AT4G34290 : -
Query Information
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AGICode AT4G34290
Description SWIB/MDM2 domain superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G34290 SWIB/MDM2 domain superfamily protein 1 0.29 -0.33
2 AT4G26370 antitermination NusB domain-containing protein 0.95 0.31 -0.32
3 AT4G20130 plastid transcriptionally active 14 plastid transcriptionally active
14		 0.94 0.29 -0.31
4 AT2G33800 Ribosomal protein S5 family protein EMBRYO DEFECTIVE 3113 0.94 0.33 -0.31
5 AT2G40690 NAD-dependent glycerol-3-phosphate dehydrogenase family
protein		 GLY1, SUPPRESSOR OF FATTY ACID
DESATURASE DEFICIENCY 1		 0.93 0.33 -0.33
6 AT5G08280 hydroxymethylbilane synthase hydroxymethylbilane synthase 0.93 0.31 -0.31
7 AT2G14880 SWIB/MDM2 domain superfamily protein 0.93 0.3 -0.31
8 AT2G33430 differentiation and greening-like 1 DIFFERENTIATION AND GREENING-LIKE,
differentiation and greening-like
1		 0.92 0.32 -0.29
9 AT5G23310 Fe superoxide dismutase 3 Fe superoxide dismutase 3 0.92 0.31 -0.31
10 AT5G11480 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.92 0.31 -0.33
11 AT1G48350 Ribosomal L18p/L5e family protein EMBRYO DEFECTIVE 3105 0.92 0.3 -0.3
12 AT2G44640 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: mitochondrion,
chloroplast, plasma membrane, plastid, chloroplast
envelope; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF3769 (InterPro:IPR022244);
BEST Arabidopsis thaliana protein match is: pigment
defective 320 (TAIR:AT3G06960.1); Has 49 Blast hits to 48
proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes -
1 (source: NCBI BLink).		 0.92 0.29 -0.33
13 AT3G13120 Ribosomal protein S10p/S20e family protein 0.92 0.31 -0.32
14 AT4G37510 Ribonuclease III family protein 0.92 0.3 -0.33
15 AT4G20130 plastid transcriptionally active 14 plastid transcriptionally active
14		 0.92 0.29 -0.33
16 AT1G07320 ribosomal protein L4 EMBRYO DEFECTIVE 2784, ribosomal
protein L4		 0.91 0.31 -0.32
17 AT3G17170 Translation elongation factor EF1B/ribosomal protein S6
family protein		 REGULATOR OF FATTY-ACID
COMPOSITION 3		 0.91 0.3 -0.33
18 AT5G14660 peptide deformylase 1B ATDEF2, DEF2, peptide deformylase
1B		 0.91 0.31 -0.32
19 AT5G65220 Ribosomal L29 family protein 0.91 0.31 -0.32
20 AT2G24060 Translation initiation factor 3 protein 0.91 0.34 -0.35
21 AT3G49140 Pentatricopeptide repeat (PPR) superfamily protein 0.91 0.32 -0.32
22 AT2G03420 unknown protein; Has 38 Blast hits to 38 proteins in 17
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.91 0.32 -0.31
23 AT5G63050 embryo defective 2759 embryo defective 2759 0.91 0.3 -0.33
24 AT5G22640 MORN (Membrane Occupation and Recognition Nexus)
repeat-containing protein		 embryo defective 1211 0.91 0.33 -0.33
25 AT1G08540 RNApolymerase sigma subunit 2 ABC1, SIGMA FACTOR 1, SIGMA FACTOR
2, RNA POLYMERASE SIGMA SUBUNIT 1,
RNApolymerase sigma subunit 2,
SIGA, SIGMA FACTOR B		 0.91 0.32 -0.33
26 AT3G48730 glutamate-1-semialdehyde 2,1-aminomutase 2 glutamate-1-semialdehyde
2,1-aminomutase 2		 0.91 0.32 -0.32
27 AT3G05600 alpha/beta-Hydrolases superfamily protein 0.91 0.32 -0.32
28 AT1G06190 Rho termination factor 0.9 0.29 -0.33
29 AT2G40490 Uroporphyrinogen decarboxylase HEME2 0.9 0.31 -0.31
30 AT1G13270 methionine aminopeptidase 1B METHIONINE AMINOPEPTIDASE 1B,
methionine aminopeptidase 1B		 0.9 0.33 -0.3
31 AT3G54210 Ribosomal protein L17 family protein 0.9 0.31 -0.34
32 AT2G35500 shikimate kinase like 2 shikimate kinase-like 2 0.9 0.3 -0.32
33 AT1G32990 plastid ribosomal protein l11 plastid ribosomal protein l11 0.9 0.3 -0.32
34 AT5G14910 Heavy metal transport/detoxification superfamily protein 0.9 0.31 -0.31
