AT4G34100 : -
Query Information
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AGICode AT4G34100
Description RING/U-box superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G34100 RING/U-box superfamily protein 1 0.32 -0.3
2 AT1G17440 Transcription initiation factor TFIID subunit A CYTOKININ-HYPERSENSITIVE 1,
ENHANCED ETHYLENE RESPONSE 4,
TBP-ASSOCIATED FACTOR 12B		 0.75 0.32 -0.32
3 AT5G53130 cyclic nucleotide gated channel 1 CYCLIC NUCLEOTIDE-GATED CHANNEL 1,
cyclic nucleotide gated channel 1		 0.73 0.32 -0.31
4 AT1G43620 UDP-Glycosyltransferase superfamily protein TRANSPARENT TESTA 15, UGT80B1 0.72 0.32 -0.3
5 AT5G66320 GATA transcription factor 5 GATA transcription factor 5 0.72 0.3 -0.31
6 AT2G27950 Ring/U-Box superfamily protein 0.71 0.32 -0.29
7 AT1G55680 Transducin/WD40 repeat-like superfamily protein 0.7 0.32 -0.29
8 AT5G39850 Ribosomal protein S4 -0.68 0.32 -0.3
9 AT4G00450 RNA polymerase II transcription mediators CENTER CITY, CRYPTIC PRECOCIOUS 0.68 0.33 -0.32
10 AT5G64170 dentin sialophosphoprotein-related 0.67 0.32 -0.34
11 AT2G44380 Cysteine/Histidine-rich C1 domain family protein -0.67 0.31 -0.33
12 AT3G03320 RNA-binding ASCH domain protein -0.67 0.31 -0.31
13 AT5G56870 beta-galactosidase 4 beta-galactosidase 4 -0.67 0.31 -0.31
14 AT2G39480 P-glycoprotein 6 ATP-binding cassette B6,
P-glycoprotein 6		 0.67 0.32 -0.3
15 AT1G27070 5'-AMP-activated protein kinase-related 0.66 0.31 -0.32
16 AT4G19420 Pectinacetylesterase family protein -0.66 0.34 -0.32
17 AT2G47070 squamosa promoter binding protein-like 1 squamosa promoter binding
protein-like 1		 0.66 0.29 -0.33
18 AT2G40840 disproportionating enzyme 2 disproportionating enzyme 2 0.65 0.3 -0.34
19 AT3G20110 cytochrome P450, family 705, subfamily A, polypeptide 20 cytochrome P450, family 705,
subfamily A, polypeptide 20		 -0.65 0.3 -0.33
20 AT2G22350 transposable element gene 0.65 0.3 -0.32
21 AT1G80460 Actin-like ATPase superfamily protein GLI1, nonhost resistance to P. s.
phaseolicola 1		 -0.65 0.31 -0.31
22 AT1G65930 cytosolic NADP+-dependent isocitrate dehydrogenase cytosolic NADP+-dependent
isocitrate dehydrogenase		 -0.64 0.32 -0.32
23 AT5G23890 LOCATED IN: mitochondrion, chloroplast thylakoid membrane,
chloroplast, plastid, chloroplast envelope; EXPRESSED IN:
24 plant structures; EXPRESSED DURING: 14 growth stages;
CONTAINS InterPro DOMAIN/s: S-layer homology domain
(InterPro:IPR001119); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G52410.2); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.64 0.31 -0.3
24 AT1G12845 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 8 Blast hits to 8
proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 8; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.64 0.32 -0.31
25 AT5G27930 Protein phosphatase 2C family protein 0.64 0.33 -0.34
26 AT2G16230 O-Glycosyl hydrolases family 17 protein -0.63 0.32 -0.33
27 AT5G12350 Regulator of chromosome condensation (RCC1) family with
FYVE zinc finger domain		 0.63 0.31 -0.31
