AGICode | AT4G31820 |
Description | Phototropic-responsive NPH3 family protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT4G31820 | Phototropic-responsive NPH3 family protein | ENHANCER OF PINOID, MACCHI-BOU 4, NAKED PINS IN YUC MUTANTS 1 |
1 | 0.31 | -0.3 | ||
2 | AT1G24530 | Transducin/WD40 repeat-like superfamily protein | -0.73 | 0.3 | -0.31 | |||
3 | AT5G65650 | Protein of unknown function (DUF1195) | -0.73 | 0.35 | -0.31 | |||
4 | AT2G20340 | Pyridoxal phosphate (PLP)-dependent transferases superfamily protein |
0.71 | 0.32 | -0.3 | |||
5 | AT3G25970 | Pentatricopeptide repeat (PPR) superfamily protein | -0.71 | 0.32 | -0.3 | |||
6 | AT3G14230 | related to AP2 2 | related to AP2 2 | -0.7 | 0.31 | -0.31 | ||
7 | AT1G14210 | Ribonuclease T2 family protein | -0.7 | 0.32 | -0.32 | |||
8 | AT5G02610 | Ribosomal L29 family protein | -0.69 | 0.3 | -0.32 | |||
9 | AT5G13890 | Family of unknown function (DUF716) | -0.69 | 0.33 | -0.32 | |||
10 | AT5G48370 | Thioesterase/thiol ester dehydrase-isomerase superfamily protein |
0.69 | 0.3 | -0.32 | |||
11 | AT3G57300 | INO80 ortholog | INO80 ORTHOLOG, INO80 ortholog | 0.68 | 0.31 | -0.3 | ||
12 | AT5G65890 | ACT domain repeat 1 | ACT domain repeat 1 | 0.68 | 0.3 | -0.31 | ||
13 | AT3G12370 | Ribosomal protein L10 family protein | -0.68 | 0.32 | -0.31 | |||
14 | AT5G62000 | auxin response factor 2 | ARF1-BINDING PROTEIN, auxin response factor 2, HLS1 SUPPRESSOR, ORESARA 14 |
0.67 | 0.31 | -0.3 | ||
15 | AT1G61570 | translocase of the inner mitochondrial membrane 13 | translocase of the inner mitochondrial membrane 13 |
-0.67 | 0.31 | -0.32 | ||
16 | AT5G66410 | phosducin-like protein 3 homolog | phosducin-like protein 3 homolog | -0.67 | 0.31 | -0.32 | ||
17 | AT4G20840 | FAD-binding Berberine family protein | -0.67 | 0.31 | -0.32 | |||
18 | AT1G17440 | Transcription initiation factor TFIID subunit A | CYTOKININ-HYPERSENSITIVE 1, ENHANCED ETHYLENE RESPONSE 4, TBP-ASSOCIATED FACTOR 12B |
0.66 | 0.32 | -0.32 | ||
19 | AT5G55140 | ribosomal protein L30 family protein | -0.66 | 0.31 | -0.33 | |||
20 | AT1G61870 | pentatricopeptide repeat 336 | pentatricopeptide repeat 336 | -0.66 | 0.31 | -0.31 | ||
21 | AT5G08360 | Protein of unknown function (DUF789) | -0.66 | 0.31 | -0.33 | |||
22 | AT3G06790 | plastid developmental protein DAG, putative | -0.65 | 0.3 | -0.32 | |||
23 | AT5G64060 | NAC domain containing protein 103 | NAC domain containing protein 103, NAC domain containing protein 103 |
-0.65 | 0.3 | -0.3 | ||
24 | AT3G55130 | white-brown complex homolog 19 | ATP-binding cassette G19, white-brown complex homolog 19, white-brown complex homolog 19 |
0.65 | 0.33 | -0.33 | ||
25 | AT5G65880 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.65 | 0.34 | -0.31 | |||
