AGICode | AT4G34265 |
Description | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G15000.3); Has 76 Blast hits to 76 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT4G34265 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G15000.3); Has 76 Blast hits to 76 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
1 | 0.31 | -0.32 | |||
2 | AT2G43570 | chitinase, putative | chitinase, putative | -0.82 | 0.32 | -0.32 | ||
3 | AT5G59310 | lipid transfer protein 4 | lipid transfer protein 4 | -0.8 | 0.31 | -0.31 | ||
4 | AT4G16240 | unknown protein; Has 17010 Blast hits to 4557 proteins in 509 species: Archae - 32; Bacteria - 2889; Metazoa - 6537; Fungi - 648; Plants - 4769; Viruses - 447; Other Eukaryotes - 1688 (source: NCBI BLink). |
-0.78 | 0.31 | -0.33 | |||
5 | AT5G53870 | early nodulin-like protein 1 | AtENODL1, early nodulin-like protein 1 |
-0.78 | 0.29 | -0.32 | ||
6 | AT5G20060 | alpha/beta-Hydrolases superfamily protein | 0.76 | 0.3 | -0.3 | |||
7 | AT4G30960 | SOS3-interacting protein 3 | CBL-INTERACTING PROTEIN KINASE 6, CBL-INTERACTING PROTEIN KINASE 6, SOS3-interacting protein 3, SNF1-RELATED PROTEIN KINASE 3.14 |
-0.76 | 0.34 | -0.32 | ||
8 | AT2G18050 | histone H1-3 | histone H1-3 | -0.76 | 0.32 | -0.3 | ||
9 | AT4G17300 | Class II aminoacyl-tRNA and biotin synthetases superfamily protein |
ATNS1, NS1, ovule abortion 8 | 0.75 | 0.31 | -0.33 | ||
10 | AT5G59320 | lipid transfer protein 3 | lipid transfer protein 3 | -0.75 | 0.32 | -0.33 | ||
11 | AT5G07300 | Calcium-dependent phospholipid-binding Copine family protein |
BONZAI 2 | 0.74 | 0.34 | -0.32 | ||
12 | AT4G26090 | NB-ARC domain-containing disease resistance protein | RESISTANT TO P. SYRINGAE 2 | -0.74 | 0.33 | -0.32 | ||
13 | AT1G48000 | myb domain protein 112 | myb domain protein 112, myb domain protein 112 |
-0.73 | 0.29 | -0.32 | ||
14 | AT3G52420 | outer envelope membrane protein 7 | OUTER ENVELOPE MEMBRANE PROTEIN 7, outer envelope membrane protein 7 |
0.73 | 0.3 | -0.34 | ||
15 | AT1G13580 | LAG1 longevity assurance homolog 3 | LAG1 longevity assurance homolog 3, LAG One Homologue 3 |
0.72 | 0.33 | -0.32 | ||
16 | AT5G50460 | secE/sec61-gamma protein transport protein | 0.72 | 0.32 | -0.31 | |||
17 | AT1G52690 | Late embryogenesis abundant protein (LEA) family protein | LATE EMBRYOGENESIS ABUNDANT 7 | -0.71 | 0.34 | -0.32 | ||
18 | AT5G03040 | IQ-domain 2 | IQ-domain 2 | 0.71 | 0.31 | -0.35 | ||
19 | AT1G09660 | RNA-binding KH domain-containing protein | 0.71 | 0.32 | -0.29 | |||
20 | AT1G73680 | alpha dioxygenase | alpha dioxygenase | -0.71 | 0.32 | -0.3 | ||
21 | AT1G24170 | Nucleotide-diphospho-sugar transferases superfamily protein | GALACTURONOSYLTRANSFERASE-LIKE 8, LGT9 |
0.71 | 0.31 | -0.29 | ||
22 | AT3G13445 | TATA binding protein 1 | TATA binding protein 1, TRANSCRIPTION FACTOR IID-1 |
0.7 | 0.33 | -0.33 | ||
23 | AT5G43010 | regulatory particle triple-A ATPase 4A | regulatory particle triple-A ATPase 4A |
0.7 | 0.31 | -0.29 | ||
24 | AT3G62090 | phytochrome interacting factor 3-like 2 | PHYTOCHROME-INTERACTING FACTOR 6, phytochrome interacting factor 3-like 2 |
-0.7 | 0.32 | -0.32 | ||
25 | AT5G10980 | Histone superfamily protein | 0.69 | 0.32 | -0.31 | |||
26 | AT1G33240 | GT-2-like 1 | GT2-LIKE 1, GT-2-like 1 | 0.69 | 0.32 | -0.34 | ||