28 AT2G01330 nucleotide binding 0.62 0.3 -0.31
29 AT4G08690 Sec14p-like phosphatidylinositol transfer family protein -0.62 0.35 -0.3
30 AT1G55690 Sec14p-like phosphatidylinositol transfer family protein 0.62 0.3 -0.31
31 AT2G29330 tropinone reductase tropinone reductase -0.62 0.28 -0.31
32 AT1G04010 phospholipid sterol acyl transferase 1 ATPSAT1, phospholipid sterol acyl
transferase 1		 0.62 0.33 -0.33
33 AT2G43680 IQ-domain 14 IQ-domain 14 0.62 0.32 -0.33
34 AT1G03850 Glutaredoxin family protein glutaredoxin 13, glutaredoxin 13 -0.62 0.32 -0.29
35 AT4G36670 Major facilitator superfamily protein AtPLT6, AtPMT6, polyol transporter
6, polyol/monosaccharide
transporter 6		 -0.61 0.33 -0.32
36 AT1G13300 myb-like transcription factor family protein HYPERSENSITIVITY TO LOW
PI-ELICITED PRIMARY ROOT
SHORTENING 1		 -0.61 0.32 -0.3
37 AT1G74030 enolase 1 enolase 1 -0.61 0.33 -0.33
38 AT1G48620 high mobility group A5 high mobility group A5 0.61 0.31 -0.33
39 AT3G45510 RING/U-box protein 0.61 0.32 -0.32
40 AT1G51440 alpha/beta-Hydrolases superfamily protein 0.61 0.32 -0.31
41 AT4G24680 modifier of snc1 MODIFIER OF snc1 0.6 0.32 -0.31
42 AT5G07280 Leucine-rich repeat transmembrane protein kinase EXCESS MICROSPOROCYTES1, EXTRA
SPOROGENOUS CELLS		 0.6 0.32 -0.31
43 AT3G01670 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G01680.1); Has 121 Blast hits
to 111 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 121; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 sieve element occlusion a 0.6 0.32 -0.3
44 AT1G79260 CONTAINS InterPro DOMAIN/s: Domain of unknown function
DUF1794 (InterPro:IPR014878); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.6 0.34 -0.32
45 AT5G08230 Tudor/PWWP/MBT domain-containing protein 0.59 0.3 -0.31
46 AT1G02860 SPX (SYG1/Pho81/XPR1) domain-containing protein BENZOIC ACID HYPERSENSITIVE 1,
nitrogen limitation adaptation		 -0.59 0.34 -0.3
47 AT1G58220 Homeodomain-like superfamily protein 0.59 0.31 -0.31
48 AT2G39750 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.59 0.32 -0.31
49 AT4G24560 ubiquitin-specific protease 16 ubiquitin-specific protease 16 0.59 0.33 -0.32
50 AT4G35240 Protein of unknown function (DUF630 and DUF632) 0.58 0.3 -0.32
51 AT1G55810 uridine kinase-like 3 uridine kinase-like 3 -0.58 0.3 -0.32
52 AT4G05140 Nucleoside transporter family protein 0.58 0.34 -0.29
53 AT5G38790 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G30580.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.58 0.3 -0.32
54 AT5G18340 ARM repeat superfamily protein -0.57 0.32 -0.32
55 AT5G54650 formin homology5 FORMIN HOMOLOGY 5, formin
homology5		 0.57 0.31 -0.32
56 AT5G28440 unknown protein 0.57 0.3 -0.3
57 AT2G04795 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G35732.1); Has 18 Blast hits
to 18 proteins in 6 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.57 0.31 -0.32
58 AT3G17750 Protein kinase superfamily protein 0.57 0.3 -0.31
59 AT1G20350 translocase inner membrane subunit 17-1 translocase inner membrane subunit
17-1, translocase inner membrane
