AGICode | AT4G33210 |
Description | F-box family protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT4G33210 | F-box family protein | SLOW MOTION | 1 | 0.3 | -0.3 | ||
2 | AT3G07274 | unknown pseudogene | 0.79 | 0.32 | -0.31 | |||
3 | AT3G50380 | Protein of unknown function (DUF1162) | 0.75 | 0.32 | -0.33 | |||
4 | AT2G39340 | SAC3/GANP/Nin1/mts3/eIF-3 p25 family | AtSAC3A, yeast Sac3 homolog A | 0.75 | 0.31 | -0.32 | ||
5 | AT5G20840 | Phosphoinositide phosphatase family protein | 0.74 | 0.33 | -0.34 | |||
6 | AT4G17140 | pleckstrin homology (PH) domain-containing protein | 0.73 | 0.32 | -0.31 | |||
7 | ATCG00770 | ribosomal protein S8 | ribosomal protein S8 | 0.73 | 0.32 | -0.3 | ||
8 | AT3G27870 | ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein |
0.73 | 0.3 | -0.3 | |||
9 | AT4G11110 | SPA1-related 2 | SPA1-related 2 | 0.72 | 0.31 | -0.31 | ||
10 | AT5G55390 | ENHANCED DOWNY MILDEW 2 | ENHANCED DOWNY MILDEW 2 | 0.72 | 0.32 | -0.33 | ||
11 | AT4G38600 | HEAT repeat ;HECT-domain (ubiquitin-transferase) | KAKTUS, UBIQUITIN-PROTEIN LIGASE 3 | 0.72 | 0.33 | -0.32 | ||
12 | AT1G32810 | RING/FYVE/PHD zinc finger superfamily protein | 0.72 | 0.29 | -0.33 | |||
13 | AT4G28260 | unknown protein; Has 50 Blast hits to 42 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.72 | 0.3 | -0.3 | |||
14 | AT2G47410 | WD40/YVTN repeat-like-containing domain;Bromodomain | 0.71 | 0.3 | -0.34 | |||
15 | AT3G27260 | global transcription factor group E8 | global transcription factor group E8 |
0.71 | 0.28 | -0.32 | ||
16 | AT1G74030 | enolase 1 | enolase 1 | -0.71 | 0.32 | -0.31 | ||
17 | AT4G25970 | phosphatidylserine decarboxylase 3 | phosphatidylserine decarboxylase 3 | 0.71 | 0.29 | -0.35 | ||
18 | AT3G22380 | time for coffee | TIME FOR COFFEE | 0.71 | 0.3 | -0.3 | ||
19 | AT3G06670 | binding | 0.7 | 0.32 | -0.32 | |||
20 | AT1G13910 | Leucine-rich repeat (LRR) family protein | 0.7 | 0.29 | -0.34 | |||
21 | AT3G47980 | Integral membrane HPP family protein | -0.7 | 0.32 | -0.33 | |||
22 | AT3G50140 | Plant protein of unknown function (DUF247) | -0.7 | 0.31 | -0.31 | |||
23 | AT1G27630 | cyclin T 1;3 | cyclin T 1;3 | 0.7 | 0.3 | -0.33 | ||
24 | AT5G18475 | Pentatricopeptide repeat (PPR) superfamily protein | 0.7 | 0.29 | -0.31 | |||
25 | AT2G19760 | profilin 1 | PROFILIN 1, profilin 1 | -0.69 | 0.31 | -0.3 | ||
26 | AT3G43810 | calmodulin 7 | calmodulin 7 | -0.69 | 0.32 | -0.3 | ||
27 | AT5G35180 | Protein of unknown function (DUF1336) | 0.69 | 0.31 | -0.31 | |||
28 | AT5G40340 | Tudor/PWWP/MBT superfamily protein | 0.68 | 0.32 | -0.33 | |||
29 | AT2G37520 | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain |
0.68 | 0.3 | -0.3 | |||
30 | AT1G05380 | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein |
0.68 | 0.33 | -0.32 | |||
31 | AT1G24706 | THO2 | AtTHO2, EMBRYO DEFECTIVE 2793, THO2 |
0.68 | 0.31 | -0.31 | ||
32 | AT3G08850 | HEAT repeat ;WD domain, G-beta repeat protein protein | ATRAPTOR1B, RAPTOR1, RAPTOR1B | 0.68 | 0.32 | -0.31 | ||