35 AT4G30720 FAD/NAD(P)-binding oxidoreductase family protein PIGMENT DEFECTIVE 327 0.9 0.31 -0.31
36 AT4G17740 Peptidase S41 family protein 0.9 0.32 -0.31
37 AT3G06730 Thioredoxin z thioredoxin putative plastidic,
Thioredoxin z		 0.9 0.31 -0.31
38 AT3G12930 Lojap-related protein 0.9 0.32 -0.31
39 AT1G55490 chaperonin 60 beta chaperonin 60 beta,
chaperonin-60beta1, LESION
INITIATION 1		 0.9 0.34 -0.35
40 AT1G53800 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G53250.1); Has 1136 Blast hits
to 882 proteins in 242 species: Archae - 2; Bacteria - 216;
Metazoa - 257; Fungi - 77; Plants - 87; Viruses - 4; Other
Eukaryotes - 493 (source: NCBI BLink).		 0.9 0.34 -0.34
41 AT5G14320 Ribosomal protein S13/S18 family EMBRYO DEFECTIVE 3137 0.9 0.32 -0.29
42 AT5G47190 Ribosomal protein L19 family protein 0.9 0.34 -0.31
43 AT2G43030 Ribosomal protein L3 family protein 0.9 0.3 -0.32
44 AT2G26930 4-(cytidine 5'-phospho)-2-C-methyl-D-erithritol kinase 4-(cytidine
5'-phospho)-2-C-methyl-D-erithrito
l kinase, 4-(cytidine
5'-phospho)-2-C-methyl-D-erithrito
l kinase, 4-(cytidine
5′-diphospho)-2-C-methyl-d-e
rythritol kinase, 4-(cytidine
5′-diphospho)-2-C-methyl-d-e
rythritol kinase, ISPE, PIGMENT
DEFECTIVE 277		 0.9 0.3 -0.3
45 AT3G53460 chloroplast RNA-binding protein 29 chloroplast RNA-binding protein 29 0.9 0.31 -0.32
46 AT1G64510 Translation elongation factor EF1B/ribosomal protein S6
family protein		 0.9 0.31 -0.31
47 AT4G31850 proton gradient regulation 3 proton gradient regulation 3 0.9 0.31 -0.33
48 AT3G44890 ribosomal protein L9 ribosomal protein L9 0.9 0.31 -0.32
49 AT1G79850 ribosomal protein S17 CS17, PIGMENT DEFECTIVE 347,
PLASTID RIBOSOMAL SMALL SUBUNIT
PROTEIN 17, ribosomal protein S17		 0.9 0.31 -0.3
50 AT3G52150 RNA-binding (RRM/RBD/RNP motifs) family protein 0.9 0.32 -0.32
51 AT2G39670 Radical SAM superfamily protein 0.9 0.31 -0.29
52 AT3G56910 plastid-specific 50S ribosomal protein 5 plastid-specific 50S ribosomal
protein 5		 0.9 0.31 -0.34
53 AT3G04260 plastid transcriptionally active 3 PIGMENT DEFECTIVE 324, plastid
transcriptionally active 3		 0.9 0.32 -0.29
54 AT1G14030 Rubisco methyltransferase family protein 0.9 0.32 -0.32
55 AT2G34640 plastid transcriptionally active 12 HEMERA, plastid transcriptionally
active 12		 0.89 0.31 -0.31
56 AT5G58250 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
thylakoid, chloroplast; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 14 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF2488
(InterPro:IPR019616); Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes -
339 (source: NCBI BLink).		 EMBRYO DEFECTIVE 3143 0.89 0.31 -0.32
57 AT2G29180 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 34
Blast hits to 33 proteins in 16 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 33; Viruses
- 0; Other Eukaryotes - 1 (source: NCBI BLink).		 0.89 0.31 -0.31
58 AT3G28460 methyltransferases 0.89 0.31 -0.3
59 AT1G78630 Ribosomal protein L13 family protein embryo defective 1473 0.89 0.31 -0.33
60 AT1G35680 Ribosomal protein L21 chloroplast ribosomal protein L21 0.89 0.29 -0.32
61 AT3G59040 Tetratricopeptide repeat (TPR)-like superfamily protein 0.89 0.31 -0.33
62 AT2G36990 RNApolymerase sigma-subunit F SIGMA FACTOR 6, SIGMA FACTOR 6,
RNApolymerase sigma-subunit F,
SOLDAT8		 0.89 0.3 -0.3
63 AT3G62910 Peptide chain release factor 1 ALBINO AND PALE GREEN 0.89 0.32 -0.32
64 AT4G38160 Mitochondrial transcription termination factor family
protein		 pigment defective 191 0.89 0.32 -0.33
65 AT3G20230 Ribosomal L18p/L5e family protein 0.89 0.3 -0.31
66 AT1G05190 Ribosomal protein L6 family embryo defective 2394 0.89 0.3 -0.32