subunit 17-1		 -0.57 0.31 -0.32
60 AT1G60490 vacuolar protein sorting 34 ATVPS34, PHOSPATIDYLINOSITOL
3-KINASE, vacuolar protein sorting
34		 0.56 0.29 -0.32
61 AT2G33480 NAC domain containing protein 41 NAC domain containing protein 41,
NAC domain containing protein 41		 -0.56 0.32 -0.32
62 AT5G51430 conserved oligomeric Golgi complex component-related / COG
complex component-related		 EMBRYO YELLOW 0.56 0.33 -0.34
63 ATMG00450 hypothetical protein ORF106B -0.56 0.31 -0.31
64 AT5G14540 Protein of unknown function (DUF1421) 0.56 0.31 -0.31
65 AT3G01290 SPFH/Band 7/PHB domain-containing membrane-associated
protein family		 AtHIR2, hypersensitive induced
reaction 2		 -0.56 0.33 -0.31
66 AT1G29080 Papain family cysteine protease 0.56 0.32 -0.31
67 AT4G24260 glycosyl hydrolase 9A3 glycosyl hydrolase 9A3, glycosyl
hydrolase 9A3, KOR3		 -0.56 0.32 -0.3
68 AT4G29440 Regulator of Vps4 activity in the MVB pathway protein 0.56 0.31 -0.31
69 AT1G68880 basic leucine-zipper 8 basic leucine-zipper 8, basic
leucine-zipper 8		 -0.56 0.32 -0.35
70 AT5G55130 co-factor for nitrate, reductase and xanthine dehydrogenase
5		 co-factor for nitrate, reductase
and xanthine dehydrogenase 5,
SIRTINOL RESISTANT 1		 -0.55 0.31 -0.3
71 AT2G31810 ACT domain-containing small subunit of acetolactate
synthase protein		 -0.55 0.32 -0.32
72 AT3G05070 CONTAINS InterPro DOMAIN/s: mRNA splicing factor, Cwf18
(InterPro:IPR013169); Has 292 Blast hits to 292 proteins in
153 species: Archae - 0; Bacteria - 0; Metazoa - 118; Fungi
- 83; Plants - 38; Viruses - 11; Other Eukaryotes - 42
(source: NCBI BLink).		 -0.55 0.32 -0.3
73 AT1G36060 Integrase-type DNA-binding superfamily protein -0.55 0.32 -0.32
74 AT4G23510 Disease resistance protein (TIR-NBS-LRR class) family -0.54 0.33 -0.33
75 AT1G34770 CONTAINS InterPro DOMAIN/s: MAGE protein
(InterPro:IPR002190); Has 1274 Blast hits to 1260 proteins
in 85 species: Archae - 0; Bacteria - 0; Metazoa - 1104;
Fungi - 45; Plants - 49; Viruses - 0; Other Eukaryotes - 76
(source: NCBI BLink).		 -0.54 0.32 -0.3
76 AT3G02910 AIG2-like (avirulence induced gene) family protein -0.54 0.32 -0.31
77 AT1G19380 Protein of unknown function (DUF1195) -0.53 0.31 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
78 C0092 Fumaric acid - Fumarate citrulline-nitric oxide cycle,
succinate + a ubiquinone -> a ubiquinol + fumarate,
superpathway of glyoxylate cycle and fatty acid degradation,
tyrosine degradation I,
aerobic respiration (alternative oxidase pathway),
inosine-5'-phosphate biosynthesis II,
arginine biosynthesis I,
TCA cycle variation V (plant),
TCA cycle variation III (eukaryotic),
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
purine nucleotides de novo biosynthesis II,
arginine biosynthesis II (acetyl cycle),
urea cycle,
aerobic respiration (cytochrome c) 		0.71 0.32 -0.32 C0092
79 C0144 Maltose D-Maltose α-Maltose starch degradation II 0.67 0.43 -0.46 C0144
80 C0252 Threonic acid D,L-Threonic acid L-Threonate ascorbic acid degradation 0.66 0.48 -0.46 C0252