26 | AT4G00390 | DNA-binding storekeeper protein-related transcriptional regulator |
-0.65 | 0.29 | -0.34 | |||
27 | AT3G61970 | AP2/B3-like transcriptional factor family protein | NGATHA2 | 0.65 | 0.3 | -0.32 | ||
28 | AT1G59510 | Carbohydrate-binding protein | CF9 | 0.64 | 0.29 | -0.31 | ||
29 | AT2G43680 | IQ-domain 14 | IQ-domain 14 | 0.63 | 0.33 | -0.32 | ||
30 | AT4G32760 | ENTH/VHS/GAT family protein | 0.63 | 0.29 | -0.3 | |||
31 | AT4G23670 | Polyketide cyclase/dehydrase and lipid transport superfamily protein |
0.63 | 0.33 | -0.33 | |||
32 | AT5G12980 | Cell differentiation, Rcd1-like protein | -0.63 | 0.33 | -0.34 | |||
33 | AT1G70210 | CYCLIN D1;1 | ATCYCD1;1, CYCLIN D1;1 | 0.63 | 0.34 | -0.31 | ||
34 | AT2G45440 | dihydrodipicolinate synthase | dihydrodipicolinate synthase | -0.63 | 0.33 | -0.34 | ||
35 | AT2G23610 | methyl esterase 3 | ARABIDOPSIS THALIANA METHYL ESTERASE 3, methyl esterase 3 |
-0.62 | 0.32 | -0.32 | ||
36 | AT2G29740 | UDP-glucosyl transferase 71C2 | UDP-glucosyl transferase 71C2 | -0.62 | 0.33 | -0.31 | ||
37 | AT3G53740 | Ribosomal protein L36e family protein | -0.62 | 0.3 | -0.3 | |||
38 | AT4G36020 | cold shock domain protein 1 | cold shock domain protein 1 | -0.62 | 0.32 | -0.32 | ||
39 | AT4G32440 | Plant Tudor-like RNA-binding protein | 0.62 | 0.31 | -0.32 | |||
40 | AT5G05790 | Duplicated homeodomain-like superfamily protein | -0.62 | 0.32 | -0.32 | |||
41 | AT2G17630 | Pyridoxal phosphate (PLP)-dependent transferases superfamily protein |
-0.62 | 0.32 | -0.31 | |||
42 | AT5G66080 | Protein phosphatase 2C family protein | 0.61 | 0.33 | -0.29 | |||
43 | AT3G22320 | Eukaryotic rpb5 RNA polymerase subunit family protein | ATRPABC24.3, NRPB5, NRPD5, RNA POLYMERASE II FIFTH LARGEST SUBUNIT, A |
-0.61 | 0.32 | -0.3 | ||
44 | AT3G22680 | RNA-DIRECTED DNA METHYLATION 1 | RNA-DIRECTED DNA METHYLATION 1 | -0.61 | 0.3 | -0.33 | ||
45 | AT5G08600 | U3 ribonucleoprotein (Utp) family protein | -0.61 | 0.31 | -0.31 | |||
46 | AT4G22850 | SNARE associated Golgi protein family | -0.61 | 0.31 | -0.31 | |||
47 | AT5G66320 | GATA transcription factor 5 | GATA transcription factor 5 | 0.61 | 0.31 | -0.33 | ||
48 | AT5G47550 | Cystatin/monellin superfamily protein | -0.61 | 0.3 | -0.31 | |||
49 | AT1G49660 | carboxyesterase 5 | carboxyesterase 5, carboxyesterase 5 |
-0.61 | 0.31 | -0.33 | ||
50 | AT3G02910 | AIG2-like (avirulence induced gene) family protein | -0.61 | 0.32 | -0.31 | |||
51 | AT2G40300 | ferritin 4 | ferritin 4, ferritin 4 | -0.61 | 0.3 | -0.3 | ||
52 | AT1G27340 | Galactose oxidase/kelch repeat superfamily protein | -0.6 | 0.31 | -0.31 | |||
53 | AT1G64190 | 6-phosphogluconate dehydrogenase family protein | -0.6 | 0.32 | -0.3 | |||