27 | AT2G16460 | Protein of unknown function (DUF1640) | 0.69 | 0.32 | -0.33 | |||
28 | AT2G28430 | unknown protein; Has 28 Blast hits to 28 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.69 | 0.32 | -0.33 | |||
29 | AT2G34160 | Alba DNA/RNA-binding protein | 0.69 | 0.32 | -0.34 | |||
30 | AT5G06730 | Peroxidase superfamily protein | -0.69 | 0.3 | -0.31 | |||
31 | AT3G61130 | galacturonosyltransferase 1 | galacturonosyltransferase 1, LGT1 | 0.69 | 0.34 | -0.31 | ||
32 | AT4G17030 | expansin-like B1 | AT-EXPR, expansin-like B1, ATEXPR1, ATHEXP BETA 3.1, expansin-like B1, EXPR |
-0.69 | 0.3 | -0.32 | ||
33 | AT4G19810 | Glycosyl hydrolase family protein with chitinase insertion domain |
class V chitinase | -0.69 | 0.31 | -0.31 | ||
34 | AT4G27760 | NAD(P)-binding Rossmann-fold superfamily protein | FOREVER YOUNG, FEY3 | 0.68 | 0.3 | -0.3 | ||
35 | AT2G04360 | unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). |
0.68 | 0.31 | -0.32 | |||
36 | AT1G04220 | 3-ketoacyl-CoA synthase 2 | 3-ketoacyl-CoA synthase 2 | -0.68 | 0.31 | -0.33 | ||
37 | AT5G47930 | Zinc-binding ribosomal protein family protein | 0.68 | 0.31 | -0.31 | |||
38 | AT1G18580 | galacturonosyltransferase 11 | galacturonosyltransferase 11 | 0.68 | 0.33 | -0.32 | ||
39 | AT4G34860 | Plant neutral invertase family protein | alkaline/neutral invertase B | -0.67 | 0.34 | -0.31 | ||
40 | AT5G43840 | heat shock transcription factor A6A | heat shock transcription factor A6A, heat shock transcription factor A6A |
-0.67 | 0.3 | -0.29 | ||
41 | AT3G17520 | Late embryogenesis abundant protein (LEA) family protein | -0.67 | 0.3 | -0.3 | |||
42 | AT1G79360 | organic cation/carnitine transporter 2 | organic cation/carnitine transporter 2, ORGANIC CATION TRANSPORTER 2, organic cation/carnitine transporter 2 |
-0.67 | 0.31 | -0.32 | ||
43 | AT3G07640 | unknown protein; Has 27 Blast hits to 27 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.67 | 0.33 | -0.32 | |||
44 | AT2G05755 | Nodulin MtN21 /EamA-like transporter family protein | 0.67 | 0.32 | -0.29 | |||
45 | AT5G03190 | conserved peptide upstream open reading frame 47 | conserved peptide upstream open reading frame 47 |
-0.67 | 0.3 | -0.32 | ||
46 | AT4G33550 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
-0.66 | 0.31 | -0.31 | |||
47 | AT5G32450 | RNA binding (RRM/RBD/RNP motifs) family protein | 0.66 | 0.31 | -0.34 | |||
48 | AT2G01070 | Lung seven transmembrane receptor family protein | 0.66 | 0.31 | -0.34 | |||
49 | AT4G31720 | TBP-associated factor II 15 | SALT TOLERANCE DURING GERMINATION 1, TBP-ASSOCIATED FACTOR 10, TBP-associated factor II 15 |
0.66 | 0.33 | -0.31 | ||
50 | AT2G42810 | protein phosphatase 5.2 | Arabidopsis thaliana protein phosphatase 5, PAPP5, PROTEIN PHOSPHATASE 5, protein phosphatase 5.2 |
0.66 | 0.33 | -0.31 | ||
51 | AT3G24310 | myb domain protein 305 | MYB DOMAIN PROTEIN 71, myb domain protein 305 |
-0.66 | 0.31 | -0.33 | ||
52 | AT1G12530 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G56420.1); Has 54 Blast hits to 53 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.66 | 0.33 | -0.31 | |||
53 | AT5G43720 | Protein of unknown function (DUF2361) | 0.66 | 0.31 | -0.31 | |||
54 | AT1G73220 | organic cation/carnitine transporter1 | organic cation/carnitine transporter1, organic cation/carnitine transporter1 |
