AT4G34030 : 3-methylcrotonyl-CoA carboxylase
Query Information
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AGICode AT4G34030
Description 3-methylcrotonyl-CoA carboxylase
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G34030 3-methylcrotonyl-CoA carboxylase 3-methylcrotonyl-CoA carboxylase 1 0.32 -0.29
2 AT3G53260 phenylalanine ammonia-lyase 2 ATPAL2, phenylalanine
ammonia-lyase 2		 -0.73 0.3 -0.33
3 AT3G13450 Transketolase family protein DARK INDUCIBLE 4 0.7 0.32 -0.33
4 AT1G62150 Mitochondrial transcription termination factor family
protein		 -0.7 0.32 -0.32
5 AT5G59960 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.7 0.31 -0.31
6 AT1G47250 20S proteasome alpha subunit F2 20S proteasome alpha subunit F2 -0.69 0.31 -0.32
7 AT4G17720 RNA-binding (RRM/RBD/RNP motifs) family protein -0.69 0.34 -0.33
8 AT2G30070 potassium transporter 1 potassium transporter 1, ATKT1P,
ATKUP1, potassium transporter 1,
POTASSIUM UPTAKE TRANSPORTER 1		 0.68 0.33 -0.32
9 AT4G29890 choline monooxygenase, putative (CMO-like) 0.68 0.31 -0.32
10 AT1G52590 Putative thiol-disulphide oxidoreductase DCC 0.68 0.33 -0.3
11 AT4G01790 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein -0.68 0.31 -0.3
12 AT5G14500 aldose 1-epimerase family protein 0.68 0.33 -0.31
13 AT1G43170 ribosomal protein 1 ribosomal protein 1, embryo
defective 2207, ribosomal protein
1, RPL3A		 -0.67 0.33 -0.31
14 AT5G35180 Protein of unknown function (DUF1336) 0.66 0.31 -0.33
15 AT1G03090 methylcrotonyl-CoA carboxylase alpha chain, mitochondrial /
3-methylcrotonyl-CoA carboxylase 1 (MCCA)		 MCCA 0.66 0.32 -0.31
16 AT3G16530 Legume lectin family protein -0.65 0.31 -0.3
17 AT4G36680 Tetratricopeptide repeat (TPR)-like superfamily protein -0.65 0.32 -0.31
18 AT1G49950 telomere repeat binding factor 1 TELOMERE REPEAT BINDING FACTOR 1,
telomere repeat binding factor 1		 -0.65 0.32 -0.31
19 AT5G01560 lectin receptor kinase a4.3 lectin receptor kinase a4.3 -0.65 0.33 -0.31
20 AT4G28020 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0066
(InterPro:IPR001378); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.64 0.31 -0.29
21 AT2G25080 glutathione peroxidase 1 GLUTATHIONE PEROXIDASE 1,
glutathione peroxidase 1		 0.64 0.32 -0.3
22 AT5G10710 INVOLVED IN: chromosome segregation, cell division; LOCATED
IN: chromosome, centromeric region, nucleus; EXPRESSED IN:
23 plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Centromere protein Cenp-O
(InterPro:IPR018464); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.64 0.31 -0.32
23 AT4G30900 DNAse I-like superfamily protein 0.64 0.31 -0.3
24 AT1G72190 D-isomer specific 2-hydroxyacid dehydrogenase family
protein		 0.64 0.31 -0.29
25 AT4G35310 calmodulin-domain protein kinase 5 ATCPK5, calmodulin-domain protein
kinase 5		 -0.63 0.33 -0.31
26 AT5G13690 alpha-N-acetylglucosaminidase family / NAGLU family CYCLOPS 1,
N-ACETYL-GLUCOSAMINIDASE		 0.63 0.29 -0.32
27 AT1G68370 Chaperone DnaJ-domain superfamily protein ALTERED RESPONSE TO GRAVITY 1 -0.63 0.32 -0.32
28 AT4G35987 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.63 0.29 -0.3
29 AT1G77030 hydrolases, acting on acid anhydrides, in
