AT4G31270 : -
Query Information
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AGICode AT4G31270
Description sequence-specific DNA binding transcription factors
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G31270 sequence-specific DNA binding transcription factors 1 0.32 -0.31
2 AT5G43830 Aluminium induced protein with YGL and LRDR motifs 0.76 0.3 -0.29
3 AT2G40700 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.74 0.29 -0.31
4 AT2G38820 Protein of unknown function (DUF506) 0.74 0.3 -0.34
5 AT1G10270 glutamine-rich protein 23 glutamine-rich protein 23 -0.74 0.32 -0.33
6 AT5G09840 Putative endonuclease or glycosyl hydrolase -0.73 0.32 -0.3
7 AT1G80920 Chaperone DnaJ-domain superfamily protein AtJ8, translocon at the outer
envelope membrane of chloroplasts
12, J8, translocon at the outer
envelope membrane of chloroplasts
12		 0.72 0.3 -0.33
8 AT4G01026 PYR1-like 7 PYR1-like 7, regulatory components
of ABA receptor 2		 0.72 0.3 -0.33
9 AT3G26510 Octicosapeptide/Phox/Bem1p family protein 0.72 0.29 -0.32
10 AT1G70290 trehalose-6-phosphatase synthase S8 ATTPS8, ATTPSC,
trehalose-6-phosphatase synthase
S8		 0.72 0.32 -0.29
11 AT4G12640 RNA recognition motif (RRM)-containing protein -0.71 0.31 -0.32
12 AT5G63480 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.71 0.31 -0.31
13 AT1G71850 Ubiquitin carboxyl-terminal hydrolase family protein -0.71 0.3 -0.31
14 AT5G55920 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 OLIGOCELLULA 2 -0.71 0.33 -0.31
15 AT3G56360 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G05250.1); Has 45 Blast
hits to 45 proteins in 13 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.7 0.3 -0.33
16 AT1G23390 Kelch repeat-containing F-box family protein 0.7 0.31 -0.3
17 AT3G17770 Dihydroxyacetone kinase 0.7 0.31 -0.33
18 AT2G17450 RING-H2 finger A3A RING-H2 finger A3A 0.7 0.33 -0.34
19 AT1G55900 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 embryo defective 1860, TIM50 -0.7 0.33 -0.3
20 AT4G05070 Wound-responsive family protein 0.7 0.33 -0.34
21 AT5G22920 CHY-type/CTCHY-type/RING-type Zinc finger protein 0.69 0.33 -0.3
22 AT3G18640 Zinc finger C-x8-C-x5-C-x3-H type family protein -0.69 0.29 -0.31
23 AT3G19030 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: pyridoxine biosynthetic process, homoserine
biosynthetic process; LOCATED IN: endomembrane system;
EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9
growth stages; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT1G49500.1); Has 22 Blast hits to 22
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.68 0.29 -0.34
24 AT4G04940 transducin family protein / WD-40 repeat family protein -0.68 0.33 -0.31
25 AT4G25730 FtsJ-like methyltransferase family protein -0.68 0.31 -0.31
26 AT4G03430 pre-mRNA splicing factor-related EMBRYO DEFECTIVE 2770, STABILIZED
1		 -0.68 0.33 -0.32
27 AT4G01330 Protein kinase superfamily protein 0.68 0.32 -0.33
28 AT1G27290 unknown protein; Has 44 Blast hits to 44 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.67 0.3 -0.31
29 AT2G34357 ARM repeat superfamily protein -0.67 0.32 -0.32
30 AT5G04280 RNA-binding (RRM/RBD/RNP motifs) family protein with
retrovirus zinc finger-like domain		 AtRZ-1c, RZ-1c -0.67 0.32 -0.31
31 AT5G02020 Encodes a protein involved in salt tolerance, names SIS
(Salt Induced Serine rich).		 Salt Induced Serine rich 0.67 0.32 -0.34
