AT4G31460 : -
Query Information
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AGICode AT4G31460
Description Ribosomal L28 family
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G31460 Ribosomal L28 family 1 0.31 -0.31
2 AT5G18640 alpha/beta-Hydrolases superfamily protein -0.86 0.32 -0.35
3 AT4G11570 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.84 0.31 -0.35
4 AT5G64100 Peroxidase superfamily protein 0.83 0.31 -0.33
5 AT4G34750 SAUR-like auxin-responsive protein family 0.83 0.32 -0.31
6 AT2G40660 Nucleic acid-binding, OB-fold-like protein 0.82 0.31 -0.31
7 AT4G33040 Thioredoxin superfamily protein -0.82 0.33 -0.31
8 AT2G25625 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED
DURING: LP.06 six leaves visible, LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage; Has 24 Blast hits to 24 proteins in 9 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.81 0.32 -0.3
9 AT1G68600 Aluminium activated malate transporter family protein -0.81 0.31 -0.33
10 AT5G16070 TCP-1/cpn60 chaperonin family protein 0.81 0.33 -0.32
11 AT1G26910 Ribosomal protein L16p/L10e family protein ribosomal protein L10 B 0.81 0.34 -0.29
12 AT2G28600 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.79 0.3 -0.3
13 AT3G44590 60S acidic ribosomal protein family 0.79 0.32 -0.34
14 AT3G61960 Protein kinase superfamily protein -0.79 0.31 -0.31
15 AT1G20950 Phosphofructokinase family protein 0.78 0.31 -0.32
16 AT5G42050 DCD (Development and Cell Death) domain protein -0.78 0.33 -0.32
17 AT4G32720 La protein 1 La protein 1, La protein 1 0.78 0.3 -0.29
18 AT1G05700 Leucine-rich repeat transmembrane protein kinase protein 0.78 0.32 -0.32
19 AT4G37980 elicitor-activated gene 3-1 ATCAD7, CINNAMYL-ALCOHOL
DEHYDROGENASE 7,
ELICITOR-ACTIVATED GENE 3,
elicitor-activated gene 3-1		 -0.77 0.32 -0.32
20 AT2G22240 myo-inositol-1-phosphate synthase 2 INOSITOL 3-PHOSPHATE SYNTHASE 2,
MYO-INOSITOL-1-PHOSTPATE SYNTHASE
2, myo-inositol-1-phosphate
synthase 2		 -0.77 0.3 -0.31
21 AT2G22430 homeobox protein 6 homeobox protein 6, homeobox
protein 6		 -0.77 0.29 -0.31
22 AT5G01820 serine/threonine protein kinase 1 ATCIPK14, serine/threonine protein
kinase 1, CBL-INTERACTING PROTEIN
KINASE 14, SOS2-like protein
kinase 24, SNF1-RELATED PROTEIN
KINASE 3.15, serine/threonine
protein kinase 1		 -0.77 0.32 -0.33
23 AT5G53350 CLP protease regulatory subunit X CLP protease regulatory subunit X -0.76 0.31 -0.32
24 AT3G57150 homologue of NAP57 AtCBF5, AtNAP57, CBF5, homologue
of NAP57		 0.76 0.31 -0.32
25 AT1G15810 S15/NS1, RNA-binding protein 0.76 0.31 -0.27
26 AT3G49940 LOB domain-containing protein 38 LOB domain-containing protein 38 0.76 0.31 -0.33
27 AT3G46450 SEC14 cytosolic factor family protein / phosphoglyceride
transfer family protein		 -0.76 0.3 -0.32
28 AT2G01900 DNAse I-like superfamily protein 0.76 0.31 -0.33
29 AT3G08860 PYRIMIDINE 4 PYRIMIDINE 4 -0.76 0.33 -0.34
30 AT2G47790 Transducin/WD40 repeat-like superfamily protein 0.76 0.3 -0.32
31 AT4G25090 Riboflavin synthase-like superfamily protein 0.76 0.31 -0.32
32 AT3G44100 MD-2-related lipid recognition domain-containing protein -0.75 0.31 -0.31
33 AT3G01610 cell division cycle 48C cell division cycle 48C, embryo
defective 1354		 0.75 0.32 -0.32
34 AT1G50020 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast; EXPRESSED IN:
24 plant structures; EXPRESSED DURING: 15 growth stages;
Has 72 Blast hits to 72 proteins in 27 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.75 0.3 -0.33
35 AT4G24450 phosphoglucan, water dikinase ATGWD2, GWD3, phosphoglucan, water
dikinase		 -0.75 0.3 -0.31
36 AT5G40170 receptor like protein 54 receptor like protein 54, receptor
like protein 54		 -0.75 0.33 -0.3
37 AT4G37540 LOB domain-containing protein 39 LOB domain-containing protein 39 0.75 0.34 -0.3