33 | AT1G28570 | SGNH hydrolase-type esterase superfamily protein | 0.68 | 0.31 | -0.33 | |||
34 | AT5G18190 | Protein kinase family protein | 0.68 | 0.33 | -0.31 | |||
35 | AT2G25730 | unknown protein; Has 157 Blast hits to 144 proteins in 62 species: Archae - 0; Bacteria - 0; Metazoa - 101; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). |
0.68 | 0.31 | -0.31 | |||
36 | AT2G31110 | Plant protein of unknown function (DUF828) | TRICHOME BIREFRINGENCE-LIKE 40 | -0.68 | 0.33 | -0.3 | ||
37 | AT5G26570 | catalytics;carbohydrate kinases;phosphoglucan, water dikinases |
ATGWD3, OK1, PHOSPHOGLUCAN WATER DIKINASE |
0.68 | 0.33 | -0.32 | ||
38 | AT1G58220 | Homeodomain-like superfamily protein | 0.68 | 0.32 | -0.3 | |||
39 | AT1G05205 | unknown protein; Has 44 Blast hits to 44 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.68 | 0.34 | -0.32 | |||
40 | AT5G65620 | Zincin-like metalloproteases family protein | 0.68 | 0.3 | -0.32 | |||
41 | AT1G17440 | Transcription initiation factor TFIID subunit A | CYTOKININ-HYPERSENSITIVE 1, ENHANCED ETHYLENE RESPONSE 4, TBP-ASSOCIATED FACTOR 12B |
0.67 | 0.33 | -0.3 | ||
42 | AT3G02850 | STELAR K+ outward rectifier | STELAR K+ outward rectifier | -0.67 | 0.32 | -0.33 | ||
43 | AT4G32620 | Enhancer of polycomb-like transcription factor protein | 0.67 | 0.31 | -0.33 | |||
44 | ATCG00530 | CemA-like proton extrusion protein-related | YCF10 | 0.67 | 0.33 | -0.32 | ||
45 | AT1G67310 | Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains |
0.67 | 0.3 | -0.32 | |||
46 | AT5G11700 | LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT4G32920.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.67 | 0.32 | -0.33 | |||
47 | AT5G23450 | long-chain base (LCB) kinase 1 | long-chain base (LCB) kinase 1, long-chain base (LCB) kinase 1 |
0.67 | 0.31 | -0.32 | ||
48 | AT5G61340 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G26650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.67 | 0.3 | -0.33 | |||
49 | AT4G34040 | RING/U-box superfamily protein | 0.67 | 0.33 | -0.29 | |||
50 | AT2G29560 | cytosolic enolase | cytosolic enolase | -0.67 | 0.32 | -0.33 | ||
51 | AT5G11540 | D-arabinono-1,4-lactone oxidase family protein | -0.66 | 0.33 | -0.32 | |||
52 | ATCG00740 | RNA polymerase subunit alpha | RNA polymerase subunit alpha | 0.66 | 0.32 | -0.33 | ||
53 | AT3G05030 | sodium hydrogen exchanger 2 | ATNHX2, sodium hydrogen exchanger 2 |
0.66 | 0.31 | -0.31 | ||
54 | AT4G02810 | Protein of unknown function (DUF3049) | FANTASTIC FOUR 1 | -0.66 | 0.33 | -0.32 | ||
55 | AT3G09300 | OSBP(oxysterol binding protein)-related protein 3B | OSBP(oxysterol binding protein)-related protein 3B |
-0.66 | 0.32 | -0.32 | ||
56 | AT5G53440 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.66 | 0.3 | -0.33 | |||
57 | AT2G27490 | dephospho-CoA kinase family | ATCOAE | 0.65 | 0.32 | -0.33 | ||