32 AT5G06550 CONTAINS InterPro DOMAIN/s: Transcription factor
jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347),
F-box domain, Skp2-like (InterPro:IPR022364), Transcription
factor jumonji (InterPro:IPR013129); BEST Arabidopsis
thaliana protein match is: transferases, transferring
glycosyl groups (TAIR:AT1G78280.1); Has 1762 Blast hits to
1747 proteins in 292 species: Archae - 0; Bacteria - 297;
Metazoa - 877; Fungi - 168; Plants - 221; Viruses - 0;
Other Eukaryotes - 199 (source: NCBI BLink).		 -0.67 0.31 -0.29
33 AT5G55000 potassium channel tetramerisation domain-containing protein
/ pentapeptide repeat-containing protein		 FIP2 0.67 0.32 -0.31
34 AT1G55000 peptidoglycan-binding LysM domain-containing protein 0.67 0.32 -0.3
35 AT1G08570 atypical CYS HIS rich thioredoxin 4 atypical CYS HIS rich thioredoxin
4		 0.66 0.33 -0.32
36 AT3G13940 DNA binding;DNA-directed RNA polymerases -0.66 0.3 -0.31
37 AT2G15690 Tetratricopeptide repeat (TPR)-like superfamily protein -0.66 0.31 -0.3
38 AT1G80910 Protein of unknown function (DUF1712) -0.66 0.35 -0.32
39 AT3G07770 HEAT SHOCK PROTEIN 89.1 HEAT SHOCK PROTEIN 90-6, HEAT
SHOCK PROTEIN 90.6, HEAT SHOCK
PROTEIN 89.1		 -0.66 0.32 -0.32
40 AT5G16750 Transducin family protein / WD-40 repeat family protein TORMOZEMBRYO DEFECTIVE -0.66 0.32 -0.35
41 AT5G09420 translocon at the outer membrane of chloroplasts 64-V AtmtOM64, translocon at the outer
membrane of chloroplasts 64-V,
ARABIDOPSIS THALIANA TRANSLOCON AT
THE OUTER MEMBRANE OF CHLOROPLASTS
64-V, outer membrane 64,
translocon at the outer membrane
of chloroplasts 64-V		 -0.66 0.31 -0.34
42 AT3G58660 Ribosomal protein L1p/L10e family -0.66 0.33 -0.3
43 AT2G41760 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function WDYHV (InterPro:IPR019161); Has 201 Blast
hits to 201 proteins in 90 species: Archae - 0; Bacteria -
2; Metazoa - 132; Fungi - 10; Plants - 30; Viruses - 0;
Other Eukaryotes - 27 (source: NCBI BLink).		 0.66 0.3 -0.31
44 AT2G25900 Zinc finger C-x8-C-x5-C-x3-H type family protein ATCTH, A. THALIANA TANDEM ZINC
FINGER PROTEIN 1		 0.65 0.33 -0.32
45 AT3G06530 ARM repeat superfamily protein -0.65 0.33 -0.3
46 AT2G47990 transducin family protein / WD-40 repeat family protein EMBRYO SAC DEVELOPMENT ARREST 13,
EMBRYO SAC DEVELOPMENT ARREST 19,
SLOW WALKER1		 -0.65 0.3 -0.31
47 AT3G21540 transducin family protein / WD-40 repeat family protein -0.65 0.33 -0.31
48 AT5G06110 DnaJ domain ;Myb-like DNA-binding domain -0.65 0.32 -0.31
49 AT1G77030 hydrolases, acting on acid anhydrides, in
phosphorus-containing anhydrides;ATP-dependent
helicases;nucleic acid binding;ATP binding;RNA
binding;helicases		 -0.65 0.33 -0.3
50 AT5G61440 atypical CYS HIS rich thioredoxin 5 atypical CYS HIS rich thioredoxin
5		 0.64 0.34 -0.31
51 AT2G20670 Protein of unknown function (DUF506) 0.64 0.33 -0.33
52 AT3G44950 glycine-rich protein 0.64 0.32 -0.29
53 AT1G10150 Carbohydrate-binding protein 0.64 0.33 -0.31
54 AT5G40480 embryo defective 3012 embryo defective 3012 -0.64 0.33 -0.29
55 AT2G45170 AUTOPHAGY 8E AUTOPHAGY 8E, AUTOPHAGY 8E 0.64 0.33 -0.31
56 AT2G04070 MATE efflux family protein -0.64 0.31 -0.32
57 AT1G03090 methylcrotonyl-CoA carboxylase alpha chain, mitochondrial /
3-methylcrotonyl-CoA carboxylase 1 (MCCA)		 MCCA 0.64 0.31 -0.31
58 AT5G13740 zinc induced facilitator 1 zinc induced facilitator 1 0.63 0.32 -0.32