38 AT1G24070 cellulose synthase-like A10 cellulose synthase-like A10,
CELLULOSE SYNTHASE LIKE A10,
cellulose synthase-like A10		 -0.75 0.3 -0.33
39 AT1G74560 NAP1-related protein 1 NAP1-related protein 1 0.75 0.28 -0.31
40 AT2G39450 Cation efflux family protein ATMTP11, MTP11 -0.75 0.32 -0.3
41 AT1G36380 unknown protein; LOCATED IN: endomembrane system; EXPRESSED
IN: 23 plant structures; EXPRESSED DURING: 15 growth
stages; Has 14 Blast hits to 14 proteins in 6 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
14; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.74 0.31 -0.34
42 AT1G19640 jasmonic acid carboxyl methyltransferase jasmonic acid carboxyl
methyltransferase		 -0.74 0.32 -0.32
43 AT3G51895 sulfate transporter 3;1 AST12, sulfate transporter 3;1 -0.74 0.32 -0.3
44 AT5G02530 RNA-binding (RRM/RBD/RNP motifs) family protein 0.74 0.3 -0.32
45 AT3G13590 Cysteine/Histidine-rich C1 domain family protein -0.74 0.33 -0.3
46 AT5G46350 WRKY DNA-binding protein 8 ARABIDOPSIS THALIANA WRKY
DNA-BINDING PROTEIN 8, WRKY
DNA-binding protein 8		 -0.74 0.33 -0.3
47 AT2G40830 RING-H2 finger C1A RING-H2 finger C1A -0.74 0.31 -0.33
48 AT1G71480 Nuclear transport factor 2 (NTF2) family protein -0.73 0.33 -0.32
49 AT1G23410 Ribosomal protein S27a / Ubiquitin family protein 0.73 0.3 -0.32
50 AT1G62310 transcription factor jumonji (jmjC) domain-containing
protein		 -0.73 0.3 -0.32
51 AT3G49580 response to low sulfur 1 RESPONSE TO LOW SULFUR 1 -0.73 0.33 -0.33
52 AT2G38790 unknown protein; Has 21 Blast hits to 21 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 19; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.73 0.3 -0.33
53 AT1G78490 cytochrome P450, family 708, subfamily A, polypeptide 3 cytochrome P450, family 708,
subfamily A, polypeptide 3		 -0.73 0.3 -0.3
54 AT1G47128 Granulin repeat cysteine protease family protein responsive to dehydration 21,
RESPONSIVE TO DEHYDRATION 21A		 -0.73 0.31 -0.34
55 AT4G32770 tocopherol cyclase, chloroplast / vitamin E deficient 1
(VTE1) / sucrose export defective 1 (SXD1)		 SUCROSE EXPORT DEFECTIVE 1,
VITAMIN E DEFICIENT 1		 -0.73 0.31 -0.3
56 AT1G12010 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.73 0.3 -0.31
57 AT3G03870 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G18130.1); Has 41 Blast hits
to 41 proteins in 11 species: Archae - 0; Bacteria - 0;
Metazoa - 2; Fungi - 0; Plants - 39; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.73 0.32 -0.32
58 AT3G21700 Ras-related small GTP-binding family protein ATSGP2, SGP2 -0.73 0.3 -0.31
59 AT4G34630 unknown protein; Has 30 Blast hits to 30 proteins in 10
species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0;
Plants - 24; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 -0.73 0.31 -0.32
60 AT5G50100 Putative thiol-disulphide oxidoreductase DCC -0.73 0.31 -0.31
61 AT1G76550 Phosphofructokinase family protein 0.73 0.31 -0.31
62 AT1G36370 serine hydroxymethyltransferase 7 serine hydroxymethyltransferase 7 -0.73 0.31 -0.33
63 AT1G70310 spermidine synthase 2 spermidine synthase 2 0.73 0.31 -0.33
64 AT1G28230 purine permease 1 ATPUP1, purine permease 1 -0.72 0.31 -0.3
65 AT5G58690 phosphatidylinositol-speciwc phospholipase C5 ATPLC5,
phosphatidylinositol-speciwc
phospholipase C5		 -0.72 0.31 -0.32
66 AT1G52050 Mannose-binding lectin superfamily protein 0.72 0.33 -0.29
67 AT2G24420 DNA repair ATPase-related -0.72 0.32 -0.33
68 AT4G27990 YGGT family protein ATYLMG1-2, YLMG1-2 -0.72 0.31 -0.33
69 AT2G42740 ribosomal protein large subunit 16A ribosomal protein large subunit
16A		 0.72 0.31 -0.31
70 AT4G11960 PGR5-like B PGR5-like B -0.72 0.3 -0.27
71 AT1G68910 WPP domain-interacting protein 2 WPP domain-interacting protein 2 -0.72 0.31 -0.35
