510 gamma carbonic anhydrase 3 gamma carbonic anhydrase 3 0.82 0.32 -0.31
16 AT5G13450 delta subunit of Mt ATP synthase delta subunit of Mt ATP synthase 0.82 0.3 -0.3
17 AT1G72020 unknown protein; Has 52 Blast hits to 52 proteins in 18
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 52; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.82 0.33 -0.3
18 AT4G22220 SufE/NifU family protein ATISU1, ISU1 0.82 0.32 -0.32
19 AT4G32470 Cytochrome bd ubiquinol oxidase, 14kDa subunit 0.82 0.33 -0.31
20 AT5G20080 FAD/NAD(P)-binding oxidoreductase 0.8 0.32 -0.31
21 AT2G25610 ATPase, F0/V0 complex, subunit C protein 0.8 0.31 -0.32
22 AT2G46540 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, membrane; EXPRESSED IN: 25 plant structures;
EXPRESSED DURING: 16 growth stages; Has 42 Blast hits to 42
proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.8 0.32 -0.32
23 AT3G03070 NADH-ubiquinone oxidoreductase-related 0.8 0.31 -0.33
24 AT5G08530 51 kDa subunit of complex I 51 kDa subunit of complex I 0.8 0.33 -0.32
25 AT3G13410 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endoplasmic reticulum; EXPRESSED IN: 25 plant structures;
EXPRESSED DURING: 15 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G55546.1); Has 49 Blast hits to 49 proteins in 14
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 48; Viruses - 0; Other Eukaryotes - 1 (source:
NCBI BLink).		 0.79 0.32 -0.32
26 AT4G31990 aspartate aminotransferase 5 ASPARTATE AMINOTRANSFERASE
DEFICIENT 3, aspartate
aminotransferase 5, ATAAT1		 0.79 0.33 -0.31
27 AT5G64350 FK506-binding protein 12 ARABIDOPSIS THALIANA FK506-BINDING
PROTEIN 12, FK506-binding protein
12, FKP12		 0.79 0.3 -0.32
28 AT2G22425 Microsomal signal peptidase 12 kDa subunit (SPC12) 0.79 0.34 -0.32
29 AT2G20420 ATP citrate lyase (ACL) family protein 0.79 0.29 -0.32
30 AT3G52560 ubiquitin E2 variant 1D-4 MMS2 ZWEI HOMOLOGUE 4, UBIQUITIN
E2 VARIANT 1D, ubiquitin E2
variant 1D-4		 0.79 0.32 -0.3
31 AT1G67350 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.79 0.33 -0.32
32 AT5G20090 Uncharacterised protein family (UPF0041) 0.79 0.31 -0.31
33 AT5G50960 nucleotide binding protein 35 NUCLEOTIDE BINDING PROTEIN 35,
nucleotide binding protein 35		 0.79 0.32 -0.31
34 AT1G47260 gamma carbonic anhydrase 2 APFI, gamma carbonic anhydrase 2 0.78 0.3 -0.3
35 AT3G43520 Transmembrane proteins 14C 0.78 0.31 -0.32
36 AT3G12290 Amino acid dehydrogenase family protein 0.78 0.32 -0.33
37 AT2G16510 ATPase, F0/V0 complex, subunit C protein 0.78 0.3 -0.33
38 AT5G47030 ATPase, F1 complex, delta/epsilon subunit 0.78 0.32 -0.34
39 AT3G12260 LYR family of Fe/S cluster biogenesis protein 0.78 0.32 -0.31
40 AT1G06200 Peptidase S24/S26A/S26B/S26C family protein 0.77 0.31 -0.3
41 AT2G02050 NADH-ubiquinone oxidoreductase B18 subunit, putative 0.77 0.3 -0.32
42 AT1G66670 CLP protease proteolytic subunit 3 CLP protease proteolytic subunit
3, NCLPP3		 0.77 0.31 -0.33
43 AT1G08770 prenylated RAB acceptor 1.E prenylated RAB acceptor 1.E 0.77 0.31 -0.31
44 AT4G38920 vacuolar-type H(+)-ATPase C3 vacuolar-type H(+)-ATPase C3,
AVA-P3, vacuolar-type H(+)-ATPase