59 AT3G61240 DEA(D/H)-box RNA helicase family protein -0.63 0.33 -0.31
60 AT3G15000 cobalt ion binding -0.63 0.32 -0.3
61 AT4G38200 SEC7-like guanine nucleotide exchange family protein -0.63 0.33 -0.3
62 AT3G52070 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 23 Blast hits to 23 proteins
in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.63 0.33 -0.3
63 AT3G11964 RNA binding;RNA binding -0.63 0.3 -0.31
64 AT1G06720 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.63 0.32 -0.3
65 AT5G47455 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED
DURING: 8 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G17310.1); Has 147 Blast
hits to 147 proteins in 13 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 147; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.62 0.29 -0.33
66 AT5G58760 damaged DNA binding 2 damaged DNA binding 2 -0.62 0.32 -0.31
67 AT3G08730 protein-serine kinase 1 ARABIDOPSIS THALIANA
PROTEIN-SERINE KINASE 1,
ARABIDOPSIS THALIANA
PROTEIN-SERINE KINASE 6, ATS6K1,
protein-serine kinase 1,
ROTEIN-SERINE KINASE 6, P70
RIBOSOMAL S6 KINASE		 -0.62 0.32 -0.34
68 AT5G03230 Protein of unknown function, DUF584 0.62 0.3 -0.32
69 AT4G30990 ARM repeat superfamily protein -0.62 0.31 -0.3
70 AT4G30150 CONTAINS InterPro DOMAIN/s: Nucleolar 27S pre-rRNA
processing, Urb2/Npa2 (InterPro:IPR018849); Has 58 Blast
hits to 49 proteins in 21 species: Archae - 0; Bacteria -
2; Metazoa - 2; Fungi - 0; Plants - 44; Viruses - 3; Other
Eukaryotes - 7 (source: NCBI BLink).		 -0.62 0.31 -0.31
71 AT5G61030 glycine-rich RNA-binding protein 3 glycine-rich RNA-binding protein 3 -0.62 0.3 -0.32
72 AT5G59980 Polymerase/histidinol phosphatase-like -0.62 0.33 -0.33
73 AT1G14650 SWAP (Suppressor-of-White-APricot)/surp domain-containing
protein / ubiquitin family protein		 -0.62 0.31 -0.31
74 AT2G05270 unknown protein; Has 3 Blast hits to 3 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.62 0.32 -0.32
75 AT3G09440 Heat shock protein 70 (Hsp 70) family protein -0.62 0.31 -0.31
76 AT5G53400 HSP20-like chaperones superfamily protein BOBBER1 -0.62 0.32 -0.32
77 AT3G01820 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.61 0.32 -0.31
78 AT3G54980 Pentatricopeptide repeat (PPR) superfamily protein -0.61 0.3 -0.34
79 AT1G09415 NIM1-interacting 3 NIM1-interacting 3 0.61 0.31 -0.31
80 AT4G24020 NIN like protein 7 NIN like protein 7 0.61 0.3 -0.3
81 AT5G20180 Ribosomal protein L36 -0.61 0.29 -0.32
82 AT1G13020 eukaryotic initiation factor 4B2 eukaryotic initiation factor 4B2 -0.61 0.31 -0.32
83 AT1G11940 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 0.61 0.33 -0.29
84 AT3G57320 unknown protein; Has 30 Blast hits to 30 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0;
Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.61 0.3 -0.29
85 AT5G57990 ubiquitin-specific protease 23 ubiquitin-specific protease 23 -0.6 0.29 -0.32
86 AT3G48250 Pentatricopeptide repeat (PPR) superfamily protein Buthionine sulfoximine-insensitive
roots 6		 -0.6 0.33 -0.33
87 AT2G01970 Endomembrane protein 70 protein family -0.6 0.31 -0.31
88 AT5G60680 Protein of unknown function, DUF584 0.6 0.32 -0.32
89 AT1G53170 ethylene response factor 8 ATERF-8, ETHYLENE RESPONSE ELEMENT
BINDING FACTOR 4, ethylene
response factor 8		 0.6 0.33 -0.33
90 AT1G48320 Thioesterase superfamily protein 0.6 0.31 -0.31
