AT4G31610 : REPRODUCTIVE MERISTEM 1
Query Information
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AGICode AT4G31610
Description Transcriptional factor B3 family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G31610 Transcriptional factor B3 family protein REPRODUCTIVE MERISTEM 1,
REPRODUCTIVE MERISTEM 1		 1 0.32 -0.3
2 AT3G42690 transposable element gene 0.71 0.3 -0.31
3 AT5G35880 transposable element gene -0.67 0.32 -0.34
4 AT4G11480 cysteine-rich RLK (RECEPTOR-like protein kinase) 32 cysteine-rich RLK (RECEPTOR-like
protein kinase) 32		 0.66 0.33 -0.31
5 AT1G24060 unknown protein; Has 7 Blast hits to 7 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.66 0.34 -0.3
6 AT5G40520 unknown protein; Has 3679 Blast hits to 2474 proteins in
390 species: Archae - 10; Bacteria - 571; Metazoa - 1012;
Fungi - 528; Plants - 214; Viruses - 74; Other Eukaryotes -
1270 (source: NCBI BLink).		 0.66 0.32 -0.32
7 AT4G09540 transposable element gene -0.65 0.31 -0.3
8 AT2G20880 Integrase-type DNA-binding superfamily protein AtERF53, ERF domain 53 0.64 0.33 -0.31
9 AT3G32110 transposable element gene 0.64 0.34 -0.34
10 AT5G14470 GHMP kinase family protein -0.63 0.34 -0.32
11 AT5G51090 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.63 0.3 -0.32
12 AT3G47630 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Mitochondrial matrix Mmp37 (InterPro:IPR015222); Has 325
Blast hits to 325 proteins in 172 species: Archae - 0;
Bacteria - 0; Metazoa - 109; Fungi - 140; Plants - 43;
Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink).		 -0.62 0.32 -0.34
13 AT5G07480 KAR-UP oxidoreductase 1 KAR-UP oxidoreductase 1 0.62 0.32 -0.34
14 AT5G20170 RNA polymerase II transcription mediators 0.62 0.3 -0.32
15 AT3G43150 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G11010.1); Has 34 Blast hits
to 32 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.62 0.29 -0.33
16 AT3G45630 RNA binding (RRM/RBD/RNP motifs) family protein 0.61 0.31 -0.33
17 AT3G61390 RING/U-box superfamily protein 0.61 0.33 -0.31
18 AT1G36600 transposable element gene 0.61 0.33 -0.29
19 AT2G43150 Proline-rich extensin-like family protein 0.61 0.31 -0.3
20 AT1G26350 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.6 0.32 -0.3
21 AT3G48960 Ribosomal protein L13e family protein 0.6 0.31 -0.33
22 AT3G09130 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G42786.1); Has 7 Blast hits to
7 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.6 0.32 -0.32
23 AT4G15350 cytochrome P450, family 705, subfamily A, polypeptide 2 cytochrome P450, family 705,
subfamily A, polypeptide 2		 0.6 0.36 -0.31
24 AT1G13070 putative cytochrome P450 cytochrome P450, family 71,
subfamily B, polypeptide 27		 0.6 0.33 -0.32
25 AT4G07330 transposable element gene 0.6 0.3 -0.32
26 AT1G72500 LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: von Willebrand factor, type A
(InterPro:IPR002035); BEST Arabidopsis thaliana protein
match is: inter-alpha-trypsin inhibitor heavy chain-related
(TAIR:AT1G19110.1); Has 1407 Blast hits to 1406 proteins in
307 species: Archae - 6; Bacteria - 522; Metazoa - 484;
Fungi - 59; Plants - 110; Viruses - 0; Other Eukaryotes -
226 (source: NCBI BLink).		 0.6 0.29 -0.33
27 AT1G05990 EF hand calcium-binding protein family ROOT HAIR SPECIFIC 1 -0.59 0.31 -0.27
28 AT3G18100 myb domain protein 4r1 myb domain protein 4R1, myb domain
protein 4r1		 0.59 0.32 -0.31