-0.65 | 0.31 | -0.3 | ||
55 | AT1G06830 | Glutaredoxin family protein | 0.65 | 0.33 | -0.32 | |||
56 | AT4G26610 | D6 protein kinase like 1 | AGC1-2, D6 protein kinase like 1 | 0.65 | 0.34 | -0.33 | ||
57 | AT5G34940 | glucuronidase 3 | glucuronidase 3, glucuronidase 3 | -0.65 | 0.3 | -0.32 | ||
58 | AT3G02900 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G16660.1); Has 80 Blast hits to 80 proteins in 21 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.65 | 0.34 | -0.33 | |||
59 | AT4G37380 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.65 | 0.32 | -0.32 | |||
60 | AT2G30105 | CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT5G07910.1). |
0.65 | 0.31 | -0.32 | |||
61 | AT3G58630 | sequence-specific DNA binding transcription factors | 0.65 | 0.33 | -0.32 | |||
62 | AT1G15310 | signal recognition particle 54 kDa subunit | signal recognition particle 54 kDa subunit, SIGNAL RECOGNITION PARTICLE 54 KDA SUBUNIT |
-0.65 | 0.31 | -0.32 | ||
63 | AT5G52560 | UDP-sugar pyrophosphorylase | UDP-sugar pyrophosphorylase, UDP-sugar pyrophosphorylase |
0.65 | 0.32 | -0.32 | ||
64 | AT5G12230 | MED19A; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G19480.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
MED19A | 0.65 | 0.32 | -0.32 | ||
65 | AT1G55740 | seed imbibition 1 | seed imbibition 1, raffinose synthase 1, seed imbibition 1 |
-0.65 | 0.31 | -0.3 | ||
66 | AT1G76340 | golgi nucleotide sugar transporter 3 | golgi nucleotide sugar transporter 3 |
0.64 | 0.29 | -0.31 | ||
67 | AT5G22460 | alpha/beta-Hydrolases superfamily protein | -0.64 | 0.31 | -0.33 | |||
68 | AT1G55330 | arabinogalactan protein 21 | arabinogalactan protein 21, ARABINOGALACTAN PROTEIN 21 |
0.64 | 0.35 | -0.34 | ||
69 | AT3G16030 | lectin protein kinase family protein | CALLUS EXPRESSION OF RBCS 101 | -0.64 | 0.34 | -0.32 | ||
70 | AT1G24450 | Ribonuclease III family protein | NUCLEAR FUSION DEFECTIVE 2 | -0.64 | 0.32 | -0.32 | ||
71 | AT5G57810 | tetraspanin15 | tetraspanin15 | -0.64 | 0.33 | -0.31 | ||
72 | AT3G12500 | basic chitinase | basic chitinase, B-CHI, CHI-B, basic chitinase, PATHOGENESIS-RELATED 3, PATHOGENESIS-RELATED 3 |
-0.63 | 0.34 | -0.31 | ||
73 | AT4G18593 | dual specificity protein phosphatase-related | 0.63 | 0.31 | -0.31 | |||
74 | AT3G15720 | Pectin lyase-like superfamily protein | -0.63 | 0.33 | -0.31 | |||
75 | AT4G26300 | Arginyl-tRNA synthetase, class Ic | embryo defective 1027 | 0.63 | 0.33 | -0.31 | ||
76 | AT5G48470 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.63 | 0.33 | -0.3 | |||
77 | AT1G17590 | nuclear factor Y, subunit A8 | nuclear factor Y, subunit A8 | -0.63 | 0.32 | -0.32 | ||
78 | AT2G45120 | C2H2-like zinc finger protein | 0.63 | 0.29 | -0.3 | |||
79 | AT2G17265 | homoserine kinase | DOWNY MILDEW RESISTANT 1, homoserine kinase |
0.63 | 0.33 | -0.29 | ||
80 | AT2G25000 | WRKY DNA-binding protein 60 | ATWRKY60, WRKY DNA-binding protein 60 |
-0.62 | 0.31 | -0.34 | ||
81 | AT4G21620 | glycine-rich protein | -0.62 | 0.32 | -0.29 | |||
82 | AT2G34610 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G30190.1); Has 342 Blast hits to 279 proteins in 74 species: Archae - 0; Bacteria - 7; Metazoa - 76; Fungi - 18; Plants - 51; Viruses - 0; Other Eukaryotes - 190 (source: NCBI BLink). |