91 AT5G10840 Endomembrane protein 70 protein family -0.6 0.31 -0.3
92 AT4G36020 cold shock domain protein 1 cold shock domain protein 1 -0.6 0.29 -0.33
93 AT5G47360 Tetratricopeptide repeat (TPR)-like superfamily protein -0.6 0.32 -0.33
94 AT3G19740 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.6 0.3 -0.32
95 AT3G18295 Protein of unknown function (DUF1639) 0.6 0.32 -0.29
96 AT5G24890 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT2G24550.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.59 0.33 -0.32
97 AT5G21170 5'-AMP-activated protein kinase beta-2 subunit protein AKINBETA1 0.59 0.32 -0.31
98 AT1G06670 nuclear DEIH-boxhelicase nuclear DEIH-boxhelicase -0.59 0.33 -0.32
99 AT5G14580 polyribonucleotide nucleotidyltransferase, putative -0.58 0.3 -0.31
100 AT5G11040 TRS120 AtTRS120, TRS120 -0.58 0.31 -0.3
101 AT4G38900 Basic-leucine zipper (bZIP) transcription factor family
protein		 0.58 0.32 -0.28
102 AT3G47630 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Mitochondrial matrix Mmp37 (InterPro:IPR015222); Has 325
Blast hits to 325 proteins in 172 species: Archae - 0;
Bacteria - 0; Metazoa - 109; Fungi - 140; Plants - 43;
Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink).		 0.58 0.32 -0.3
103 AT1G78550 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.58 0.31 -0.29
104 AT5G67330 natural resistance associated macrophage protein 4 ARABIDOPSIS THALIANA NATURAL
RESISTANCE ASSOCIATED MACROPHAGE
PROTEIN 4, natural resistance
associated macrophage protein 4		 0.58 0.32 -0.31
105 AT3G56980 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 BHLH039, OBP3-RESPONSIVE GENE 3 0.58 0.34 -0.32
106 AT1G21830 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF740 (InterPro:IPR008004); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G44608.1); Has 49 Blast hits to 49 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.58 0.3 -0.34
107 AT3G52930 Aldolase superfamily protein -0.57 0.31 -0.32
108 AT1G55915 zinc ion binding -0.57 0.33 -0.32
109 AT5G19020 mitochondrial editing factor 18 mitochondrial editing factor 18 -0.57 0.3 -0.32
110 AT5G03440 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G54880.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.57 0.32 -0.32
111 AT2G22125 binding cellulose synthase-interactive
protein 1, POM-POM 2		 -0.57 0.33 -0.3
112 AT1G34550 Protein of unknown function (DUF616) EMBRYO DEFECTIVE 2756 -0.57 0.34 -0.33
113 AT4G39260 cold, circadian rhythm, and RNA binding 1 GLYCINE-RICH PROTEIN 8, cold,
circadian rhythm, and RNA binding
1, glycine-rich RNA-binding
protein 8, GRP8		 -0.57 0.31 -0.3
114 AT1G19025 DNA repair metallo-beta-lactamase family protein 0.56 0.32 -0.3
115 AT5G11910 alpha/beta-Hydrolases superfamily protein 0.56 0.32 -0.31
116 AT2G06010 OBP3-responsive gene 4 OBP3-responsive gene 4 0.56 0.3 -0.3
117 AT2G18670 RING/U-box superfamily protein 0.56 0.3 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
118 C0030 3-Methylsulfinyl-n-propylglucosinolate - 3-Methylsulfinylpropyl-glucosinolate glucosinolate biosynthesis from homomethionine 0.69 0.44 -0.44 C0030
119 C0215 PR_MST_2527.1 - - - -0.68 0.47 -0.43
120 C0088 FAD - FAD cytokinins degradation,
lysine degradation II,
valine degradation I,
isoleucine degradation I,
flavin biosynthesis I (bacteria and plants) 		0.68 0.45 -0.42 C0088
121 C0173 MST_2301.7 - - - -0.64 0.41 -0.44