phosphorus-containing anhydrides;ATP-dependent
helicases;nucleic acid binding;ATP binding;RNA
binding;helicases		 -0.63 0.31 -0.31
30 AT2G20670 Protein of unknown function (DUF506) 0.62 0.33 -0.35
31 AT1G64190 6-phosphogluconate dehydrogenase family protein -0.62 0.3 -0.34
32 AT3G10740 alpha-L-arabinofuranosidase 1 ALPHA-L-ARABINOFURANOSIDASE,
ALPHA-L-ARABINOFURANOSIDASE 1,
alpha-L-arabinofuranosidase 1,
ARABIDOPSIS THALIANA
ALPHA-L-ARABINOFURANOSIDASE 1		 0.62 0.31 -0.33
33 AT5G66110 Heavy metal transport/detoxification superfamily protein heavy metal associated
isoprenylated plant protein 27		 0.62 0.32 -0.3
34 AT1G09010 glycoside hydrolase family 2 protein 0.62 0.33 -0.32
35 AT1G51920 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: stem, stamen; EXPRESSED
DURING: 4 anthesis; Has 22 Blast hits to 22 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.61 0.3 -0.32
36 AT5G03230 Protein of unknown function, DUF584 0.61 0.31 -0.31
37 AT3G17780 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
intracellular protein transport; LOCATED IN: endomembrane
system, integral to membrane, endoplasmic reticulum;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: B-cell
receptor-associated 31-like (InterPro:IPR008417); BEST
Arabidopsis thaliana protein match is: B-cell
receptor-associated 31-like (TAIR:AT1G48440.1); Has 102
Blast hits to 102 proteins in 17 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 102; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.61 0.33 -0.3
38 AT4G00750 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.61 0.32 -0.29
39 AT2G14850 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G33890.2); Has 140 Blast hits
to 132 proteins in 17 species: Archae - 0; Bacteria - 0;
Metazoa - 1; Fungi - 2; Plants - 133; Viruses - 0; Other
Eukaryotes - 4 (source: NCBI BLink).		 0.61 0.3 -0.33
40 AT4G37790 Homeobox-leucine zipper protein family HAT22 0.61 0.32 -0.29
41 AT5G49630 amino acid permease 6 amino acid permease 6 -0.61 0.32 -0.31
42 AT1G69790 Protein kinase superfamily protein 0.6 0.3 -0.32
43 AT3G13065 STRUBBELIG-receptor family 4 STRUBBELIG-receptor family 4 0.59 0.32 -0.33
44 AT1G59830 protein phosphatase 2A-2 protein phosphatase 2A-2 -0.59 0.3 -0.33
45 AT4G12110 sterol-4alpha-methyl oxidase 1-1 ATSMO1-1, sterol-4alpha-methyl
oxidase 1-1		 -0.59 0.3 -0.3
46 AT3G24070 Zinc knuckle (CCHC-type) family protein 0.59 0.3 -0.32
47 AT5G54970 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G26960.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.59 0.31 -0.3
48 AT3G01770 bromodomain and extraterminal domain protein 10 bromodomain and extraterminal
domain protein 10, bromodomain and
extraterminal domain protein 10		 0.59 0.31 -0.31
49 AT5G27950 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.59 0.32 -0.31
50 AT1G64220 translocase of outer membrane 7 kDa subunit 2 translocase of outer membrane 7
kDa subunit 2		 -0.59 0.31 -0.32
51 AT4G22320 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G55210.1); Has 8953 Blast hits
to 5363 proteins in 542 species: Archae - 33; Bacteria -
806; Metazoa - 2454; Fungi - 831; Plants - 279; Viruses -