58 | AT3G09850 | D111/G-patch domain-containing protein | 0.65 | 0.32 | -0.31 | |||
59 | AT1G79950 | RAD3-like DNA-binding helicase protein | 0.65 | 0.29 | -0.32 | |||
60 | AT2G29190 | pumilio 2 | pumilio 2, pumilio 2 | 0.65 | 0.29 | -0.31 | ||
61 | AT5G16520 | unknown protein; Has 25 Blast hits to 25 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.65 | 0.33 | -0.3 | |||
62 | AT1G55160 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plastid; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G19530.1); Has 63 Blast hits to 63 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.65 | 0.32 | -0.3 | |||
63 | AT3G60030 | squamosa promoter-binding protein-like 12 | squamosa promoter-binding protein-like 12 |
0.65 | 0.32 | -0.31 | ||
64 | AT2G17930 | Phosphatidylinositol 3- and 4-kinase family protein with FAT domain |
0.65 | 0.3 | -0.29 | |||
65 | AT5G01290 | mRNA capping enzyme family protein | 0.65 | 0.33 | -0.32 | |||
66 | AT1G01040 | dicer-like 1 | ABNORMAL SUSPENSOR 1, DICER-LIKE 1, CARPEL FACTORY, dicer-like 1, EMBRYO DEFECTIVE 60, EMBRYO DEFECTIVE 76, SHORT INTEGUMENTS 1, SUSPENSOR 1 |
0.65 | 0.32 | -0.32 | ||
67 | AT1G80460 | Actin-like ATPase superfamily protein | GLI1, nonhost resistance to P. s. phaseolicola 1 |
-0.65 | 0.32 | -0.31 | ||
68 | AT1G19360 | Nucleotide-diphospho-sugar transferase family protein | reduced residual arabinose 3 | -0.64 | 0.31 | -0.31 | ||
69 | ATCG00750 | ribosomal protein S11 | ribosomal protein S11 | 0.64 | 0.32 | -0.29 | ||
70 | AT5G24740 | Protein of unknown function (DUF1162) | 0.64 | 0.31 | -0.31 | |||
71 | ATCG00540 | photosynthetic electron transfer A | photosynthetic electron transfer A | 0.64 | 0.33 | -0.3 | ||
72 | AT1G14660 | Na+/H+ exchanger 8 | Na+/H+ exchanger 8, Na+/H+ exchanger 8, SODIUM HYDROGEN EXCHANGER 8 |
0.64 | 0.34 | -0.32 | ||
73 | AT2G22475 | GRAM domain family protein | GL2-EXPRESSION MODULATOR | -0.64 | 0.31 | -0.32 | ||
74 | AT1G09230 | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.64 | 0.32 | -0.33 | |||
75 | AT5G44150 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). |
0.63 | 0.28 | -0.31 | |||
76 | AT1G22870 | Protein kinase family protein with ARM repeat domain | 0.63 | 0.32 | -0.32 | |||
77 | AT1G17145 | RING/U-box superfamily protein | 0.63 | 0.33 | -0.29 | |||
78 | AT4G38680 | glycine rich protein 2 | ARABIDOPSIS THALIANA COLD SHOCK PROTEIN 2, COLD SHOCK DOMAIN PROTEIN 2, COLD SHOCK PROTEIN 2, glycine rich protein 2 |
-0.63 | 0.31 | -0.31 | ||
79 | AT5G13690 | alpha-N-acetylglucosaminidase family / NAGLU family | CYCLOPS 1, N-ACETYL-GLUCOSAMINIDASE |
0.63 | 0.31 | -0.3 | ||
80 | AT4G27270 | Quinone reductase family protein | -0.63 | 0.33 | -0.33 | |||
81 | AT2G35210 | root and pollen arfgap | AGD10, MATERNAL EFFECT EMBRYO ARREST 28, root and pollen arfgap |
-0.63 | 0.33 | -0.3 | ||
82 | AT3G05020 | acyl carrier protein 1 | ACYL CARRIER PROTEIN, acyl carrier protein 1 |
-0.63 | 0.33 | -0.32 | ||