C3		 0.77 0.29 -0.31
45 AT3G53340 nuclear factor Y, subunit B10 nuclear factor Y, subunit B10 0.77 0.31 -0.3
46 AT5G17280 CONTAINS InterPro DOMAIN/s: Oxidoreductase-like, N-terminal
(InterPro:IPR019180); Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes -
339 (source: NCBI BLink).		 0.77 0.31 -0.31
47 AT2G33220 GRIM-19 protein 0.77 0.31 -0.33
48 AT5G50870 ubiquitin-conjugating enzyme 27 ubiquitin-conjugating enzyme 27 0.77 0.34 -0.31
49 AT3G62790 NADH-ubiquinone oxidoreductase-related 0.76 0.32 -0.33
50 AT2G20360 NAD(P)-binding Rossmann-fold superfamily protein 0.76 0.3 -0.32
51 AT2G02510 NADH dehydrogenase (ubiquinone)s 0.76 0.33 -0.29
52 AT1G08480 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, plasma membrane, plastid, vacuole; EXPRESSED
IN: 27 plant structures; EXPRESSED DURING: 15 growth
stages; Has 39 Blast hits to 39 proteins in 13 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		 succinate dehydrogenase 6 0.76 0.32 -0.31
53 AT4G26410 Uncharacterised conserved protein UCP022280 0.76 0.29 -0.32
54 AT2G43090 Aconitase/3-isopropylmalate dehydratase protein 0.76 0.3 -0.31
55 AT2G18040 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 peptidylprolyl cis/trans
isomerase, NIMA-interacting 1		 0.76 0.32 -0.3
56 AT4G12230 alpha/beta-Hydrolases superfamily protein 0.76 0.33 -0.32
57 AT2G20820 unknown protein; Has 44 Blast hits to 44 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.76 0.33 -0.32
58 AT4G11150 vacuolar ATP synthase subunit E1 embryo defective 2448, vacuolar
ATP synthase subunit E1, TUFF,
VHA-E1		 0.76 0.31 -0.3
59 AT3G22950 ADP-ribosylation factor C1 ADP-ribosylation factor C1,
ADP-ribosylation factor C1		 0.75 0.32 -0.31
60 AT1G27450 adenine phosphoribosyl transferase 1 adenine phosphoribosyl transferase
1, ARABIDOPSIS THALIANA ADENINE
PHOSPHORIBOSYLTRANSFERASE 1		 0.75 0.31 -0.32
61 AT4G26710 ATPase, V0 complex, subunit E 0.75 0.31 -0.32
62 AT3G01390 vacuolar membrane ATPase 10 AVMA10, vacuolar membrane ATPase
10		 0.75 0.31 -0.33
63 AT1G22300 general regulatory factor 10 14-3-3 PROTEIN G-BOX FACTOR14
EPSILON, GF14 EPSILON, general
regulatory factor 10		 0.75 0.32 -0.31
64 AT5G61220 LYR family of Fe/S cluster biogenesis protein 0.75 0.33 -0.32
65 AT1G15120 Ubiquinol-cytochrome C reductase hinge protein 0.75 0.3 -0.31
66 AT3G52300 ATP synthase D chain, mitochondrial ATP synthase D chain,
mitochondrial		 0.75 0.31 -0.3
67 AT3G13200 Cwf15 / Cwc15 cell cycle control family protein EMBRYO DEFECTIVE 2769 0.74 0.3 -0.31
68 AT1G79230 mercaptopyruvate sulfurtransferase 1 ATMST1, ARABIDOPSIS THALIANA
RHODANESE HOMOLOGUE 1,
mercaptopyruvate sulfurtransferase
1, SULFURTRANSFERASE 1, STR1		 0.74 0.32 -0.32
69 AT4G02580 NADH-ubiquinone oxidoreductase 24 kDa subunit, putative 0.74 0.32 -0.31
70 AT3G22530 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 25 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G14830.1); Has 77 Blast
hits to 77 proteins in 12 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 77; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.74 0.3 -0.31
71 AT3G42050 vacuolar ATP synthase subunit H family protein 0.74 0.31 -0.31