151; Other Eukaryotes - 4399 (source: NCBI BLink).		 -0.59 0.31 -0.33
52 AT1G65290 mitochondrial acyl carrier protein 2 mitochondrial acyl carrier protein
2		 -0.58 0.31 -0.31
53 AT3G20810 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 Jumonji C domain-containing
protein 30, jumonji domain
containing 5		 0.58 0.31 -0.32
54 AT5G05750 DNAJ heat shock N-terminal domain-containing protein -0.58 0.31 -0.29
55 AT4G35770 Rhodanese/Cell cycle control phosphatase superfamily
protein		 ARABIDOPSIS THALIANA SENESCENCE 1,
DARK INDUCIBLE 1, SENESCENCE 1,
SENESCENCE ASSOCIATED GENE 1		 0.58 0.31 -0.31
56 AT1G52280 RAB GTPase homolog G3D RAB GTPase homolog G3D, RAB GTPase
homolog G3D		 -0.58 0.32 -0.33
57 AT3G22240 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G22235.2); Has 177 Blast hits
to 177 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 177; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.58 0.31 -0.32
58 AT5G57220 cytochrome P450, family 81, subfamily F, polypeptide 2 cytochrome P450, family 81,
subfamily F, polypeptide 2		 -0.58 0.31 -0.34
59 AT1G01770 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1446 (InterPro:IPR010839); Has 1597
Blast hits to 1509 proteins in 306 species: Archae - 4;
Bacteria - 843; Metazoa - 22; Fungi - 131; Plants - 31;
Viruses - 0; Other Eukaryotes - 566 (source: NCBI BLink).		 0.58 0.3 -0.31
60 AT1G55450 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.57 0.32 -0.31
61 AT1G01530 AGAMOUS-like 28 AGAMOUS-like 28 -0.57 0.3 -0.33
62 AT1G13560 aminoalcoholphosphotransferase 1 aminoalcoholphosphotransferase 1,
ATAAPT1		 -0.57 0.32 -0.33
63 AT1G78460 SOUL heme-binding family protein -0.57 0.29 -0.32
64 AT4G33310 unknown protein; Has 5 Blast hits to 5 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.57 0.31 -0.3
65 AT4G09420 Disease resistance protein (TIR-NBS class) -0.57 0.32 -0.3
66 AT5G19930 Protein of unknown function DUF92, transmembrane -0.57 0.31 -0.32
67 AT1G32300 D-arabinono-1,4-lactone oxidase family protein -0.57 0.31 -0.31
68 AT2G18280 tubby like protein 2 tubby like protein 2, tubby like
protein 2		 0.57 0.31 -0.33
69 AT5G16320 FRIGIDA like 1 FRIGIDA like 1 -0.56 0.31 -0.34
70 AT1G61730 DNA-binding storekeeper protein-related transcriptional
regulator		 -0.56 0.3 -0.33
71 AT5G27990 Pre-rRNA-processing protein TSR2, conserved region -0.56 0.3 -0.32
72 AT2G25930 hydroxyproline-rich glycoprotein family protein EARLY FLOWERING 3, PYK20 0.56 0.31 -0.33
73 AT1G31650 RHO guanyl-nucleotide exchange factor 14 ATROPGEF14, RHO guanyl-nucleotide
exchange factor 14		 0.56 0.3 -0.33
74 AT4G23220 cysteine-rich RLK (RECEPTOR-like protein kinase) 14 cysteine-rich RLK (RECEPTOR-like
protein kinase) 14		 -0.56 0.32 -0.31
75 AT4G35780 ACT-like protein tyrosine kinase family protein serine/threonine/tyrosine kinase
17		 0.55 0.32 -0.32
76 AT3G53880 NAD(P)-linked oxidoreductase superfamily protein Aldo-keto reductase family 4
member C11		 -0.55 0.3 -0.31
77 AT1G50290 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.55 0.32 -0.31
78 AT3G07090 PPPDE putative thiol peptidase family protein -0.55 0.32 -0.31
79 AT1G23880 NHL domain-containing protein 0.55 0.31 -0.33
