AGICode | AT4G31200 |
Description | SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT4G31200 | SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein |
1 | 0.3 | -0.29 | |||
2 | AT2G47620 | SWITCH/sucrose nonfermenting 3A | SWITCH/sucrose nonfermenting 3A, CHB1, SWITCH/sucrose nonfermenting 3A |
0.71 | 0.32 | -0.32 | ||
3 | AT2G23620 | methyl esterase 1 | ARABIDOPSIS THALIANA METHYL ESTERASE 1, methyl esterase 1 |
-0.71 | 0.33 | -0.32 | ||
4 | AT1G10320 | Zinc finger C-x8-C-x5-C-x3-H type family protein | 0.69 | 0.31 | -0.32 | |||
5 | AT1G44780 | CONTAINS InterPro DOMAIN/s: Histone chaperone domain CHZ (InterPro:IPR019098); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G08310.1); Has 18105 Blast hits to 11200 proteins in 808 species: Archae - 37; Bacteria - 1195; Metazoa - 7724; Fungi - 1727; Plants - 674; Viruses - 183; Other Eukaryotes - 6565 (source: NCBI BLink). |
0.68 | 0.31 | -0.32 | |||
6 | AT5G42890 | sterol carrier protein 2 | STEROL CARRIER PROTEIN 2, sterol carrier protein 2 |
-0.68 | 0.31 | -0.29 | ||
7 | AT3G25780 | allene oxide cyclase 3 | allene oxide cyclase 3 | -0.68 | 0.34 | -0.31 | ||
8 | AT3G17030 | Nucleic acid-binding proteins superfamily | 0.68 | 0.33 | -0.32 | |||
9 | AT1G19130 | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF985 (InterPro:IPR009327), RmlC-like jelly roll fold (InterPro:IPR014710); Has 1465 Blast hits to 1465 proteins in 584 species: Archae - 10; Bacteria - 1038; Metazoa - 19; Fungi - 43; Plants - 51; Viruses - 0; Other Eukaryotes - 304 (source: NCBI BLink). |
-0.67 | 0.31 | -0.34 | |||
10 | AT4G31800 | WRKY DNA-binding protein 18 | ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 18, WRKY DNA-binding protein 18 |
-0.66 | 0.33 | -0.31 | ||
11 | AT3G58160 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
ATMYOS3, MYOSIN XI J, MYOSIN A3, MYOSIN XI-16, XIJ |
0.66 | 0.32 | -0.31 | ||
12 | AT1G55540 | Nuclear pore complex protein | 0.66 | 0.3 | -0.32 | |||
13 | AT4G16210 | enoyl-CoA hydratase/isomerase A | ENOYL-COA HYDRATASE 2, enoyl-CoA hydratase/isomerase A |
-0.65 | 0.31 | -0.32 | ||
14 | AT3G12550 | XH/XS domain-containing protein | factor of DNA methylation 3 | 0.65 | 0.34 | -0.31 | ||
15 | AT2G37050 | Leucine-rich repeat protein kinase family protein | 0.64 | 0.3 | -0.32 | |||
16 | AT2G35930 | plant U-box 23 | plant U-box 23 | -0.64 | 0.32 | -0.3 | ||
17 | AT5G27380 | glutathione synthetase 2 | glutathione synthetase 2, GSHB | -0.64 | 0.3 | -0.32 | ||
18 | AT5G47220 | ethylene responsive element binding factor 2 | ETHYLENE RESPONSE FACTOR- 2, ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 2, ethylene responsive element binding factor 2 |
-0.64 | 0.32 | -0.33 | ||
19 | AT5G51660 | cleavage and polyadenylation specificity factor 160 | ATCPSF160, cleavage and polyadenylation specificity factor 160 |
0.63 | 0.32 | -0.31 | ||
20 | AT1G03560 | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.63 | 0.32 | -0.3 | |||
21 | AT5G22250 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein |
CCR4- associated factor 1b, CCR4- associated factor 1b |
-0.63 | 0.31 | -0.32 | ||
22 | AT2G22880 | VQ motif-containing protein | -0.63 | 0.33 | -0.33 | |||
