AT4G30890 : ubiquitin-specific protease 24
Query Information
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AGICode AT4G30890
Description ubiquitin-specific protease 24
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G30890 ubiquitin-specific protease 24 ubiquitin-specific protease 24 1 0.31 -0.3
2 AT1G76120 Pseudouridine synthase family protein 0.82 0.33 -0.33
3 AT5G43960 Nuclear transport factor 2 (NTF2) family protein with RNA
binding (RRM-RBD-RNP motifs) domain		 0.82 0.3 -0.31
4 AT5G19820 ARM repeat superfamily protein embryo defective 2734 0.81 0.31 -0.31
5 AT2G47990 transducin family protein / WD-40 repeat family protein EMBRYO SAC DEVELOPMENT ARREST 13,
EMBRYO SAC DEVELOPMENT ARREST 19,
SLOW WALKER1		 0.81 0.33 -0.32
6 AT2G29760 Tetratricopeptide repeat (TPR)-like superfamily protein ORGANELLE TRANSCRIPT PROCESSING 81 0.8 0.33 -0.32
7 AT3G57940 Domain of unknown function (DUF1726) ;Putative ATPase
(DUF699)		 0.8 0.32 -0.31
8 AT5G54910 DEA(D/H)-box RNA helicase family protein 0.8 0.32 -0.3
9 AT5G19920 Transducin/WD40 repeat-like superfamily protein 0.8 0.32 -0.33
10 AT1G60080 3'-5'-exoribonuclease family protein 0.8 0.31 -0.32
11 AT1G16280 RNA helicase 36 Arabidopsis thaliana RNA helicase
36, RNA helicase 36, SLOW WALKER 3		 0.8 0.29 -0.3
12 AT1G69070 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Nop14-like protein (InterPro:IPR007276); Has 69842 Blast
hits to 35213 proteins in 1572 species: Archae - 363;
Bacteria - 20593; Metazoa - 20851; Fungi - 8010; Plants -
2912; Viruses - 517; Other Eukaryotes - 16596 (source: NCBI
BLink).		 0.79 0.3 -0.28
13 AT3G51320 Pentatricopeptide repeat (PPR) superfamily protein 0.79 0.32 -0.29
14 AT1G69950 transposable element gene 0.79 0.34 -0.33
15 AT3G59670 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G37440.2); Has 77 Blast hits
to 77 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other
Eukaryotes - 4 (source: NCBI BLink).		 0.78 0.3 -0.33
16 AT3G57150 homologue of NAP57 AtCBF5, AtNAP57, CBF5, homologue
of NAP57		 0.78 0.33 -0.31
17 AT2G34780 maternal effect embryo arrest 22 EMBRYO DEFECTIVE 1611, MATERNAL
EFFECT EMBRYO ARREST 22		 0.78 0.31 -0.33
18 AT1G26190 Phosphoribulokinase / Uridine kinase family 0.78 0.32 -0.32
19 AT2G41430 dehydration-induced protein (ERD15) CTC-Interacting Domain 1, EARLY
RESPONSIVE TO DEHYDRATION 15,
LIGHT STRESS-REGULATED 1		 -0.78 0.32 -0.32
20 AT3G18600 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.77 0.29 -0.32
21 AT1G19450 Major facilitator superfamily protein 0.77 0.33 -0.33
22 AT1G13730 Nuclear transport factor 2 (NTF2) family protein with RNA
binding (RRM-RBD-RNP motifs) domain		 0.77 0.3 -0.31
23 AT2G36070 translocase inner membrane subunit 44-2 translocase inner membrane subunit
44-2, translocase inner membrane
subunit 44-2		 0.76 0.31 -0.29
24 AT1G18070 Translation elongation factor EF1A/initiation factor
IF2gamma family protein		 0.76 0.3 -0.32
25 AT1G14610 valyl-tRNA synthetase / valine--tRNA ligase (VALRS) TWIN 2, VALYL TRNA SYNTHETASE 0.76 0.3 -0.31
26 AT4G30700 Pentatricopeptide repeat (PPR) superfamily protein 0.75 0.3 -0.31
27 AT5G57900 SKP1 interacting partner 1 SKP1 interacting partner 1 -0.75 0.32 -0.32
28 AT4G14850 Pentatricopeptide repeat (PPR) superfamily protein lovastatin insensitive 1, MEF11 0.75 0.31 -0.34
29 AT1G79090 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 25 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Topoisomerase II-associated protein PAT1
(InterPro:IPR019167); BEST Arabidopsis thaliana protein