72 AT5G47890 NADH-ubiquinone oxidoreductase B8 subunit, putative 0.74 0.31 -0.3
73 AT5G17560 BolA-like family protein 0.73 0.31 -0.33
74 AT2G31570 glutathione peroxidase 2 glutathione peroxidase 2,
glutathione peroxidase 2		 0.73 0.3 -0.3
75 AT5G42980 thioredoxin 3 thioredoxin H-type 3, thioredoxin
3, ATTRXH3, thioredoxin 3,
THIOREDOXIN H3		 0.73 0.29 -0.34
76 AT3G28480 Oxoglutarate/iron-dependent oxygenase 0.73 0.34 -0.32
77 AT4G30010 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, plastid; EXPRESSED IN: 26 plant structures;
EXPRESSED DURING: 15 growth stages; Has 39 Blast hits to 39
proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.73 0.31 -0.32
78 AT5G63000 Mitochondrial import inner membrane translocase subunit
Tim17/Tim22/Tim23 family protein		 0.73 0.34 -0.32
79 AT3G08610 unknown protein; Has 40 Blast hits to 40 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.73 0.3 -0.31
80 AT4G29480 Mitochondrial ATP synthase subunit G protein 0.72 0.34 -0.34
81 AT4G00585 unknown protein; Has 47 Blast hits to 47 proteins in 22
species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 7;
Plants - 33; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 0.72 0.32 -0.31
82 AT5G22360 vesicle-associated membrane protein 714 vesicle-associated membrane
protein 714, VAMP714,
vesicle-associated membrane
protein 714		 0.72 0.34 -0.32
83 AT1G79550 phosphoglycerate kinase phosphoglycerate kinase 0.72 0.33 -0.3
84 AT1G80600 HOPW1-1-interacting 1 HOPW1-1-interacting 1 0.72 0.31 -0.31
85 AT2G30330 GCN5L1 family protein BLOC subunit 1 0.72 0.29 -0.3
86 AT3G57870 sumo conjugation enzyme 1 AHUS5, SUMO CONJUGATION ENZYME 1,
EMBRYO DEFECTIVE 1637, sumo
conjugation enzyme 1, SUMO
CONJUGATING ENZYME 1A		 0.72 0.32 -0.29
87 AT5G57330 Galactose mutarotase-like superfamily protein 0.72 0.32 -0.32
88 AT3G51480 glutamate receptor 3.6 glutamate receptor 3.6, GLR3.6,
glutamate receptor 3.6		 -0.72 0.31 -0.31
89 AT3G20920 translocation protein-related 0.71 0.33 -0.31
90 AT4G34050 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 caffeoyl coenzyme A
O-methyltransferase 1		 0.71 0.33 -0.31
91 AT2G17380 associated protein 19 associated protein 19 0.71 0.31 -0.32
92 AT5G47570 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.71 0.31 -0.31
93 AT2G33470 glycolipid transfer protein 1 ARABIDOPSIS GLYCOLIPID TRANSFER
PROTEIN 1, glycolipid transfer
protein 1		 0.71 0.31 -0.32
94 AT1G80500 SNARE-like superfamily protein 0.71 0.34 -0.31
95 AT3G46430 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, mitochondrial respiratory chain complex III;
EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15
growth stages; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT5G59613.2); Has 51 Blast hits to 51
proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.71 0.3 -0.33
96 AT3G06050 peroxiredoxin IIF PEROXIREDOXIN IIF, peroxiredoxin
IIF		 0.71 0.31 -0.33
97 AT2G42210 Mitochondrial import inner membrane translocase subunit
Tim17/Tim22/Tim23 family protein		 ATOEP16-3, OEP16-3 0.71 0.33 -0.31
98 AT5G10450 G-box regulating factor 6 14-3-3 PROTEIN G-BOX FACTOR14