23 | AT1G63090 | phloem protein 2-A11 | phloem protein 2-A11, phloem protein 2-A11 |
-0.63 | 0.31 | -0.31 | ||
24 | AT1G76650 | calmodulin-like 38 | calmodulin-like 38 | -0.63 | 0.3 | -0.32 | ||
25 | AT5G08450 | CONTAINS InterPro DOMAIN/s: Histone deacetylation protein Rxt3 (InterPro:IPR013951); Has 34444 Blast hits to 20801 proteins in 1175 species: Archae - 64; Bacteria - 2390; Metazoa - 15568; Fungi - 3729; Plants - 1886; Viruses - 208; Other Eukaryotes - 10599 (source: NCBI BLink). |
0.63 | 0.32 | -0.29 | |||
26 | AT1G77720 | putative protein kinase 1 | putative protein kinase 1 | 0.63 | 0.3 | -0.33 | ||
27 | AT1G21700 | SWITCH/sucrose nonfermenting 3C | SWITCH/sucrose nonfermenting 3C, CHB4, SWITCH/sucrose nonfermenting 3C |
0.62 | 0.31 | -0.32 | ||
28 | AT1G73100 | SU(VAR)3-9 homolog 3 | SET DOMAIN PROTEIN 19, SU(VAR)3-9 homolog 3 |
0.61 | 0.31 | -0.32 | ||
29 | AT4G14615 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2346 (InterPro:IPR018625); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52825.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.61 | 0.32 | -0.33 | |||
30 | AT2G47850 | Zinc finger C-x8-C-x5-C-x3-H type family protein | 0.61 | 0.34 | -0.29 | |||
31 | AT4G30530 | Class I glutamine amidotransferase-like superfamily protein | gamma-glutamyl peptidase 1 | -0.61 | 0.33 | -0.33 | ||
32 | AT4G26540 | Leucine-rich repeat receptor-like protein kinase family protein |
0.61 | 0.32 | -0.31 | |||
33 | AT1G08600 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
ATRX, CHR20 | 0.61 | 0.32 | -0.31 | ||
34 | AT5G47910 | respiratory burst oxidase homologue D | ATRBOHD, respiratory burst oxidase homologue D |
-0.61 | 0.31 | -0.29 | ||
35 | AT2G34690 | Glycolipid transfer protein (GLTP) family protein | ACCELERATED CELL DEATH 11 | -0.61 | 0.31 | -0.29 | ||
36 | AT5G67300 | myb domain protein r1 | ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 44, ATMYBR1, MYB44, myb domain protein r1 |
-0.61 | 0.3 | -0.34 | ||
37 | AT4G17150 | alpha/beta-Hydrolases superfamily protein | 0.6 | 0.33 | -0.31 | |||
38 | AT2G25735 | unknown protein; Has 31 Blast hits to 31 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.6 | 0.3 | -0.29 | |||
39 | AT1G05630 | Endonuclease/exonuclease/phosphatase family protein | 5PTASE13, AT5PTASE13 | 0.6 | 0.3 | -0.32 | ||
40 | AT5G46070 | Guanylate-binding family protein | 0.6 | 0.32 | -0.33 | |||
41 | AT5G61220 | LYR family of Fe/S cluster biogenesis protein | -0.6 | 0.31 | -0.33 | |||
42 | AT1G23820 | spermidine synthase 1 | spermidine synthase 1 | -0.6 | 0.31 | -0.29 | ||
43 | AT2G20290 | myosin-like protein XIG | MYOSIN XI G, myosin-like protein XIG |
0.59 | 0.33 | -0.31 | ||
44 | AT5G46030 | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF701, zinc-binding putative (InterPro:IPR007808); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.59 | 0.32 | -0.29 | |||
45 | AT1G53990 | GDSL-motif lipase 3 | GDSL-motif lipase 3 | -0.59 | 0.34 | -0.29 | ||
46 | AT2G23770 | protein kinase family protein / peptidoglycan-binding LysM domain-containing protein |
-0.59 | 0.34 | -0.31 | |||
47 | AT1G75710 | C2H2-like zinc finger protein | 0.59 | 0.29 | -0.32 | |||