match is: Topoisomerase II-associated protein PAT1
(TAIR:AT3G22270.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 0.75 0.33 -0.3
30 AT1G79080 Pentatricopeptide repeat (PPR) superfamily protein 0.75 0.28 -0.31
31 AT5G15760 Ribosomal protein PSRP-3/Ycf65 0.75 0.31 -0.32
32 AT5G38895 RING/U-box superfamily protein -0.75 0.3 -0.31
33 AT5G20200 nucleoporin-related 0.74 0.32 -0.32
34 AT3G06780 glycine-rich protein -0.74 0.3 -0.33
35 AT1G77550 tubulin-tyrosine ligases;tubulin-tyrosine ligases 0.74 0.31 -0.31
36 AT3G14730 Pentatricopeptide repeat (PPR) superfamily protein 0.74 0.35 -0.31
37 AT3G01160 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cytosol, nucleus;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: NUC153
(InterPro:IPR012580); Has 36638 Blast hits to 21323
proteins in 1057 species: Archae - 109; Bacteria - 2369;
Metazoa - 13796; Fungi - 4858; Plants - 1657; Viruses -
489; Other Eukaryotes - 13360 (source: NCBI BLink).		 0.74 0.32 -0.31
38 AT5G39960 GTP binding;GTP binding 0.74 0.29 -0.31
39 AT3G01610 cell division cycle 48C cell division cycle 48C, embryo
defective 1354		 0.73 0.32 -0.3
40 AT1G80410 tetratricopeptide repeat (TPR)-containing protein EMBRYO DEFECTIVE 2753, OMISHA 0.73 0.3 -0.32
41 AT1G70590 F-box family protein -0.73 0.33 -0.3
42 AT5G10695 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G57123.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.73 0.35 -0.34
43 AT1G26370 RNA helicase family protein 0.73 0.33 -0.31
44 AT3G52950 CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing
protein		 0.73 0.35 -0.31
45 AT2G31010 Protein kinase superfamily protein 0.73 0.3 -0.32
46 AT1G13030 sphere organelles protein-related 0.73 0.33 -0.32
47 AT3G11100 sequence-specific DNA binding transcription factors -0.73 0.34 -0.31
48 AT1G73740 UDP-Glycosyltransferase superfamily protein -0.73 0.34 -0.3
49 AT3G44850 Protein kinase superfamily protein 0.73 0.31 -0.31
50 AT5G06000 eukaryotic translation initiation factor 3G2 ARABIDOPSIS THALIANA EUKARYOTIC
TRANSLATION INITIATION FACTOR 3G2,
eukaryotic translation initiation
factor 3G2		 0.73 0.31 -0.34
51 AT5G20980 methionine synthase 3 methionine synthase 3, methionine
synthase 3		 0.73 0.31 -0.33
52 AT2G33410 RNA-binding (RRM/RBD/RNP motifs) family protein 0.73 0.32 -0.3
53 AT1G63810 CONTAINS InterPro DOMAIN/s: Nrap protein
(InterPro:IPR005554); Has 396 Blast hits to 382 proteins in
182 species: Archae - 3; Bacteria - 2; Metazoa - 142; Fungi
- 146; Plants - 43; Viruses - 0; Other Eukaryotes - 60
(source: NCBI BLink).		 0.72 0.31 -0.31
54 AT3G53940 Mitochondrial substrate carrier family protein 0.72 0.3 -0.31
55 AT2G40660 Nucleic acid-binding, OB-fold-like protein 0.72 0.32 -0.31
56 AT2G17580 Polynucleotide adenylyltransferase family protein 0.72 0.3 -0.33
57 AT4G23640 Potassium transporter family protein ATKT3, KUP4, TINY ROOT HAIR 1 0.72 0.31 -0.31
58 AT5G67240 small RNA degrading nuclease 3 small RNA degrading nuclease 3 0.72 0.33 -0.33
59 AT2G35040 AICARFT/IMPCHase bienzyme family protein 0.72 0.31 -0.3
60 AT4G38050 Xanthine/uracil permease family protein 0.72 0.33 -0.32
61 AT2G21090 Pentatricopeptide repeat (PPR-like) superfamily protein 0.71 0.32 -0.3
62 AT4G13160 Protein of unknown function, DUF593 -0.71 0.31 -0.32
63 AT5G37670 HSP20-like chaperones superfamily protein -0.71 0.31 -0.33
64 AT3G18640 Zinc finger C-x8-C-x5-C-x3-H type family protein 0.71 0.29 -0.33
65 AT4G37130 hydroxyproline-rich glycoprotein family protein 0.71 0.3 -0.32