29 AT1G19710 UDP-Glycosyltransferase superfamily protein 0.59 0.32 -0.3
30 AT4G33290 F-box and associated interaction domains-containing protein 0.59 0.32 -0.33
31 AT5G03400 unknown protein; Has 48 Blast hits to 48 proteins in 14
species: Archae - 0; Bacteria - 0; Metazoa - 23; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 19 (source:
NCBI BLink).		 0.58 0.33 -0.31
32 AT2G19630 F-box and associated interaction domains-containing protein 0.58 0.32 -0.3
33 AT5G17070 CONTAINS InterPro DOMAIN/s: Protein phosphatase 4 core
regulatory subunit R2 (InterPro:IPR015267); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.58 0.32 -0.3
34 AT2G24255 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF295 (InterPro:IPR005174); BEST
Arabidopsis thaliana protein match is: Protein of unknown
function (DUF295) (TAIR:AT1G64840.1); Has 124 Blast hits to
121 proteins in 7 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 124; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.58 0.34 -0.3
35 AT3G30190 transposable element gene 0.58 0.32 -0.32
36 AT5G02570 Histone superfamily protein 0.58 0.3 -0.28
37 AT4G27300 S-locus lectin protein kinase family protein 0.57 0.32 -0.32
38 AT3G63230 Protein of unknown function (DUF581) -0.57 0.3 -0.33
39 AT3G08560 vacuolar H+-ATPase subunit E isoform 2 vacuolar H+-ATPase subunit E
isoform 2		 0.57 0.31 -0.32
40 AT5G38760 Late embryogenesis abundant protein (LEA) family protein 0.57 0.31 -0.32
41 AT1G49850 RING/U-box superfamily protein -0.57 0.3 -0.31
42 AT1G01410 pumilio 22 pumilio 22, pumilio 22 0.57 0.31 -0.31
43 AT3G04990 BEST Arabidopsis thaliana protein match is: Frigida-like
protein (TAIR:AT5G27220.1); Has 30900 Blast hits to 17560
proteins in 1427 species: Archae - 757; Bacteria - 4112;
Metazoa - 14311; Fungi - 2221; Plants - 1348; Viruses - 71;
Other Eukaryotes - 8080 (source: NCBI BLink).		 0.57 0.3 -0.33
44 AT1G29600 Zinc finger C-x8-C-x5-C-x3-H type family protein -0.57 0.29 -0.31
45 AT3G12850 COP9 signalosome complex-related / CSN complex-related 0.56 0.31 -0.31
46 AT3G51910 heat shock transcription factor A7A ARABIDOPSIS THALIANA HEAT SHOCK
TRANSCRIPTION FACTOR A7A, heat
shock transcription factor A7A		 -0.56 0.31 -0.32
47 AT1G24110 Peroxidase superfamily protein 0.56 0.33 -0.31
48 AT2G03740 late embryogenesis abundant domain-containing protein / LEA
domain-containing protein		 0.56 0.3 -0.3
49 AT5G07150 Leucine-rich repeat protein kinase family protein 0.56 0.32 -0.31
50 AT1G09150 pseudouridine synthase and archaeosine transglycosylase
(PUA) domain-containing protein		 -0.56 0.31 -0.29
51 AT2G32050 Family of unknown function (DUF572) 0.56 0.31 -0.32
52 AT1G32000 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT5G38190.1); Has 14 Blast hits to 14
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 14; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.55 0.32 -0.32
53 AT4G08190 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.55 0.32 -0.3
54 AT1G66120 AMP-dependent synthetase and ligase family protein 0.55 0.31 -0.34
55 AT1G71450 Integrase-type DNA-binding superfamily protein 0.55 0.34 -0.29
56 AT2G44730 Alcohol dehydrogenase transcription factor Myb/SANT-like
family protein		 -0.55 0.31 -0.32
57 AT5G02990 Galactose oxidase/kelch repeat superfamily protein 0.55 0.3 -0.32
58 AT2G19600 K+ efflux antiporter 4 K+ efflux antiporter 4, KEA4, K+
efflux antiporter 4		 0.55 0.31 -0.33