80 AT5G64280 dicarboxylate transporter 2.2 dicarboxylate transporter 2.2 0.55 0.29 -0.31
81 AT4G00335 RING-H2 finger B1A RING-H2 finger B1A 0.55 0.31 -0.32
82 AT5G15980 Pentatricopeptide repeat (PPR) superfamily protein -0.55 0.34 -0.28
83 AT5G05550 sequence-specific DNA binding transcription factors 0.55 0.33 -0.32
84 AT1G48310 chromatin remodeling factor18 CHA18, chromatin remodeling
factor18		 0.54 0.3 -0.29
85 AT5G05890 UDP-Glycosyltransferase superfamily protein -0.54 0.33 -0.31
86 AT5G05710 Pleckstrin homology (PH) domain superfamily protein 0.54 0.32 -0.32
87 AT4G25780 CAP (Cysteine-rich secretory proteins, Antigen 5, and
Pathogenesis-related 1 protein) superfamily protein		 0.54 0.33 -0.31
88 AT5G66380 folate transporter 1 folate transporter 1, folate
transporter 1		 0.54 0.32 -0.31
89 AT1G54120 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G14060.1); Has 23 Blast hits
to 23 proteins in 7 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.54 0.31 -0.3
90 AT1G61870 pentatricopeptide repeat 336 pentatricopeptide repeat 336 -0.54 0.31 -0.31
91 AT1G04950 TATA BOX ASSOCIATED FACTOR II 59 ATTAF6, EMBRYO DEFECTIVE 2781,
TBP-associated factor 6, TATA BOX
ASSOCIATED FACTOR II 59		 0.54 0.34 -0.31
92 AT4G27050 F-box/RNI-like superfamily protein 0.54 0.34 -0.3
93 AT1G59900 pyruvate dehydrogenase complex E1 alpha subunit pyruvate dehydrogenase complex E1
alpha subunit, pyruvate
dehydrogenase complex E1 alpha
subunit		 -0.53 0.31 -0.32
94 AT4G29050 Concanavalin A-like lectin protein kinase family protein -0.53 0.32 -0.3
95 AT2G22520 unknown protein; Has 186 Blast hits to 37 proteins in 16
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4;
Plants - 17; Viruses - 0; Other Eukaryotes - 165 (source:
NCBI BLink).		 -0.53 0.32 -0.31
96 AT4G25020 D111/G-patch domain-containing protein -0.53 0.33 -0.31
97 AT4G14695 Uncharacterised protein family (UPF0041) -0.53 0.32 -0.31
98 AT1G63350 Disease resistance protein (CC-NBS-LRR class) family -0.53 0.32 -0.32
99 AT1G63880 Disease resistance protein (TIR-NBS-LRR class) family -0.52 0.32 -0.32
100 AT3G55940 Phosphoinositide-specific phospholipase C family protein -0.52 0.32 -0.31
101 AT5G23230 nicotinamidase 2 nicotinamidase 2 -0.52 0.31 -0.31
102 AT1G67470 Protein kinase superfamily protein -0.52 0.29 -0.29
103 AT5G23760 Copper transport protein family -0.52 0.3 -0.33
104 AT4G05450 mitochondrial ferredoxin 1 ARABIDOPSIS MITOCHONDRIAL
FERREDOXIN 1, mitochondrial
ferredoxin 1		 -0.52 0.32 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
105 C0038 5-(Methylthio)pentylglucosinolate - 5-Methylthiopentylglucosinolate glucosinolate biosynthesis from trihomomethionine -0.82 0.43 -0.44 C0038
106 C0033 4-(Methylsulfinyl)butylglucosinolate - 4-Methylsulfinylbutyl glucosinolate glucosinolate biosynthesis from dihomomethionine -0.81 0.45 -0.48 C0033
107 C0183 MST_3033.1 - - - -0.72 0.46 -0.47
108 C0178 MST_2446.7 - - - 0.7 0.45 -0.47
109 C0124 Isonicotinic acid - - - 0.63 0.43 -0.42
110 C0034 4-Methylthio-n-butylglucosinolate - 4-Methylthiobutyl glucosinolate glucosinolate biosynthesis from dihomomethionine -0.63 0.31 -0.29 C0034