83 | AT4G24480 | Protein kinase superfamily protein | 0.63 | 0.35 | -0.33 | |||
84 | AT1G70990 | proline-rich family protein | -0.63 | 0.32 | -0.31 | |||
85 | AT3G14720 | MAP kinase 19 | ARABIDOPSIS THALIANA MAP KINASE 19, MAP kinase 19 |
0.63 | 0.29 | -0.31 | ||
86 | AT3G50350 | Protein of unknown function (DUF1685) | -0.63 | 0.29 | -0.34 | |||
87 | AT3G01310 | Phosphoglycerate mutase-like family protein | 0.63 | 0.33 | -0.34 | |||
88 | AT5G18550 | Zinc finger C-x8-C-x5-C-x3-H type family protein | 0.63 | 0.32 | -0.3 | |||
89 | AT5G58040 | homolog of yeast FIP1 [V] | homolog of yeast FIP1 [V], ATFIPS5, homolog of yeast FIP1 [V], FIPS5 |
0.63 | 0.3 | -0.3 | ||
90 | AT5G60950 | COBRA-like protein 5 precursor | COBRA-like protein 5 precursor | -0.62 | 0.33 | -0.31 | ||
91 | AT4G18130 | phytochrome E | phytochrome E | 0.62 | 0.32 | -0.31 | ||
92 | AT1G10570 | Cysteine proteinases superfamily protein | OVERLY TOLERANT TO SALT 2, UB-LIKE PROTEASE 1C |
0.62 | 0.31 | -0.34 | ||
93 | AT3G14640 | cytochrome P450, family 72, subfamily A, polypeptide 10 | cytochrome P450, family 72, subfamily A, polypeptide 10 |
0.62 | 0.31 | -0.32 | ||
94 | AT5G22760 | PHD finger family protein | 0.62 | 0.33 | -0.3 | |||
95 | AT1G34770 | CONTAINS InterPro DOMAIN/s: MAGE protein (InterPro:IPR002190); Has 1274 Blast hits to 1260 proteins in 85 species: Archae - 0; Bacteria - 0; Metazoa - 1104; Fungi - 45; Plants - 49; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). |
-0.62 | 0.29 | -0.31 | |||
96 | AT3G08020 | PHD finger family protein | 0.62 | 0.33 | -0.32 | |||
97 | AT1G03060 | Beige/BEACH domain ;WD domain, G-beta repeat protein | SPIRRIG | 0.62 | 0.31 | -0.32 | ||
98 | AT3G22170 | far-red elongated hypocotyls 3 | far-red elongated hypocotyls 3 | 0.62 | 0.33 | -0.31 | ||
99 | AT5G43310 | COP1-interacting protein-related | 0.62 | 0.32 | -0.29 | |||
100 | AT2G25850 | poly(A) polymerase 2 | poly(A) polymerase 2 | 0.61 | 0.31 | -0.3 | ||
101 | AT3G14980 | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein |
0.61 | 0.29 | -0.32 | |||
102 | AT3G63180 | TIC-like | TICKLE, TIC-like | 0.61 | 0.33 | -0.3 | ||
103 | AT5G43930 | Transducin family protein / WD-40 repeat family protein | 0.61 | 0.33 | -0.3 | |||
104 | AT5G42920 | THO complex, subunit 5 | AtTHO5, THO5 | 0.61 | 0.31 | -0.31 | ||
105 | AT3G06400 | chromatin-remodeling protein 11 | chromatin-remodeling protein 11 | 0.61 | 0.33 | -0.33 | ||
106 | AT3G63000 | NPL4-like protein 1 | NPL4-like protein 1 | 0.61 | 0.31 | -0.33 | ||
107 | AT5G24970 | Protein kinase superfamily protein | 0.61 | 0.31 | -0.32 | |||
108 | AT2G20620 | Protein of unknown function (DUF626) | -0.61 | 0.35 | -0.32 | |||
109 | AT4G31410 | Protein of unknown function (DUF1644) | 0.61 | 0.33 | -0.3 | |||
110 | AT2G46020 | transcription regulatory protein SNF2, putative | ARABIDOPSIS THALIANA BRAHMA, BRAHMA, CHA2, CHROMATIN REMODELING 2 |
0.61 | 0.34 | -0.31 | ||
111 | AT5G66320 | GATA transcription factor 5 | GATA transcription factor 5 | 0.61 | 0.31 | -0.32 | ||