66 AT3G19510 Homeodomain-like protein with RING/FYVE/PHD-type zinc
finger domain		 HAT3.1 0.71 0.29 -0.31
67 AT5G39840 ATP-dependent RNA helicase, mitochondrial, putative 0.71 0.34 -0.3
68 AT5G40520 unknown protein; Has 3679 Blast hits to 2474 proteins in
390 species: Archae - 10; Bacteria - 571; Metazoa - 1012;
Fungi - 528; Plants - 214; Viruses - 74; Other Eukaryotes -
1270 (source: NCBI BLink).		 0.71 0.3 -0.32
69 AT5G09860 nuclear matrix protein-related AtHPR1, AtTHO1, HPR1, THO1 0.71 0.31 -0.32
70 AT5G16120 alpha/beta-Hydrolases superfamily protein -0.7 0.31 -0.34
71 AT5G04760 Duplicated homeodomain-like superfamily protein -0.7 0.32 -0.3
72 AT3G15070 RING/U-box superfamily protein -0.7 0.35 -0.31
73 AT1G73040 Mannose-binding lectin superfamily protein -0.7 0.3 -0.33
74 AT4G29420 F-box/RNI-like superfamily protein -0.7 0.32 -0.31
75 AT3G19280 fucosyltransferase 11 ATFUT11, FUCT1, FUCTA,
fucosyltransferase 11		 -0.7 0.33 -0.3
76 AT2G22690 zinc ion binding -0.69 0.3 -0.31
77 AT4G12410 SAUR-like auxin-responsive protein family -0.69 0.3 -0.33
78 AT1G11050 Protein kinase superfamily protein -0.69 0.34 -0.32
79 AT1G73500 MAP kinase kinase 9 ATMKK9, MAP kinase kinase 9 -0.68 0.31 -0.31
80 AT3G21270 DOF zinc finger protein 2 DOF zinc finger protein 2, DOF
zinc finger protein 2		 -0.68 0.32 -0.32
81 AT4G27470 RING membrane-anchor 3 ATRMA3, RING membrane-anchor 3 -0.68 0.31 -0.29
82 AT2G31800 Integrin-linked protein kinase family -0.68 0.32 -0.32
83 AT5G19070 SNARE associated Golgi protein family -0.68 0.31 -0.32
84 AT1G54210 Ubiquitin-like superfamily protein AUTOPHAGY 12, ATATG12, AUTOPHAGY
12 A		 -0.67 0.32 -0.31
85 AT5G66250 kinectin-related -0.67 0.32 -0.3
86 AT5G45630 Protein of unknown function, DUF584 -0.67 0.32 -0.31
87 AT1G50740 Transmembrane proteins 14C -0.67 0.32 -0.33
88 AT1G80180 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 10 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G15400.3); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.67 0.32 -0.3
89 AT3G52800 A20/AN1-like zinc finger family protein -0.67 0.32 -0.3
90 AT1G56090 Tetratricopeptide repeat (TPR)-like superfamily protein -0.67 0.31 -0.3
91 AT1G06630 F-box/RNI-like superfamily protein -0.66 0.34 -0.33
92 AT1G75290 NAD(P)-binding Rossmann-fold superfamily protein -0.66 0.33 -0.32
93 AT4G38090 Ribosomal protein S5 domain 2-like superfamily protein -0.66 0.31 -0.31
94 AT3G56880 VQ motif-containing protein -0.65 0.35 -0.31
95 AT3G54380 SAC3/GANP/Nin1/mts3/eIF-3 p25 family AtSAC3C, yeast Sac3 homolog C -0.65 0.33 -0.32
96 AT4G10730 Protein kinase superfamily protein -0.65 0.31 -0.29
97 AT3G19580 zinc-finger protein 2 zinc-finger protein 2, zinc-finger
protein 2		 -0.65 0.3 -0.32
98 AT3G51500 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 23 Blast hits to 23 proteins
in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.65 0.33 -0.33
99 AT1G03610 Protein of unknown function (DUF789) -0.65 0.32 -0.33
100 AT1G66090 Disease resistance protein (TIR-NBS class) -0.64 0.32 -0.28
101 AT2G18750 Calmodulin-binding protein -0.64 0.31 -0.31
102 AT1G53060 Legume lectin family protein -0.64 0.32 -0.32
103 AT3G62650 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G47485.1); Has 57 Blast hits
to 57 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.64 0.3 -0.29
104 AT4G20380 LSD1 zinc finger family protein LESION SIMULATING DISEASE -0.63 0.32 -0.3
105 AT3G48350 Cysteine proteinases superfamily protein cysteine endopeptidase 3 -0.63 0.32 -0.33