LAMBDA, AFT1, G-box regulating
factor 6		 0.71 0.33 -0.28
99 AT4G27180 kinesin 2 kinesin 2, KINESIN-LIKE PROTEIN IN
ARABIDOPSIS THALIANA B		 -0.69 0.33 -0.31
100 AT3G22790 Kinase interacting (KIP1-like) family protein -0.68 0.33 -0.3
101 AT5G54280 myosin 2 myosin 2, ARABIDOPSIS THALIANA
MYOSIN 4, ARABIDOPSIS THALIANA
MYOSIN 1		 -0.67 0.3 -0.29
102 AT4G14970 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED
DURING: 6 growth stages; Has 257 Blast hits to 164 proteins
in 70 species: Archae - 0; Bacteria - 4; Metazoa - 189;
Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 26
(source: NCBI BLink).		 -0.67 0.32 -0.3
103 AT5G44030 cellulose synthase A4 cellulose synthase A4, IRREGULAR
XYLEM 5, NWS2		 -0.66 0.32 -0.31
104 AT1G26150 proline-rich extensin-like receptor kinase 10 proline-rich extensin-like
receptor kinase 10, proline-rich
extensin-like receptor kinase 10		 -0.65 0.3 -0.31
105 AT3G61690 nucleotidyltransferases -0.65 0.32 -0.32
106 AT1G73570 HCP-like superfamily protein -0.65 0.3 -0.31
107 AT3G58770 unknown protein; Has 38 Blast hits to 36 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2;
Plants - 32; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 -0.64 0.3 -0.31
108 AT3G03300 dicer-like 2 DICER-LIKE 2, dicer-like 2 -0.63 0.32 -0.29
109 AT2G35110 transcription activators GNARLED, NCK-ASSOCIATED PROTEIN 1,
NAPP		 -0.63 0.31 -0.33
110 AT4G21550 VP1/ABI3-like 3 VP1/ABI3-like 3 -0.62 0.32 -0.32
111 AT3G20150 Kinesin motor family protein -0.62 0.31 -0.33
112 AT3G33530 Transducin family protein / WD-40 repeat family protein -0.6 0.32 -0.32
113 AT2G42330 GC-rich sequence DNA-binding factor-like protein with
Tuftelin interacting domain		 -0.6 0.31 -0.31
114 AT1G33980 Smg-4/UPF3 family protein ATUPF3, UPF3 -0.6 0.34 -0.33
115 AT3G44630 Disease resistance protein (TIR-NBS-LRR class) family -0.58 0.31 -0.32
116 AT2G01130 DEA(D/H)-box RNA helicase family protein -0.58 0.32 -0.34
117 AT5G02690 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 11 plant structures;
EXPRESSED DURING: 9 growth stages; Has 2 Blast hits to 2
proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.58 0.32 -0.31
118 AT1G13050 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G26350.1); Has 538 Blast hits
to 510 proteins in 88 species: Archae - 0; Bacteria - 23;
Metazoa - 81; Fungi - 36; Plants - 361; Viruses - 8; Other
Eukaryotes - 29 (source: NCBI BLink).		 -0.58 0.32 -0.32
119 AT1G70620 cyclin-related -0.58 0.31 -0.33
120 AT3G15050 IQ-domain 10 IQ-domain 10 -0.57 0.33 -0.35
121 AT3G53320 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G37070.1); Has 11044 Blast
hits to 5993 proteins in 551 species: Archae - 8; Bacteria
- 1486; Metazoa - 4078; Fungi - 1814; Plants - 348; Viruses
- 112; Other Eukaryotes - 3198 (source: NCBI BLink).		 -0.56 0.34 -0.31
122 AT3G19040 histone acetyltransferase of the TAFII250 family 2 histone acetyltransferase of the
TAFII250 family 2, TBP-ASSOCIATED
FACTOR 1, TBP-ASSOCIATED FACTOR 1B		 -0.56 0.3 -0.35
123 AT5G22380 NAC domain containing protein 90 NAC domain containing protein 90,
NAC domain containing protein 90		 -0.56 0.31 -0.31