54 | AT3G56050 | Protein kinase family protein | 0.6 | 0.3 | -0.33 | |||
55 | AT3G27620 | alternative oxidase 1C | alternative oxidase 1C | -0.6 | 0.29 | -0.32 | ||
56 | AT1G79260 | CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1794 (InterPro:IPR014878); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.6 | 0.32 | -0.3 | |||
57 | AT1G61280 | Phosphatidylinositol N-acetylglucosaminyltransferase, GPI19/PIG-P subunit |
-0.59 | 0.31 | -0.32 | |||
58 | AT1G51860 | Leucine-rich repeat protein kinase family protein | -0.59 | 0.32 | -0.31 | |||
59 | AT3G28690 | Protein kinase superfamily protein | 0.59 | 0.32 | -0.32 | |||
60 | AT3G24760 | Galactose oxidase/kelch repeat superfamily protein | 0.59 | 0.31 | -0.33 | |||
61 | AT1G13950 | eukaryotic elongation factor 5A-1 | EUKARYOTIC ELONGATION FACTOR 5A-1, EIF-5A, EUKARYOTIC ELONGATION FACTOR 5A, eukaryotic elongation factor 5A-1 |
-0.59 | 0.34 | -0.32 | ||
62 | AT3G17920 | Outer arm dynein light chain 1 protein | 0.58 | 0.34 | -0.32 | |||
63 | AT2G24520 | H(+)-ATPase 5 | H(+)-ATPase 5, H(+)-ATPase 5 | 0.58 | 0.3 | -0.33 | ||
64 | AT1G26290 | unknown protein; Has 126 Blast hits to 112 proteins in 36 species: Archae - 0; Bacteria - 6; Metazoa - 14; Fungi - 3; Plants - 14; Viruses - 0; Other Eukaryotes - 89 (source: NCBI BLink). |
0.57 | 0.3 | -0.32 | |||
65 | AT1G54040 | epithiospecifier protein | epithiospecifier protein, EPITHIOSPECIFYING SENESCENCE REGULATOR, TASTY |
0.57 | 0.3 | -0.34 | ||
66 | AT5G02310 | proteolysis 6 | proteolysis 6 | 0.57 | 0.29 | -0.3 | ||
67 | AT4G26630 | DEK domain-containing chromatin associated protein | 0.57 | 0.32 | -0.31 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
68 | C0210 | Phytol | E-Phytol | Phytol | chlorophyll a degradation II, chlorophyll a degradation, phytol salvage pathway |
0.77 | 0.47 | -0.45 | ||
69 | C0111 | Hexa-2-O-glycerol-β-galactopyranoside | Hexa-2-O-gllycerol-β-D-galactopyranoside | - | - | 0.76 | 0.41 | -0.45 | ||
70 | C0107 | Glycine | - | Glycine | 5-aminoimidazole ribonucleotide biosynthesis I, gamma-glutamyl cycle, folate polyglutamylation, gamma-glutamyl cycle (plant pathway), glutathione biosynthesis, glutathione-mediated detoxification II, folate transformations II, indole glucosinolate breakdown (active in intact plant cell), glycine cleavage complex, camalexin biosynthesis, thiamine biosynthesis II, tRNA charging, glycine biosynthesis, glutathione degradation, photorespiration |
0.69 | 0.43 | -0.46 | ||
71 | C0109 | Guanine | - | Guanine | guanine and guanosine salvage II, guanosine nucleotides degradation II |
0.69 | 0.44 | -0.44 | ||
72 | C0031 | 3-Methylthio-n-propylglucosinolate | - | 3-Methylthiopropylglucosinolate | glucosinolate biosynthesis from homomethionine | -0.68 | 0.49 | -0.45 |