72 AT5G49660 Leucine-rich repeat transmembrane protein kinase family
protein		 XYLEM INTERMIXED WITH PHLOEM 1 -0.72 0.32 -0.28
73 AT2G24040 Low temperature and salt responsive protein family -0.72 0.29 -0.32
74 AT5G53420 CCT motif family protein -0.71 0.31 -0.34
75 AT4G22260 Alternative oxidase family protein IMMUTANS, IM1 -0.71 0.32 -0.32
76 AT2G40460 Major facilitator superfamily protein -0.71 0.29 -0.29
77 AT1G73740 UDP-Glycosyltransferase superfamily protein -0.71 0.3 -0.32
78 AT1G59700 glutathione S-transferase TAU 16 glutathione S-transferase TAU 16,
glutathione S-transferase TAU 16		 -0.71 0.3 -0.32
79 AT2G21340 MATE efflux family protein -0.71 0.32 -0.31
80 AT5G53130 cyclic nucleotide gated channel 1 CYCLIC NUCLEOTIDE-GATED CHANNEL 1,
cyclic nucleotide gated channel 1		 -0.71 0.31 -0.34
81 AT1G65890 acyl activating enzyme 12 acyl activating enzyme 12 -0.71 0.3 -0.3
82 AT1G56650 production of anthocyanin pigment 1 MYB DOMAIN PROTEIN 75,
MYELOBLASTOSIS PROTEIN 75,
production of anthocyanin pigment
1, SUC-INDUCED ANTHOCYANIN
ACCUMULATION 1		 -0.7 0.31 -0.32
83 AT1G64970 gamma-tocopherol methyltransferase gamma-tocopherol
methyltransferase, TMT1, VITAMIN E
DEFICIENT 4		 -0.7 0.3 -0.32
84 AT5G62000 auxin response factor 2 ARF1-BINDING PROTEIN, auxin
response factor 2, HLS1
SUPPRESSOR, ORESARA 14		 -0.7 0.32 -0.31
85 AT4G23990 cellulose synthase like G3 ARABIDOPSIS THALIANA CELLULOSE
SYNTHASE-LIKE G3, cellulose
synthase like G3		 -0.7 0.32 -0.34
86 AT5G65840 Thioredoxin superfamily protein -0.7 0.31 -0.33
87 AT5G14700 NAD(P)-binding Rossmann-fold superfamily protein -0.7 0.33 -0.32
88 AT1G54160 nuclear factor Y, subunit A5 nuclear factor Y, subunit A5,
NUCLEAR FACTOR Y A5		 -0.7 0.33 -0.32
89 AT5G11840 Protein of unknown function (DUF1230) -0.69 0.31 -0.32
90 AT1G55280 Lipase/lipooxygenase, PLAT/LH2 family protein -0.69 0.31 -0.31
91 AT5G54060 UDP-glucose:flavonoid 3-o-glucosyltransferase UDP-glucose:flavonoid
3-o-glucosyltransferase		 -0.69 0.31 -0.31
92 AT1G73040 Mannose-binding lectin superfamily protein -0.69 0.3 -0.31
93 AT1G09080 Heat shock protein 70 (Hsp 70) family protein binding protein 3 -0.69 0.33 -0.32
94 AT5G52410 CONTAINS InterPro DOMAIN/s: S-layer homology domain
(InterPro:IPR001119); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G23890.1); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.69 0.31 -0.33
95 AT5G46410 SCP1-like small phosphatase 4 SCP1-like small phosphatase 4 -0.69 0.33 -0.31
96 AT2G43430 glyoxalase 2-1 glyoxalase 2-1, GLYOXALASE II -0.69 0.33 -0.3
97 AT2G40435 BEST Arabidopsis thaliana protein match is: transcription
regulators (TAIR:AT3G56220.1); Has 289 Blast hits to 289
proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 289; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.69 0.31 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
98 C0111 Hexa-2-O-glycerol-β-galactopyranoside Hexa-2-O-gllycerol-β-D-galactopyranoside - - -0.82 0.44 -0.42
99 C0092 Fumaric acid - Fumarate citrulline-nitric oxide cycle,
succinate + a ubiquinone -> a ubiquinol + fumarate,
superpathway of glyoxylate cycle and fatty acid degradation,
tyrosine degradation I,
aerobic respiration (alternative oxidase pathway),
inosine-5'-phosphate biosynthesis II,
arginine biosynthesis I,
TCA cycle variation V (plant),
TCA cycle variation III (eukaryotic),
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
purine nucleotides de novo biosynthesis II,
arginine biosynthesis II (acetyl cycle),
urea cycle,
aerobic respiration (cytochrome c) 		-0.73 0.32 -0.3 C0092
100 C0125 isorhamnetin-3-O-glucoside - - - 0.72 0.45 -0.43
101 C0118 Hyperoside - Quercetin-3-glucoside quercetin glucoside biosynthesis (Arabidopsis),
rutin biosynthesis 		0.72 0.45 -0.45 C0118