48 | AT1G80860 | phospholipid N-methyltransferase | ARABIDOPSIS PHOSPHOLIPID N-METHYLTRANSFERASE, phospholipid N-methyltransferase |
-0.59 | 0.31 | -0.3 | ||
49 | AT5G19840 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
0.59 | 0.31 | -0.31 | |||
50 | AT4G23410 | tetraspanin5 | tetraspanin5 | -0.59 | 0.3 | -0.32 | ||
51 | AT1G05575 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: anaerobic respiration; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G31945.1); Has 63 Blast hits to 63 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.59 | 0.32 | -0.3 | |||
52 | AT1G69680 | Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein |
-0.59 | 0.33 | -0.32 | |||
53 | AT1G22310 | methyl-CPG-binding domain 8 | ATMBD8, methyl-CPG-binding domain 8 |
0.59 | 0.32 | -0.31 | ||
54 | AT4G24350 | Phosphorylase superfamily protein | -0.58 | 0.32 | -0.33 | |||
55 | AT2G33440 | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.58 | 0.31 | -0.32 | |||
56 | AT1G19670 | chlorophyllase 1 | chlorophyllase 1, CORONATINE-INDUCED PROTEIN 1, chlorophyllase 1, CORONATINE-INDUCED PROTEIN 1 |
-0.58 | 0.33 | -0.3 | ||
57 | AT1G05460 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
SILENCING DEFECTIVE | 0.58 | 0.3 | -0.32 | ||
58 | AT1G21730 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
0.58 | 0.32 | -0.31 | |||
59 | AT3G01460 | methyl-CPG-binding domain 9 | ATMBD9, methyl-CPG-binding domain 9 |
0.58 | 0.3 | -0.31 | ||
60 | AT1G28370 | ERF domain protein 11 | ERF DOMAIN PROTEIN 11, ERF domain protein 11 |
-0.58 | 0.31 | -0.3 | ||
61 | AT1G72810 | Pyridoxal-5'-phosphate-dependent enzyme family protein | 0.58 | 0.32 | -0.3 | |||
62 | AT3G10180 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
0.58 | 0.32 | -0.32 | |||
63 | AT3G26560 | ATP-dependent RNA helicase, putative | 0.57 | 0.33 | -0.32 | |||
64 | AT2G29090 | cytochrome P450, family 707, subfamily A, polypeptide 2 | cytochrome P450, family 707, subfamily A, polypeptide 2 |
0.57 | 0.29 | -0.29 | ||
65 | AT5G14960 | DP-E2F-like 2 | DP-E2F-like 2, E2FD, E2L1 | 0.57 | 0.32 | -0.29 | ||
66 | AT4G08690 | Sec14p-like phosphatidylinositol transfer family protein | -0.57 | 0.3 | -0.31 | |||
67 | AT2G24550 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G31510.1); Has 219 Blast hits to 219 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 16; Fungi - 2; Plants - 184; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). |
-0.57 | 0.32 | -0.33 | |||
68 | AT5G04110 | DNA GYRASE B3 | DNA GYRASE B3 | 0.57 | 0.33 | -0.31 | ||
69 | AT1G68340 | Protein of unknown function (DUF1639) | -0.57 | 0.31 | -0.34 | |||
70 | AT1G43850 | SEUSS transcriptional co-regulator | seuss | 0.57 | 0.32 | -0.3 | ||
71 | AT2G45340 | Leucine-rich repeat protein kinase family protein | 0.57 | 0.31 | -0.34 | |||
72 | AT4G33630 | Protein of unknown function (DUF3506) | EXECUTER1 | 0.57 | 0.31 | -0.31 | ||
73 | AT5G50370 | Adenylate kinase family protein | -0.57 | 0.32 | -0.32 | |||
74 | AT2G44990 | carotenoid cleavage dioxygenase 7 | ATCCD7, carotenoid cleavage dioxygenase 7, MAX3 |
0.57 | 0.32 | -0.31 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
75 | C0185 | MST_3139.9 | - | - | - | -0.61 | 0.43 | -0.46 |