67 AT5G51100 Fe superoxide dismutase 2 Fe superoxide dismutase 2 0.89 0.31 -0.33
68 AT5G38290 Peptidyl-tRNA hydrolase family protein 0.89 0.3 -0.32
69 AT1G69200 fructokinase-like 2 fructokinase-like 2 0.89 0.3 -0.31
70 AT4G24750 Rhodanese/Cell cycle control phosphatase superfamily
protein		 0.89 0.31 -0.31
71 AT5G46580 pentatricopeptide (PPR) repeat-containing protein 0.89 0.31 -0.32
72 AT2G21385 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 49
Blast hits to 49 proteins in 20 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses
- 0; Other Eukaryotes - 5 (source: NCBI BLink).		 0.89 0.32 -0.31
73 AT5G19620 outer envelope protein of 80 kDa ARABIDOPSIS THALIANA OUTER
ENVELOPE PROTEIN OF 80 KDA, EMBRYO
DEFECTIVE 213, outer envelope
protein of 80 kDa, translocon at
the outer envelope membrane of
chloroplasts 75-V		 0.89 0.31 -0.3
74 AT1G56050 GTP-binding protein-related 0.88 0.32 -0.31
75 AT3G29185 Domain of unknown function (DUF3598) 0.88 0.31 -0.3
76 AT2G45270 glycoprotease 1 glycoprotease 1 0.88 0.32 -0.31
77 AT5G10690 pentatricopeptide (PPR) repeat-containing protein / CBS
domain-containing protein		 0.88 0.29 -0.31
78 AT3G15190 chloroplast 30S ribosomal protein S20, putative 0.88 0.34 -0.31
79 AT3G14930 Uroporphyrinogen decarboxylase HEME1 0.88 0.32 -0.31
80 AT2G33450 Ribosomal L28 family 0.88 0.31 -0.32
81 AT1G02280 translocon at the outer envelope membrane of chloroplasts
33		 ATTOC33, PLASTID PROTEIN IMPORT 1,
translocon at the outer envelope
membrane of chloroplasts 33		 0.88 0.29 -0.3
82 AT5G44650 Encodes a chloroplast protein that induces tolerance to
multiple environmental stresses and reduces photooxidative
damage.		 Arabidopsis thaliana chloroplast
protein-enhancing stress
tolerance, chloroplast
protein-enhancing stress
tolerance, Ycf3-interacting
protein 1		 0.88 0.32 -0.31
83 AT2G38140 plastid-specific ribosomal protein 4 plastid-specific ribosomal protein
4		 0.88 0.33 -0.32
84 AT4G16390 pentatricopeptide (PPR) repeat-containing protein suppressor of variegation 7 0.88 0.3 -0.3
85 AT1G36390 Co-chaperone GrpE family protein 0.88 0.33 -0.3
86 AT5G55220 trigger factor type chaperone family protein 0.88 0.34 -0.29
87 AT1G17650 glyoxylate reductase 2 glyoxylate reductase 2, GLYOXYLATE
REDUCTASE 2		 0.88 0.33 -0.33
88 AT3G53900 uracil phosphoribosyltransferase PYRIMIDINE R, uracil
phosphoribosyltransferase		 0.88 0.34 -0.31
89 AT1G29070 Ribosomal protein L34 0.88 0.31 -0.3
90 AT5G13510 Ribosomal protein L10 family protein EMBRYO DEFECTIVE 3136 0.88 0.32 -0.32
91 AT5G20630 germin 3 ARABIDOPSIS THALIANA GERMIN 3,
germin 3, GERMIN-LIKE PROTEIN 3,
GLP3A, GLP3B		 0.88 0.32 -0.33
92 AT1G02150 Tetratricopeptide repeat (TPR)-like superfamily protein 0.88 0.31 -0.31
93 AT2G37220 RNA-binding (RRM/RBD/RNP motifs) family protein 0.88 0.31 -0.34
94 AT4G29060 elongation factor Ts family protein embryo defective 2726 0.87 0.32 -0.32
95 AT3G03710 polyribonucleotide nucleotidyltransferase, putative PIGMENT DEFECTIVE 326,
POLYNUCLEOTIDE PHOSPHORYLASE,
resistant to inhibition with FSM
10		 0.87 0.32 -0.32
96 AT1G62780 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 14 growth stages; Has 94
Blast hits to 94 proteins in 35 species: Archae - 6;
Bacteria - 10; Metazoa - 21; Fungi - 2; Plants - 48;
Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).		 0.87 0.32 -0.31
97 AT2G30695 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
protein folding, protein transport; LOCATED IN: chloroplast
stroma, chloroplast; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Trigger factor, ribosome-binding, bacterial
(InterPro:IPR008881); Has 253 Blast hits to 253 proteins in