59 AT4G02900 ERD (early-responsive to dehydration stress) family protein 0.55 0.3 -0.31
60 AT2G26120 glycine-rich protein 0.55 0.32 -0.29
61 AT4G27290 S-locus lectin protein kinase family protein 0.55 0.32 -0.32
62 AT5G63320 nuclear protein X1 nuclear protein X1 0.54 0.32 -0.31
63 AT2G29880 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G27260.1); Has 260 Blast hits
to 212 proteins in 20 species: Archae - 0; Bacteria - 0;
Metazoa - 1; Fungi - 10; Plants - 240; Viruses - 0; Other
Eukaryotes - 9 (source: NCBI BLink).		 0.54 0.3 -0.32
64 AT5G46295 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G06475.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.54 0.33 -0.32
65 AT5G65630 global transcription factor group E7 global transcription factor group
E7		 0.54 0.33 -0.3
66 AT1G05450 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.54 0.33 -0.31
67 AT3G05830 Encodes alpha-helical IF (intermediate filament)-like
protein.		 0.54 0.29 -0.33
68 AT5G55560 Protein kinase superfamily protein 0.54 0.34 -0.31
69 AT3G27730 ATP binding;ATP-dependent helicases;DNA helicases MER3, ROCK-N-ROLLERS -0.53 0.31 -0.33
70 AT5G55350 MBOAT (membrane bound O-acyl transferase) family protein -0.53 0.31 -0.33
71 AT2G23440 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: root; Has 25 Blast hits
to 25 proteins in 6 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.52 0.31 -0.31
72 AT1G54700 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: mitochondrion;
CONTAINS InterPro DOMAIN/s: Serine endopeptidase DegP2
(InterPro:IPR015724); BEST Arabidopsis thaliana protein
match is: DegP protease 13 (TAIR:AT5G40560.1); Has 78 Blast
hits to 78 proteins in 13 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.52 0.31 -0.32
73 AT5G19360 calcium-dependent protein kinase 34 calcium-dependent protein kinase
34		 -0.52 0.32 -0.29
74 AT5G62250 microtubule-associated protein 65-9 microtubule-associated protein
65-9		 -0.51 0.3 -0.33
75 AT5G48710 Ubiquitin-like superfamily protein -0.51 0.29 -0.32
76 AT3G53150 UDP-glucosyl transferase 73D1 UDP-glucosyl transferase 73D1 -0.51 0.33 -0.31
77 AT1G14760 KNOX Arabidopsis thaliana meinox KNOX Arabidopsis thaliana meinox -0.51 0.31 -0.31
78 AT5G26100 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: male gametophyte, pollen
tube; EXPRESSED DURING: L mature pollen stage, M germinated
pollen stage; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT3G44170.1); Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.5 0.33 -0.33
79 AT5G58650 plant peptide containing sulfated tyrosine 1 plant peptide containing sulfated
tyrosine 1		 -0.5 0.32 -0.3
80 AT5G35330 methyl-CPG-binding domain protein 02 ATMBD2, methyl-CPG-binding domain
protein 02, METHYL-CPG-BINDING
DOMAIN PROTEIN 2		 -0.49 0.3 -0.32
81 AT5G38110 anti- silencing function 1b anti- silencing function 1b,
SGA01, SGA1		 -0.49 0.32 -0.32
82 AT5G46370 Ca2+ activated outward rectifying K+ channel 2 CA2+ ACTIVATED OUTWARD RECTIFYING
K+ CHANNEL 2, TANDEM PORE K+
CHANNEL 2, Ca2+ activated outward
rectifying K+ channel 2		 -0.48 0.32 -0.29
83 AT5G01150 Protein of unknown function (DUF674) -0.48 0.29 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
84 C0080 Digalactosyldiacylglycerol-34:6 - Digalactosyldiacylglycerol-34:6 triacylglycerol degradation,
linoleate biosynthesis I,
glycolipid biosynthesis,
glutathione redox reactions I 		-0.63 0.45 -0.51 C0080