112 | AT4G17190 | farnesyl diphosphate synthase 2 | farnesyl diphosphate synthase 2 | -0.61 | 0.33 | -0.31 | ||
113 | AT1G24190 | SIN3-like 3 | ARABIDOPSIS THALIANA SIN3 HOMOLOG, ARABIDOPSIS THALIANA SIN3 HOMOLOG, SIN3-like 3 |
0.61 | 0.32 | -0.31 | ||
114 | ATCG00510 | photsystem I subunit I | photsystem I subunit I | 0.61 | 0.31 | -0.31 | ||
115 | AT4G15475 | F-box/RNI-like superfamily protein | 0.61 | 0.31 | -0.31 | |||
116 | AT4G14600 | Target SNARE coiled-coil domain protein | -0.6 | 0.31 | -0.3 | |||
117 | AT3G54770 | RNA-binding (RRM/RBD/RNP motifs) family protein | -0.6 | 0.32 | -0.32 | |||
118 | AT5G08160 | serine/threonine protein kinase 3 | serine/threonine protein kinase 3, serine/threonine protein kinase 3 |
-0.6 | 0.31 | -0.32 | ||
119 | AT2G26240 | Transmembrane proteins 14C | -0.6 | 0.31 | -0.31 | |||
120 | AT1G13950 | eukaryotic elongation factor 5A-1 | EUKARYOTIC ELONGATION FACTOR 5A-1, EIF-5A, EUKARYOTIC ELONGATION FACTOR 5A, eukaryotic elongation factor 5A-1 |
-0.6 | 0.34 | -0.33 | ||
121 | AT2G27970 | CDK-subunit 2 | CDK-subunit 2 | -0.6 | 0.31 | -0.33 | ||
122 | AT3G29010 | Biotin/lipoate A/B protein ligase family | -0.6 | 0.31 | -0.32 | |||
123 | AT3G28380 | P-glycoprotein 17 | ATP-binding cassette B17, P-glycoprotein 17 |
-0.59 | 0.33 | -0.31 | ||
124 | AT2G04650 | ADP-glucose pyrophosphorylase family protein | -0.59 | 0.32 | -0.31 | |||
125 | AT1G60350 | NAC domain containing protein 24 | NAC domain containing protein 24, NAC domain containing protein 24 |
-0.59 | 0.31 | -0.33 | ||
126 | AT5G20950 | Glycosyl hydrolase family protein | -0.59 | 0.32 | -0.33 | |||
127 | AT2G15860 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.59 | 0.35 | -0.29 | |||
128 | AT5G24580 | Heavy metal transport/detoxification superfamily protein | -0.59 | 0.34 | -0.31 | |||
129 | AT5G23730 | Transducin/WD40 repeat-like superfamily protein | EARLY FLOWERING BY OVEREXPRESSION 2, REPRESSOR OF UV-B PHOTOMORPHOGENESIS 2 |
-0.58 | 0.33 | -0.33 | ||
130 | AT4G22790 | MATE efflux family protein | -0.58 | 0.31 | -0.3 | |||
131 | AT5G40320 | Cysteine/Histidine-rich C1 domain family protein | -0.57 | 0.31 | -0.32 | |||
132 | AT3G04800 | translocase inner membrane subunit 23-3 | translocase inner membrane subunit 23-3, translocase inner membrane subunit 23-3 |
-0.57 | 0.31 | -0.32 | ||
133 | AT1G36940 | unknown protein; Has 21 Blast hits to 21 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.57 | 0.34 | -0.31 | |||
134 | AT5G10430 | arabinogalactan protein 4 | arabinogalactan protein 4, ATAGP4 | -0.57 | 0.31 | -0.3 | ||
135 | AT3G32060 | transposable element gene | -0.57 | 0.32 | -0.33 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
136 | C0003 | α-Tocopherol | - | alpha-Tocopherol | vitamin E biosynthesis | 0.74 | 0.44 | -0.48 | ||
137 | C0193 | Pantothenic acid | D,L-Pantothenic acid | Pantothenate | pantothenate biosynthesis | 0.72 | 0.44 | -0.43 |