72 species: Archae - 0; Bacteria - 138; Metazoa - 0; Fungi
- 0; Plants - 40; Viruses - 0; Other Eukaryotes - 75
(source: NCBI BLink).		 0.87 0.32 -0.33
98 AT4G20360 RAB GTPase homolog E1B ATRAB8D, RAB GTPase homolog E1B,
RAB GTPase homolog E1B		 0.87 0.3 -0.3
99 AT3G18680 Amino acid kinase family protein 0.87 0.29 -0.31
100 AT4G14890 2Fe-2S ferredoxin-like superfamily protein ferredoxin C 2 0.87 0.32 -0.31
101 AT1G33040 nascent polypeptide-associated complex subunit alpha-like
protein 5		 nascent polypeptide-associated
complex subunit alpha-like protein
5		 0.87 0.34 -0.33
102 AT2G30200 catalytics;transferases;[acyl-carrier-protein]
S-malonyltransferases;binding		 EMBRYO DEFECTIVE 3147 0.87 0.3 -0.32
103 AT3G21300 RNA methyltransferase family protein 0.87 0.33 -0.32
104 AT3G57180 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 BRASSINAZOLE(BRZ) INSENSITIVE PALE
GREEN 2		 0.87 0.3 -0.31
105 AT1G60230 Radical SAM superfamily protein 0.87 0.29 -0.33
106 AT1G70200 RNA-binding (RRM/RBD/RNP motifs) family protein 0.87 0.31 -0.32
107 AT5G50280 Pentatricopeptide repeat (PPR) superfamily protein embryo defective 1006 0.87 0.32 -0.31
108 AT2G39140 pseudouridine synthase family protein PIGMENT DEFECTIVE 328, SUPPRESSOR
OF VARIEGATION 1		 0.87 0.34 -0.31
109 AT1G09900 Pentatricopeptide repeat (PPR-like) superfamily protein 0.87 0.31 -0.33
110 AT4G24770 31-kDa RNA binding protein ARABIDOPSIS THALIANA RNA BINDING
PROTEIN, APPROXIMATELY 31 KD,
ATRBP33, CP31, 31-kDa RNA binding
protein		 0.87 0.3 -0.3
111 AT5G01590 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 60
Blast hits to 59 proteins in 31 species: Archae - 0;
Bacteria - 20; Metazoa - 1; Fungi - 2; Plants - 33; Viruses
- 0; Other Eukaryotes - 4 (source: NCBI BLink).		 0.87 0.33 -0.33
112 AT3G14110 Tetratricopeptide repeat (TPR)-like superfamily protein FLUORESCENT IN BLUE LIGHT 0.87 0.34 -0.31
113 AT3G25480 Rhodanese/Cell cycle control phosphatase superfamily
protein		 0.87 0.3 -0.34
114 AT4G02990 Mitochondrial transcription termination factor family
protein		 BELAYA SMERT, RUGOSA 2 0.87 0.32 -0.33
115 AT5G11450 Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP
family protein		 PsbP domain protein 5 0.87 0.31 -0.32
116 AT1G48460 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast envelope; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G63040.1); Has 60 Blast hits to 60 proteins in 14
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 60; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.87 0.31 -0.3
117 AT4G25990 CCT motif family protein CIL 0.87 0.31 -0.31
118 AT3G25290 Auxin-responsive family protein -0.82 0.31 -0.33
119 AT5G06750 Protein phosphatase 2C family protein -0.81 0.31 -0.31
120 AT5G59490 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.76 0.31 -0.32
121 AT4G39950 cytochrome P450, family 79, subfamily B, polypeptide 2 cytochrome P450, family 79,
subfamily B, polypeptide 2		 -0.75 0.31 -0.31
122 AT2G47130 NAD(P)-binding Rossmann-fold superfamily protein AtSDR3, short-chain
dehydrogenase/reductase 2		 -0.74 0.31 -0.32
123 AT1G35260 MLP-like protein 165 MLP-like protein 165 -0.74 0.33 -0.31
124 AT5G65870 phytosulfokine 5 precursor phytosulfokine 5 precursor, PSK5,
phytosulfokine 5 precursor		 -0.74 0.34 -0.32
125 AT1G77920 bZIP transcription factor family protein -0.73 0.3 -0.31
126 AT3G49350 Ypt/Rab-GAP domain of gyp1p superfamily protein -0.73 0.33 -0.3
127 AT1G55920 serine acetyltransferase 2;1 serine acetyltransferase 2;1,
SERINE ACETYLTRANSFERASE 1, SERINE
ACETYLTRANSFERASE 5, serine
acetyltransferase 2;1		 -0.71 0.31 -0.3
128 AT1G17745 D-3-phosphoglycerate dehydrogenase 3-phosphoglycerate dehydrogenase -0.71 0.32 -0.34