-0.62 | 0.32 | -0.33 | |||
83 | AT4G30160 | villin 4 | ATVLN4, villin 4 | 0.62 | 0.3 | -0.32 | ||
84 | AT3G55400 | methionyl-tRNA synthetase / methionine--tRNA ligase / MetRS (cpMetRS) |
OVULE ABORTION 1 | 0.62 | 0.31 | -0.33 | ||
85 | AT5G48500 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.62 | 0.31 | -0.29 | |||
86 | AT1G08750 | Peptidase C13 family | 0.62 | 0.3 | -0.32 | |||
87 | AT1G35510 | O-fucosyltransferase family protein | 0.62 | 0.32 | -0.33 | |||
88 | AT1G32370 | tobamovirus multiplication 2B | tobamovirus multiplication 2B, TTM1 |
0.62 | 0.31 | -0.35 | ||
89 | AT5G64920 | COP1-interacting protein 8 | COP1-interacting protein 8 | 0.62 | 0.31 | -0.33 | ||
90 | AT4G33530 | K+ uptake permease 5 | K+ uptake permease 5 | 0.62 | 0.31 | -0.33 | ||
91 | AT3G11700 | FASCICLIN-like arabinogalactan protein 18 precursor | FASCICLIN-like arabinogalactan protein 18 precursor |
0.62 | 0.3 | -0.33 | ||
92 | AT1G01830 | ARM repeat superfamily protein | -0.61 | 0.31 | -0.31 | |||
93 | AT5G13170 | senescence-associated gene 29 | AtSWEET15, senescence-associated gene 29, SWEET15 |
-0.61 | 0.31 | -0.31 | ||
94 | AT5G04010 | F-box family protein | -0.61 | 0.31 | -0.29 | |||
95 | AT1G74300 | alpha/beta-Hydrolases superfamily protein | -0.61 | 0.32 | -0.32 | |||
96 | AT4G09500 | UDP-Glycosyltransferase superfamily protein | -0.6 | 0.33 | -0.32 | |||
97 | AT3G51750 | unknown protein; Has 15 Blast hits to 14 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 15; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.6 | 0.31 | -0.31 | |||
98 | AT4G38210 | expansin A20 | ATEXP20, expansin A20, ATHEXP ALPHA 1.23, EXPANSIN 20, expansin A20 |
-0.6 | 0.32 | -0.33 | ||
99 | AT3G20470 | glycine-rich protein 5 | ATGRP-5, ATGRP5, GLYCINE-RICH PROTEIN 5, glycine-rich protein 5 |
-0.59 | 0.3 | -0.33 | ||
100 | AT5G18930 | Adenosylmethionine decarboxylase family protein | BUSHY AND DWARF 2, SAMDC4 | -0.59 | 0.28 | -0.32 | ||
101 | AT3G15670 | Late embryogenesis abundant protein (LEA) family protein | -0.59 | 0.3 | -0.3 | |||
102 | AT5G06510 | nuclear factor Y, subunit A10 | nuclear factor Y, subunit A10 | -0.59 | 0.33 | -0.31 | ||
103 | AT2G43580 | Chitinase family protein | -0.58 | 0.29 | -0.33 | |||
104 | AT1G07720 | 3-ketoacyl-CoA synthase 3 | 3-ketoacyl-CoA synthase 3 | -0.58 | 0.32 | -0.3 | ||
105 | AT1G60280 | NAC domain containing protein 23 | NAC domain containing protein 23, NAC domain containing protein 23 |
-0.58 | 0.3 | -0.34 | ||
106 | AT2G16630 | Pollen Ole e 1 allergen and extensin family protein | -0.58 | 0.32 | -0.33 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
107 | C0153 | Monogalactosyldiacylgycerol-34:6 | - | a Monogalactosyldiacylgycerol | glycolipid biosynthesis, triacylglycerol degradation, linoleate biosynthesis I, glutathione redox reactions I |
0.8 | 0.4 | -0.44 | ||
108 | C0146 | Mannitol | D-Mannitol | Mannitol | mannitol degradation II | -0.78 | 0.46 | -0.44 | ||
109 | C0132 | Kaempferol-3-O-rutinoside | - | - | - | -0.75 | 0.45 | -0.48 | ||
110 | C0143 | Maltitol | - | - | starch degradation II | -0.69 | 0.45 | -0.45 | ||
111 | C0080 | Digalactosyldiacylglycerol-34:6 | - | Digalactosyldiacylglycerol-34:6 | triacylglycerol degradation, linoleate biosynthesis I, glycolipid biosynthesis, glutathione redox reactions I |
0.65 | 0.44 | -0.45 |